Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Gm25991-201ENSMUST00000102439 99 ntBASIC0.13□□□□□ -2.39
Shox2P70390 Gm14574-201ENSMUST00000120644 279 ntBASIC0.13□□□□□ -2.39
Shox2P70390 Gm12785-201ENSMUST00000122052 172 ntBASIC0.13□□□□□ -2.39
Shox2P70390 Gm25318-201ENSMUST00000122554 314 ntBASIC0.13□□□□□ -2.39
Shox2P70390 Gm22555-201ENSMUST00000157801 62 ntBASIC0.13□□□□□ -2.39
Shox2P70390 Gm24499-201ENSMUST00000158446 104 ntBASIC0.13□□□□□ -2.39
Shox2P70390 Gm22942-201ENSMUST00000158563 124 ntBASIC0.13□□□□□ -2.39
Shox2P70390 Gm23022-201ENSMUST00000158768 180 ntBASIC0.13□□□□□ -2.39
Shox2P70390 Gm27610-201ENSMUST00000184026 74 ntBASIC0.13□□□□□ -2.39
Shox2P70390 Gm37763-201ENSMUST00000193445 120 ntBASIC0.13□□□□□ -2.39
Shox2P70390 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC0.13□□□□□ -2.39
Shox2P70390 AL935138.1-201ENSMUST00000215309 196 ntBASIC0.13□□□□□ -2.39
Shox2P70390 AC116589.4-201ENSMUST00000222390 216 ntBASIC0.13□□□□□ -2.39
Shox2P70390 Gm23404-201ENSMUST00000082543 97 ntBASIC0.13□□□□□ -2.39
Shox2P70390 Gm26011-201ENSMUST00000104410 104 ntBASIC0.12□□□□□ -2.39
Shox2P70390 Gm13518-201ENSMUST00000120018 233 ntBASIC0.12□□□□□ -2.39
Shox2P70390 Mir6350-201ENSMUST00000183639 105 ntBASIC0.12□□□□□ -2.39
Shox2P70390 Gm38208-201ENSMUST00000192476 114 ntBASIC0.12□□□□□ -2.39
Shox2P70390 Mir3535-201ENSMUST00000197651 147 ntBASIC0.12□□□□□ -2.39
Shox2P70390 AC132615.1-201ENSMUST00000213873 255 ntBASIC0.12□□□□□ -2.39
Shox2P70390 AC122769.2-201ENSMUST00000227248 302 ntBASIC0.12□□□□□ -2.39
Shox2P70390 Gm14400-201ENSMUST00000117234 2135 ntBASIC0.11□□□□□ -2.39
Shox2P70390 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC0.11□□□□□ -2.39
Shox2P70390 Gm14298-201ENSMUST00000139032 237 ntBASIC0.11□□□□□ -2.39
Shox2P70390 Gm16356-201ENSMUST00000143300 169 ntBASIC0.11□□□□□ -2.39
Shox2P70390 Gm25827-201ENSMUST00000157089 107 ntBASIC0.11□□□□□ -2.39
Shox2P70390 Gm22607-201ENSMUST00000158291 105 ntBASIC0.11□□□□□ -2.39
Shox2P70390 Gm23474-201ENSMUST00000158884 75 ntBASIC0.11□□□□□ -2.39
Shox2P70390 Gm22234-201ENSMUST00000174906 65 ntBASIC0.11□□□□□ -2.39
Shox2P70390 Gm25032-201ENSMUST00000175411 84 ntBASIC0.11□□□□□ -2.39
Shox2P70390 Gm28849-201ENSMUST00000188127 174 ntBASIC0.11□□□□□ -2.39
Shox2P70390 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC0.11□□□□□ -2.39
Shox2P70390 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.11□□□□□ -2.39
Shox2P70390 Gm26107-201ENSMUST00000083972 107 ntBASIC0.11□□□□□ -2.39
Shox2P70390 Gm25538-201ENSMUST00000101943 107 ntBASIC0.1□□□□□ -2.39
Shox2P70390 Snord69-201ENSMUST00000104024 80 ntBASIC0.1□□□□□ -2.39
Shox2P70390 Gm25878-201ENSMUST00000104327 93 ntBASIC0.1□□□□□ -2.39
Shox2P70390 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC0.1□□□□□ -2.39
Shox2P70390 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC0.1□□□□□ -2.39
Shox2P70390 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC0.1□□□□□ -2.39
Shox2P70390 Gm26090-201ENSMUST00000157897 128 ntBASIC0.1□□□□□ -2.39
Shox2P70390 Gm23838-201ENSMUST00000158067 162 ntBASIC0.1□□□□□ -2.39
Shox2P70390 Gm25952-201ENSMUST00000175329 74 ntBASIC0.1□□□□□ -2.39
Shox2P70390 Gm12647-201ENSMUST00000118977 265 ntBASIC0.09□□□□□ -2.4
Shox2P70390 Gm24015-201ENSMUST00000157725 232 ntBASIC0.09□□□□□ -2.4
Shox2P70390 Mir3108-201ENSMUST00000175500 79 ntBASIC0.09□□□□□ -2.4
Shox2P70390 Gm37338-201ENSMUST00000191986 127 ntBASIC0.09□□□□□ -2.4
Shox2P70390 Gm45471-201ENSMUST00000211270 281 ntBASIC0.09□□□□□ -2.4
Shox2P70390 AC145736.2-201ENSMUST00000216305 365 ntBASIC0.09□□□□□ -2.4
