Protein–RNA interactions for Protein: Q3U4B1

Ssbp4, Single stranded DNA binding protein 4, isoform CRA_b, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp4Q3U4B1 AC164561.1-201ENSMUST00000220414 115 ntBASIC1.33□□□□□ -2.2
Ssbp4Q3U4B1 AC168880.2-201ENSMUST00000224488 201 ntBASIC1.33□□□□□ -2.2
Ssbp4Q3U4B1 Gm26454-201ENSMUST00000082682 107 ntBASIC1.33□□□□□ -2.2
Ssbp4Q3U4B1 Gm44177-201ENSMUST00000204338 2667 ntBASIC1.33□□□□□ -2.2
Ssbp4Q3U4B1 Gm26080-201ENSMUST00000104069 131 ntBASIC1.32□□□□□ -2.2
Ssbp4Q3U4B1 Gm23772-201ENSMUST00000104433 102 ntBASIC1.32□□□□□ -2.2
Ssbp4Q3U4B1 Gm22373-201ENSMUST00000104584 89 ntBASIC1.32□□□□□ -2.2
Ssbp4Q3U4B1 Gm24559-201ENSMUST00000157519 121 ntBASIC1.32□□□□□ -2.2
Ssbp4Q3U4B1 Gm22946-201ENSMUST00000158558 82 ntBASIC1.32□□□□□ -2.2
Ssbp4Q3U4B1 Gm25831-201ENSMUST00000158924 163 ntBASIC1.32□□□□□ -2.2
Ssbp4Q3U4B1 Mir7683-201ENSMUST00000183842 61 ntBASIC1.32□□□□□ -2.2
Ssbp4Q3U4B1 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
Ssbp4Q3U4B1 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC1.32□□□□□ -2.2
Ssbp4Q3U4B1 Gm44859-201ENSMUST00000207831 94 ntBASIC1.32□□□□□ -2.2
Ssbp4Q3U4B1 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC1.32□□□□□ -2.2
Ssbp4Q3U4B1 Gm23100-201ENSMUST00000083455 141 ntBASIC1.32□□□□□ -2.2
Ssbp4Q3U4B1 Mir320-201ENSMUST00000083594 82 ntBASIC1.32□□□□□ -2.2
Ssbp4Q3U4B1 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC1.31□□□□□ -2.2
Ssbp4Q3U4B1 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
Ssbp4Q3U4B1 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
Ssbp4Q3U4B1 Gm24232-201ENSMUST00000104314 132 ntBASIC1.31□□□□□ -2.2
Ssbp4Q3U4B1 Gm14671-201ENSMUST00000121790 262 ntBASIC1.31□□□□□ -2.2
Ssbp4Q3U4B1 n-R5s188-201ENSMUST00000122646 105 ntBASIC1.31□□□□□ -2.2
Ssbp4Q3U4B1 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC1.31□□□□□ -2.2
Ssbp4Q3U4B1 Gm24902-201ENSMUST00000158126 123 ntBASIC1.31□□□□□ -2.2
Ssbp4Q3U4B1 Gm24676-201ENSMUST00000158758 75 ntBASIC1.31□□□□□ -2.2
Ssbp4Q3U4B1 Trav5d-3-201ENSMUST00000170041 270 ntBASIC1.31□□□□□ -2.2
Ssbp4Q3U4B1 Gm16976-205ENSMUST00000227324 226 ntBASIC1.31□□□□□ -2.2
Ssbp4Q3U4B1 Gm25136-201ENSMUST00000083253 115 ntBASIC1.31□□□□□ -2.2
Ssbp4Q3U4B1 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
Ssbp4Q3U4B1 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.3□□□□□ -2.2
Ssbp4Q3U4B1 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
