Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm26468-201ENSMUST00000158644 106 ntBASIC0.98□□□□□ -2.25
Trim40Q3UWA4 Gm24221-201ENSMUST00000158833 313 ntBASIC0.98□□□□□ -2.25
Trim40Q3UWA4 Gm42988-201ENSMUST00000198116 225 ntBASIC0.98□□□□□ -2.25
Trim40Q3UWA4 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
Trim40Q3UWA4 Snord82-201ENSMUST00000082889 70 ntBASIC0.98□□□□□ -2.25
Trim40Q3UWA4 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC0.98□□□□□ -2.25
Trim40Q3UWA4 Gm26080-201ENSMUST00000104069 131 ntBASIC0.97□□□□□ -2.25
Trim40Q3UWA4 Gm14568-201ENSMUST00000119321 294 ntBASIC0.97□□□□□ -2.25
Trim40Q3UWA4 Gm23083-201ENSMUST00000157851 116 ntBASIC0.97□□□□□ -2.25
Trim40Q3UWA4 Gm23114-201ENSMUST00000158478 117 ntBASIC0.97□□□□□ -2.25
Trim40Q3UWA4 Gm22200-201ENSMUST00000158614 67 ntBASIC0.97□□□□□ -2.25
Trim40Q3UWA4 Gm26160-201ENSMUST00000158965 63 ntBASIC0.97□□□□□ -2.25
Trim40Q3UWA4 Mir6381-201ENSMUST00000183426 87 ntBASIC0.97□□□□□ -2.25
Trim40Q3UWA4 Gm27420-201ENSMUST00000183823 79 ntBASIC0.97□□□□□ -2.25
Trim40Q3UWA4 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC0.97□□□□□ -2.25
Trim40Q3UWA4 Gm44396-201ENSMUST00000199843 114 ntBASIC0.97□□□□□ -2.25
Trim40Q3UWA4 Gm45471-201ENSMUST00000211270 281 ntBASIC0.97□□□□□ -2.25
Trim40Q3UWA4 Snora20-201ENSMUST00000082703 128 ntBASIC0.97□□□□□ -2.25
Trim40Q3UWA4 Mir218-1-201ENSMUST00000083669 110 ntBASIC0.97□□□□□ -2.25
Trim40Q3UWA4 Mir451a-201ENSMUST00000093557 72 ntBASIC0.97□□□□□ -2.25
Trim40Q3UWA4 Gm24640-201ENSMUST00000116949 126 ntBASIC0.96□□□□□ -2.26
Trim40Q3UWA4 Gm22626-201ENSMUST00000116990 126 ntBASIC0.96□□□□□ -2.26
Trim40Q3UWA4 Gm25838-201ENSMUST00000158920 120 ntBASIC0.96□□□□□ -2.26
Trim40Q3UWA4 Gm24761-201ENSMUST00000179589 127 ntBASIC0.96□□□□□ -2.26
Trim40Q3UWA4 Gm24488-201ENSMUST00000179934 127 ntBASIC0.96□□□□□ -2.26
Trim40Q3UWA4 Gm25701-201ENSMUST00000179988 127 ntBASIC0.96□□□□□ -2.26
Trim40Q3UWA4 Gm26431-201ENSMUST00000180199 127 ntBASIC0.96□□□□□ -2.26
Trim40Q3UWA4 Gm28256-201ENSMUST00000188953 139 ntBASIC0.96□□□□□ -2.26
Trim40Q3UWA4 Gm28559-201ENSMUST00000190532 139 ntBASIC0.96□□□□□ -2.26
Trim40Q3UWA4 Gm37586-201ENSMUST00000193654 204 ntBASIC0.96□□□□□ -2.26
Trim40Q3UWA4 Gm19790-201ENSMUST00000214414 251 ntBASIC0.96□□□□□ -2.26
Trim40Q3UWA4 Gm13922-201ENSMUST00000119505 156 ntBASIC0.95□□□□□ -2.26
Trim40Q3UWA4 Gm26090-201ENSMUST00000157897 128 ntBASIC0.95□□□□□ -2.26
