Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Gm25610-201ENSMUST00000104016 129 ntBASIC2.35□□□□□ -2.03
Shisa3Q3UPR0 Gm25270-201ENSMUST00000122606 138 ntBASIC2.35□□□□□ -2.03
Shisa3Q3UPR0 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC2.35□□□□□ -2.03
Shisa3Q3UPR0 Gm23391-201ENSMUST00000157579 104 ntBASIC2.35□□□□□ -2.03
Shisa3Q3UPR0 Gm20477-201ENSMUST00000174028 280 ntBASIC2.35□□□□□ -2.03
Shisa3Q3UPR0 AC134601.3-201ENSMUST00000221682 154 ntBASIC2.35□□□□□ -2.03
Shisa3Q3UPR0 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Shisa3Q3UPR0 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
Shisa3Q3UPR0 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
Shisa3Q3UPR0 Gm18795-202ENSMUST00000223373 2920 ntBASIC2.34□□□□□ -2.03
Shisa3Q3UPR0 Gm25168-201ENSMUST00000104189 132 ntBASIC2.34□□□□□ -2.03
Shisa3Q3UPR0 Gm23986-201ENSMUST00000157144 63 ntBASIC2.34□□□□□ -2.03
Shisa3Q3UPR0 Gm23601-201ENSMUST00000157259 131 ntBASIC2.34□□□□□ -2.03
Shisa3Q3UPR0 Gm24082-201ENSMUST00000175175 83 ntBASIC2.34□□□□□ -2.03
Shisa3Q3UPR0 Gm24350-202ENSMUST00000198309 132 ntBASIC2.34□□□□□ -2.03
Shisa3Q3UPR0 Gm25788-201ENSMUST00000082721 131 ntBASIC2.34□□□□□ -2.03
Shisa3Q3UPR0 Gm23790-201ENSMUST00000083013 107 ntBASIC2.34□□□□□ -2.03
Shisa3Q3UPR0 Gm22827-201ENSMUST00000083766 107 ntBASIC2.34□□□□□ -2.03
Shisa3Q3UPR0 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC2.34□□□□□ -2.04
Shisa3Q3UPR0 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.34□□□□□ -2.04
Shisa3Q3UPR0 Snora36b-201ENSMUST00000104383 132 ntBASIC2.33□□□□□ -2.04
Shisa3Q3UPR0 Gm25539-201ENSMUST00000116886 122 ntBASIC2.33□□□□□ -2.04
Shisa3Q3UPR0 Fau-ps1-201ENSMUST00000119675 252 ntBASIC2.33□□□□□ -2.04
Shisa3Q3UPR0 Gm23668-201ENSMUST00000157465 111 ntBASIC2.33□□□□□ -2.04
Shisa3Q3UPR0 Gm25066-201ENSMUST00000158145 123 ntBASIC2.33□□□□□ -2.04
Shisa3Q3UPR0 Mir7k-201ENSMUST00000184115 110 ntBASIC2.33□□□□□ -2.04
Shisa3Q3UPR0 Gm3724-201ENSMUST00000197957 349 ntBASIC2.33□□□□□ -2.04
Shisa3Q3UPR0 AC163289.1-201ENSMUST00000215919 262 ntBASIC2.33□□□□□ -2.04
Shisa3Q3UPR0 Gm22454-201ENSMUST00000082583 107 ntBASIC2.33□□□□□ -2.04
Shisa3Q3UPR0 Gm26458-201ENSMUST00000082832 128 ntBASIC2.33□□□□□ -2.04
Shisa3Q3UPR0 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Shisa3Q3UPR0 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
Shisa3Q3UPR0 Gm25611-201ENSMUST00000104017 133 ntBASIC2.32□□□□□ -2.04
Shisa3Q3UPR0 Gm22782-201ENSMUST00000104082 132 ntBASIC2.32□□□□□ -2.04
Shisa3Q3UPR0 Gm25680-201ENSMUST00000116917 126 ntBASIC2.32□□□□□ -2.04
Shisa3Q3UPR0 Gm22635-201ENSMUST00000116962 126 ntBASIC2.32□□□□□ -2.04
Shisa3Q3UPR0 Gm24627-201ENSMUST00000122764 138 ntBASIC2.32□□□□□ -2.04
Shisa3Q3UPR0 Gm22815-201ENSMUST00000157451 62 ntBASIC2.32□□□□□ -2.04
Shisa3Q3UPR0 Gm25241-201ENSMUST00000174909 84 ntBASIC2.32□□□□□ -2.04
Shisa3Q3UPR0 Gm26217-201ENSMUST00000175212 84 ntBASIC2.32□□□□□ -2.04
Shisa3Q3UPR0 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC2.32□□□□□ -2.04
Shisa3Q3UPR0 Gm42795-201ENSMUST00000198847 76 ntBASIC2.32□□□□□ -2.04
Shisa3Q3UPR0 Gm43977-201ENSMUST00000203970 189 ntBASIC2.32□□□□□ -2.04
Shisa3Q3UPR0 Gm45471-201ENSMUST00000211270 281 ntBASIC2.32□□□□□ -2.04
Shisa3Q3UPR0 Snora3-201ENSMUST00000083082 132 ntBASIC2.32□□□□□ -2.04
Shisa3Q3UPR0 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Shisa3Q3UPR0 Gm45257-201ENSMUST00000210301 3998 ntBASIC2.31□□□□□ -2.04
Shisa3Q3UPR0 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Shisa3Q3UPR0 Gm23911-201ENSMUST00000104596 134 ntBASIC2.31□□□□□ -2.04
Shisa3Q3UPR0 Gm24475-201ENSMUST00000157435 143 ntBASIC2.31□□□□□ -2.04