Ssbp4Q3U4B1 Gm26074-201ENSMUST00000104063 129 ntBASIC1.3□□□□□ -2.2
Ssbp4Q3U4B1 Gm25878-201ENSMUST00000104327 93 ntBASIC1.3□□□□□ -2.2
Ssbp4Q3U4B1 Gm22545-201ENSMUST00000104350 132 ntBASIC1.3□□□□□ -2.2
Ssbp4Q3U4B1 Gm23337-201ENSMUST00000158959 118 ntBASIC1.3□□□□□ -2.2
Ssbp4Q3U4B1 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC1.3□□□□□ -2.2
Ssbp4Q3U4B1 Mir3057-201ENSMUST00000175040 91 ntBASIC1.3□□□□□ -2.2
Ssbp4Q3U4B1 Gm25958-201ENSMUST00000175114 71 ntBASIC1.3□□□□□ -2.2
Ssbp4Q3U4B1 Gm25730-201ENSMUST00000178753 165 ntBASIC1.3□□□□□ -2.2
Ssbp4Q3U4B1 Gm44464-201ENSMUST00000198010 138 ntBASIC1.3□□□□□ -2.2
Ssbp4Q3U4B1 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.3□□□□□ -2.2
Ssbp4Q3U4B1 AC164612.2-202ENSMUST00000216314 253 ntBASIC1.3□□□□□ -2.2
Ssbp4Q3U4B1 Gm18502-201ENSMUST00000218679 199 ntBASIC1.3□□□□□ -2.2
Ssbp4Q3U4B1 AL627387.1-201ENSMUST00000226063 250 ntBASIC1.3□□□□□ -2.2
Ssbp4Q3U4B1 Mir490-201ENSMUST00000093567 84 ntBASIC1.3□□□□□ -2.2
Ssbp4Q3U4B1 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
Ssbp4Q3U4B1 Gm22228-201ENSMUST00000157364 101 ntBASIC1.29□□□□□ -2.2
Ssbp4Q3U4B1 Gm22387-201ENSMUST00000158191 131 ntBASIC1.29□□□□□ -2.2
Ssbp4Q3U4B1 Gm27934-201ENSMUST00000158795 63 ntBASIC1.29□□□□□ -2.2
Ssbp4Q3U4B1 Gm26004-201ENSMUST00000158804 116 ntBASIC1.29□□□□□ -2.2
Ssbp4Q3U4B1 Mir3471-1-201ENSMUST00000175139 131 ntBASIC1.29□□□□□ -2.2
Ssbp4Q3U4B1 Gm23567-201ENSMUST00000178005 107 ntBASIC1.29□□□□□ -2.2
Ssbp4Q3U4B1 Gm25936-201ENSMUST00000179952 114 ntBASIC1.29□□□□□ -2.2
Ssbp4Q3U4B1 Gm37545-201ENSMUST00000186512 148 ntBASIC1.29□□□□□ -2.2
Ssbp4Q3U4B1 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.29□□□□□ -2.2
Ssbp4Q3U4B1 Gm23377-201ENSMUST00000082943 126 ntBASIC1.29□□□□□ -2.2
Ssbp4Q3U4B1 Mir221-201ENSMUST00000083488 95 ntBASIC1.29□□□□□ -2.2
Ssbp4Q3U4B1 Gm25409-201ENSMUST00000083764 131 ntBASIC1.29□□□□□ -2.2
Ssbp4Q3U4B1 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
Ssbp4Q3U4B1 Gm22105-201ENSMUST00000116734 116 ntBASIC1.28□□□□□ -2.2
Ssbp4Q3U4B1 Gm15115-201ENSMUST00000121145 264 ntBASIC1.28□□□□□ -2.2
Ssbp4Q3U4B1 Gm22381-201ENSMUST00000158186 107 ntBASIC1.28□□□□□ -2.2
Ssbp4Q3U4B1 Gm23208-201ENSMUST00000158666 127 ntBASIC1.28□□□□□ -2.2
Ssbp4Q3U4B1 Gm24167-201ENSMUST00000177733 124 ntBASIC1.28□□□□□ -2.2
Ssbp4Q3U4B1 Gm22862-201ENSMUST00000178593 121 ntBASIC1.28□□□□□ -2.2