Trim40Q3UWA4 Gm24880-201ENSMUST00000158776 85 ntBASIC0.95□□□□□ -2.26
Trim40Q3UWA4 Gm16539-201ENSMUST00000160086 327 ntBASIC0.95□□□□□ -2.26
Trim40Q3UWA4 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC0.95□□□□□ -2.26
Trim40Q3UWA4 Gm27672-201ENSMUST00000183751 204 ntBASIC0.95□□□□□ -2.26
Trim40Q3UWA4 Gm27365-201ENSMUST00000184041 177 ntBASIC0.95□□□□□ -2.26
Trim40Q3UWA4 Gm38274-201ENSMUST00000195689 148 ntBASIC0.95□□□□□ -2.26
Trim40Q3UWA4 Gm25851-201ENSMUST00000082794 107 ntBASIC0.95□□□□□ -2.26
Trim40Q3UWA4 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
Trim40Q3UWA4 Gm24132-201ENSMUST00000104745 91 ntBASIC0.94□□□□□ -2.26
Trim40Q3UWA4 Gm6952-201ENSMUST00000118629 159 ntBASIC0.94□□□□□ -2.26
Trim40Q3UWA4 Gm26029-201ENSMUST00000158659 132 ntBASIC0.94□□□□□ -2.26
Trim40Q3UWA4 Gm22914-201ENSMUST00000175195 77 ntBASIC0.94□□□□□ -2.26
Trim40Q3UWA4 Gm38364-201ENSMUST00000191814 179 ntBASIC0.94□□□□□ -2.26
Trim40Q3UWA4 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC0.94□□□□□ -2.26
Trim40Q3UWA4 Gm43898-201ENSMUST00000204456 424 ntBASIC0.94□□□□□ -2.26
Trim40Q3UWA4 Mir186-201ENSMUST00000083497 71 ntBASIC0.94□□□□□ -2.26
Trim40Q3UWA4 Gm25683-201ENSMUST00000083940 131 ntBASIC0.94□□□□□ -2.26
Trim40Q3UWA4 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC0.94□□□□□ -2.26
Trim40Q3UWA4 Snord100-201ENSMUST00000116836 74 ntBASIC0.93□□□□□ -2.26
Trim40Q3UWA4 Gm23893-201ENSMUST00000158106 134 ntBASIC0.93□□□□□ -2.26
Trim40Q3UWA4 Gm23852-201ENSMUST00000158376 77 ntBASIC0.93□□□□□ -2.26
Trim40Q3UWA4 Mir3098-201ENSMUST00000175416 87 ntBASIC0.93□□□□□ -2.26
Trim40Q3UWA4 Mir22-201ENSMUST00000083595 95 ntBASIC0.93□□□□□ -2.26
Trim40Q3UWA4 Gm24276-201ENSMUST00000102181 110 ntBASIC0.92□□□□□ -2.26
Trim40Q3UWA4 Snord70-201ENSMUST00000104157 87 ntBASIC0.92□□□□□ -2.26
Trim40Q3UWA4 Gm12771-201ENSMUST00000120246 135 ntBASIC0.92□□□□□ -2.26
Trim40Q3UWA4 Snora24-201ENSMUST00000174989 130 ntBASIC0.92□□□□□ -2.26
Trim40Q3UWA4 Gm16404-201ENSMUST00000177739 468 ntBASIC0.92□□□□□ -2.26
Trim40Q3UWA4 Gm14598-201ENSMUST00000180109 468 ntBASIC0.92□□□□□ -2.26
Trim40Q3UWA4 Gm14625-201ENSMUST00000180231 468 ntBASIC0.92□□□□□ -2.26
Trim40Q3UWA4 Mir6380-201ENSMUST00000184334 81 ntBASIC0.92□□□□□ -2.26
Trim40Q3UWA4 AC134601.1-201ENSMUST00000221058 109 ntBASIC0.92□□□□□ -2.26
Trim40Q3UWA4 Mir219a-2-201ENSMUST00000083551 97 ntBASIC0.92□□□□□ -2.26
Trim40Q3UWA4 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC0.92□□□□□ -2.26