Shisa3Q3UPR0 Gm22943-201ENSMUST00000158564 76 ntBASIC2.31□□□□□ -2.04
Shisa3Q3UPR0 Gm26213-201ENSMUST00000158582 110 ntBASIC2.31□□□□□ -2.04
Shisa3Q3UPR0 Mir3086-201ENSMUST00000175072 87 ntBASIC2.31□□□□□ -2.04
Shisa3Q3UPR0 Gm43626-201ENSMUST00000198575 162 ntBASIC2.31□□□□□ -2.04
Shisa3Q3UPR0 Gm30534-201ENSMUST00000217928 207 ntBASIC2.31□□□□□ -2.04
Shisa3Q3UPR0 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC2.31□□□□□ -2.04
Shisa3Q3UPR0 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
Shisa3Q3UPR0 Gm26077-201ENSMUST00000104064 123 ntBASIC2.3□□□□□ -2.04
Shisa3Q3UPR0 Gm22679-201ENSMUST00000116975 100 ntBASIC2.3□□□□□ -2.04
Shisa3Q3UPR0 Gm44393-201ENSMUST00000197418 138 ntBASIC2.3□□□□□ -2.04
Shisa3Q3UPR0 Gm44807-201ENSMUST00000206115 154 ntBASIC2.3□□□□□ -2.04
Shisa3Q3UPR0 AC168266.1-201ENSMUST00000216024 226 ntBASIC2.3□□□□□ -2.04
Shisa3Q3UPR0 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC2.3□□□□□ -2.04
Shisa3Q3UPR0 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Shisa3Q3UPR0 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Shisa3Q3UPR0 Gm23747-201ENSMUST00000104228 131 ntBASIC2.29□□□□□ -2.04
Shisa3Q3UPR0 Gm16021-201ENSMUST00000121176 219 ntBASIC2.29□□□□□ -2.04
Shisa3Q3UPR0 n-R5s39-201ENSMUST00000122613 108 ntBASIC2.29□□□□□ -2.04
Shisa3Q3UPR0 Gm16328-201ENSMUST00000126985 196 ntBASIC2.29□□□□□ -2.04
Shisa3Q3UPR0 Gm25750-201ENSMUST00000175483 112 ntBASIC2.29□□□□□ -2.04
Shisa3Q3UPR0 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC2.29□□□□□ -2.04
Shisa3Q3UPR0 AC124537.1-201ENSMUST00000222890 159 ntBASIC2.29□□□□□ -2.04
Shisa3Q3UPR0 Gm26123-201ENSMUST00000083363 135 ntBASIC2.29□□□□□ -2.04
Shisa3Q3UPR0 Gm43753-201ENSMUST00000196539 3309 ntBASIC2.29□□□□□ -2.04
Shisa3Q3UPR0 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC2.28□□□□□ -2.04
Shisa3Q3UPR0 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
Shisa3Q3UPR0 Gm11248-201ENSMUST00000119568 201 ntBASIC2.28□□□□□ -2.04
Shisa3Q3UPR0 Gm13433-201ENSMUST00000121701 240 ntBASIC2.28□□□□□ -2.04
Shisa3Q3UPR0 Gm22770-201ENSMUST00000158368 67 ntBASIC2.28□□□□□ -2.04
Shisa3Q3UPR0 Mir6379-201ENSMUST00000183392 115 ntBASIC2.28□□□□□ -2.04
Shisa3Q3UPR0 Mir6993-201ENSMUST00000184912 65 ntBASIC2.28□□□□□ -2.04
Shisa3Q3UPR0 AC166341.8-201ENSMUST00000221267 108 ntBASIC2.28□□□□□ -2.04
Shisa3Q3UPR0 Gm22249-201ENSMUST00000082485 136 ntBASIC2.28□□□□□ -2.04
Shisa3Q3UPR0 Gm22884-201ENSMUST00000083127 140 ntBASIC2.28□□□□□ -2.04
Shisa3Q3UPR0 Mir300-201ENSMUST00000083485 79 ntBASIC2.28□□□□□ -2.04
Shisa3Q3UPR0 Gm22354-201ENSMUST00000083919 70 ntBASIC2.28□□□□□ -2.04
Shisa3Q3UPR0 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC2.28□□□□□ -2.04
Shisa3Q3UPR0 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
Shisa3Q3UPR0 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Shisa3Q3UPR0 DQ267100-201ENSMUST00000122600 72 ntBASIC2.27□□□□□ -2.05
Shisa3Q3UPR0 Gm25373-201ENSMUST00000158156 115 ntBASIC2.27□□□□□ -2.05
Shisa3Q3UPR0 Gm23349-201ENSMUST00000158432 98 ntBASIC2.27□□□□□ -2.05
Shisa3Q3UPR0 Gm26406-201ENSMUST00000158503 124 ntBASIC2.27□□□□□ -2.05
Shisa3Q3UPR0 Gm26215-201ENSMUST00000158584 139 ntBASIC2.27□□□□□ -2.05
Shisa3Q3UPR0 Gm25976-201ENSMUST00000158695 130 ntBASIC2.27□□□□□ -2.05
Shisa3Q3UPR0 Gm22129-201ENSMUST00000179034 107 ntBASIC2.27□□□□□ -2.05
Shisa3Q3UPR0 Gm22069-201ENSMUST00000179911 107 ntBASIC2.27□□□□□ -2.05
Shisa3Q3UPR0 Mir21c-201ENSMUST00000184910 78 ntBASIC2.27□□□□□ -2.05
Shisa3Q3UPR0 Gm27979-201ENSMUST00000185126 56 ntBASIC2.27□□□□□ -2.05
Shisa3Q3UPR0 Gm14882-201ENSMUST00000117216 218 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 189.1 ms