Ssbp4Q3U4B1 Gm24028-201ENSMUST00000178991 124 ntBASIC1.28□□□□□ -2.2
Ssbp4Q3U4B1 Mir7039-201ENSMUST00000183852 85 ntBASIC1.28□□□□□ -2.2
Ssbp4Q3U4B1 Gm44976-201ENSMUST00000205543 261 ntBASIC1.28□□□□□ -2.2
Ssbp4Q3U4B1 Gm8219-201ENSMUST00000218309 242 ntBASIC1.28□□□□□ -2.2
Ssbp4Q3U4B1 Gm25812-201ENSMUST00000082751 103 ntBASIC1.28□□□□□ -2.2
Ssbp4Q3U4B1 Gm23722-201ENSMUST00000083002 130 ntBASIC1.28□□□□□ -2.2
Ssbp4Q3U4B1 Mir201-201ENSMUST00000083470 66 ntBASIC1.28□□□□□ -2.2
Ssbp4Q3U4B1 Gm23947-201ENSMUST00000093636 107 ntBASIC1.28□□□□□ -2.2
Ssbp4Q3U4B1 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC1.28□□□□□ -2.2
Ssbp4Q3U4B1 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
Ssbp4Q3U4B1 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.27□□□□□ -2.21
Ssbp4Q3U4B1 Mir653-201ENSMUST00000102402 85 ntBASIC1.27□□□□□ -2.21
Ssbp4Q3U4B1 n-R5s73-201ENSMUST00000122508 107 ntBASIC1.27□□□□□ -2.21
Ssbp4Q3U4B1 Gm25882-201ENSMUST00000157784 85 ntBASIC1.27□□□□□ -2.21
Ssbp4Q3U4B1 Gm23558-201ENSMUST00000157823 80 ntBASIC1.27□□□□□ -2.21
Ssbp4Q3U4B1 Gm25920-201ENSMUST00000158307 99 ntBASIC1.27□□□□□ -2.21
Ssbp4Q3U4B1 Gm26291-201ENSMUST00000158889 137 ntBASIC1.27□□□□□ -2.21
Ssbp4Q3U4B1 Gm24366-201ENSMUST00000175383 86 ntBASIC1.27□□□□□ -2.21
Ssbp4Q3U4B1 Gm23267-201ENSMUST00000178490 132 ntBASIC1.27□□□□□ -2.21
Ssbp4Q3U4B1 Mir3969-201ENSMUST00000197106 92 ntBASIC1.27□□□□□ -2.21
Ssbp4Q3U4B1 Gm44470-201ENSMUST00000203913 142 ntBASIC1.27□□□□□ -2.21
Ssbp4Q3U4B1 Gm45544-201ENSMUST00000211130 88 ntBASIC1.27□□□□□ -2.21
Ssbp4Q3U4B1 mt-Ta-201ENSMUST00000082398 69 ntBASIC1.27□□□□□ -2.21
Ssbp4Q3U4B1 Gm23239-201ENSMUST00000083006 181 ntBASIC1.27□□□□□ -2.21
Ssbp4Q3U4B1 Gm22743-201ENSMUST00000083445 133 ntBASIC1.27□□□□□ -2.21
Ssbp4Q3U4B1 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
Ssbp4Q3U4B1 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC1.26□□□□□ -2.21
Ssbp4Q3U4B1 Gm25980-201ENSMUST00000157176 218 ntBASIC1.26□□□□□ -2.21
Ssbp4Q3U4B1 Snord13-201ENSMUST00000157627 104 ntBASIC1.26□□□□□ -2.21
Ssbp4Q3U4B1 Gm26415-201ENSMUST00000157673 292 ntBASIC1.26□□□□□ -2.21
Ssbp4Q3U4B1 Gm25364-201ENSMUST00000158851 107 ntBASIC1.26□□□□□ -2.21
Ssbp4Q3U4B1 Gm28794-201ENSMUST00000185276 136 ntBASIC1.26□□□□□ -2.21
Ssbp4Q3U4B1 Gm29613-201ENSMUST00000185846 313 ntBASIC1.26□□□□□ -2.21
Ssbp4Q3U4B1 Gm29544-201ENSMUST00000188860 313 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 167 ms