Trim40Q3UWA4 Gm24431-201ENSMUST00000104073 66 ntBASIC0.91□□□□□ -2.26
Trim40Q3UWA4 Gm22780-201ENSMUST00000104084 132 ntBASIC0.91□□□□□ -2.26
Trim40Q3UWA4 Gm14567-201ENSMUST00000117155 174 ntBASIC0.91□□□□□ -2.26
Trim40Q3UWA4 Gm22425-201ENSMUST00000158532 138 ntBASIC0.91□□□□□ -2.26
Trim40Q3UWA4 Gm25771-201ENSMUST00000158565 144 ntBASIC0.91□□□□□ -2.26
Trim40Q3UWA4 Gm22259-201ENSMUST00000178926 107 ntBASIC0.91□□□□□ -2.26
Trim40Q3UWA4 Gm28794-201ENSMUST00000185276 136 ntBASIC0.91□□□□□ -2.26
Trim40Q3UWA4 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC0.91□□□□□ -2.26
Trim40Q3UWA4 Snord35a-201ENSMUST00000083884 90 ntBASIC0.91□□□□□ -2.26
Trim40Q3UWA4 AC127302.3-201ENSMUST00000215480 2791 ntBASIC0.91□□□□□ -2.26
Trim40Q3UWA4 Gm25011-201ENSMUST00000158398 126 ntBASIC0.9□□□□□ -2.27
Trim40Q3UWA4 Gm27694-201ENSMUST00000184740 86 ntBASIC0.9□□□□□ -2.27
Trim40Q3UWA4 AC139186.1-201ENSMUST00000197610 94 ntBASIC0.9□□□□□ -2.27
Trim40Q3UWA4 Gm44976-201ENSMUST00000205543 261 ntBASIC0.9□□□□□ -2.27
Trim40Q3UWA4 Gm45002-201ENSMUST00000208045 120 ntBASIC0.9□□□□□ -2.27
Trim40Q3UWA4 Gm13345-201ENSMUST00000121928 228 ntBASIC0.89□□□□□ -2.27
Trim40Q3UWA4 Gm25044-201ENSMUST00000158603 104 ntBASIC0.89□□□□□ -2.27
Trim40Q3UWA4 Gm23289-201ENSMUST00000175615 108 ntBASIC0.89□□□□□ -2.27
Trim40Q3UWA4 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
Trim40Q3UWA4 Mir468-201ENSMUST00000197332 78 ntBASIC0.89□□□□□ -2.27
Trim40Q3UWA4 Mir1a-2-201ENSMUST00000198520 72 ntBASIC0.89□□□□□ -2.27
Trim40Q3UWA4 Gm22809-201ENSMUST00000082743 156 ntBASIC0.89□□□□□ -2.27
Trim40Q3UWA4 Gm24252-201ENSMUST00000083700 132 ntBASIC0.89□□□□□ -2.27
Trim40Q3UWA4 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC0.88□□□□□ -2.27
Trim40Q3UWA4 Gm23130-201ENSMUST00000104252 74 ntBASIC0.88□□□□□ -2.27
Trim40Q3UWA4 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
Trim40Q3UWA4 AC192091.2-201ENSMUST00000217869 117 ntBASIC0.88□□□□□ -2.27
Trim40Q3UWA4 Gm26326-201ENSMUST00000083070 129 ntBASIC0.88□□□□□ -2.27
Trim40Q3UWA4 Mir343-201ENSMUST00000102360 75 ntBASIC0.87□□□□□ -2.27
Trim40Q3UWA4 Gm22544-201ENSMUST00000104349 127 ntBASIC0.87□□□□□ -2.27
Trim40Q3UWA4 Gm22850-201ENSMUST00000157714 82 ntBASIC0.87□□□□□ -2.27
Trim40Q3UWA4 Gm22515-201ENSMUST00000158273 305 ntBASIC0.87□□□□□ -2.27
Trim40Q3UWA4 Mir1961-201ENSMUST00000158643 112 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 76,532 protein–RNA pairs in 134 ms