Shox2P70390 Snord95-201ENSMUST00000082846 68 ntBASIC0.09□□□□□ -2.4
Shox2P70390 Gm22421-201ENSMUST00000083058 107 ntBASIC0.09□□□□□ -2.4
Shox2P70390 Gm22365-201ENSMUST00000093750 117 ntBASIC0.09□□□□□ -2.4
Shox2P70390 Mir672-201ENSMUST00000102331 100 ntBASIC0.08□□□□□ -2.4
Shox2P70390 Mir466f-1-201ENSMUST00000104779 94 ntBASIC0.08□□□□□ -2.4
Shox2P70390 Gm23536-201ENSMUST00000157541 134 ntBASIC0.08□□□□□ -2.4
Shox2P70390 Gm24504-201ENSMUST00000157679 100 ntBASIC0.08□□□□□ -2.4
Shox2P70390 Gm24500-201ENSMUST00000158447 124 ntBASIC0.08□□□□□ -2.4
Shox2P70390 Scarna3a-201ENSMUST00000158911 140 ntBASIC0.08□□□□□ -2.4
Shox2P70390 Gm23059-201ENSMUST00000158978 107 ntBASIC0.08□□□□□ -2.4
Shox2P70390 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC0.08□□□□□ -2.4
Shox2P70390 AC132437.1-201ENSMUST00000218308 320 ntBASIC0.08□□□□□ -2.4
Shox2P70390 CT030645.1-201ENSMUST00000224020 231 ntBASIC0.08□□□□□ -2.4
Shox2P70390 AC129085.1-201ENSMUST00000225263 165 ntBASIC0.08□□□□□ -2.4
Shox2P70390 CT025603.4-201ENSMUST00000225777 413 ntBASIC0.08□□□□□ -2.4
Shox2P70390 Snora20-201ENSMUST00000082703 128 ntBASIC0.08□□□□□ -2.4
Shox2P70390 Gm25929-201ENSMUST00000082784 107 ntBASIC0.08□□□□□ -2.4
Shox2P70390 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC0.08□□□□□ -2.4
Shox2P70390 Gm12771-201ENSMUST00000120246 135 ntBASIC0.07□□□□□ -2.4
Shox2P70390 Gm26415-201ENSMUST00000157673 292 ntBASIC0.07□□□□□ -2.4
Shox2P70390 Gm25882-201ENSMUST00000157784 85 ntBASIC0.07□□□□□ -2.4
Shox2P70390 Gm16307-201ENSMUST00000161269 210 ntBASIC0.07□□□□□ -2.4
Shox2P70390 Gm22239-201ENSMUST00000175220 103 ntBASIC0.07□□□□□ -2.4
Shox2P70390 Gm22466-201ENSMUST00000175278 69 ntBASIC0.07□□□□□ -2.4
Shox2P70390 Gm22887-201ENSMUST00000178586 107 ntBASIC0.07□□□□□ -2.4
Shox2P70390 Mir6342-201ENSMUST00000183870 125 ntBASIC0.07□□□□□ -2.4
Shox2P70390 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC0.07□□□□□ -2.4
Shox2P70390 Mir411-201ENSMUST00000083543 82 ntBASIC0.07□□□□□ -2.4
Shox2P70390 Mir214-201ENSMUST00000083582 110 ntBASIC0.07□□□□□ -2.4
Shox2P70390 Gm26111-201ENSMUST00000083969 106 ntBASIC0.07□□□□□ -2.4
Shox2P70390 Gm15213-201ENSMUST00000122098 216 ntBASIC0.06□□□□□ -2.4
Shox2P70390 Gm23262-201ENSMUST00000158323 168 ntBASIC0.06□□□□□ -2.4
Shox2P70390 Mir3470a-201ENSMUST00000175223 77 ntBASIC0.06□□□□□ -2.4
Shox2P70390 Gm23571-201ENSMUST00000180073 127 ntBASIC0.06□□□□□ -2.4
Shox2P70390 Snora16a-202ENSMUST00000196061 137 ntBASIC0.06□□□□□ -2.4
Shox2P70390 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC0.05□□□□□ -2.4
Shox2P70390 Gm42606-201ENSMUST00000114209 239 ntBASIC0.05□□□□□ -2.4
Shox2P70390 Gm23989-201ENSMUST00000117030 66 ntBASIC0.05□□□□□ -2.4
Shox2P70390 Gm14671-201ENSMUST00000121790 262 ntBASIC0.05□□□□□ -2.4
Shox2P70390 Gm22321-201ENSMUST00000157152 104 ntBASIC0.05□□□□□ -2.4
Shox2P70390 Gm24197-201ENSMUST00000175085 109 ntBASIC0.05□□□□□ -2.4
Shox2P70390 Gm23375-201ENSMUST00000175407 83 ntBASIC0.05□□□□□ -2.4
Shox2P70390 Gm23793-201ENSMUST00000179396 117 ntBASIC0.05□□□□□ -2.4
Shox2P70390 Gm24218-201ENSMUST00000180163 105 ntBASIC0.05□□□□□ -2.4
Shox2P70390 Mir7010-201ENSMUST00000183464 63 ntBASIC0.05□□□□□ -2.4
Shox2P70390 AC141438.3-201ENSMUST00000215632 202 ntBASIC0.05□□□□□ -2.4
Shox2P70390 Gm29818-201ENSMUST00000218070 165 ntBASIC0.05□□□□□ -2.4
Shox2P70390 Gm22595-201ENSMUST00000104250 130 ntBASIC0.04□□□□□ -2.4
Shox2P70390 Gm12797-201ENSMUST00000118645 273 ntBASIC0.04□□□□□ -2.4
Shox2P70390 Gm22387-201ENSMUST00000158191 131 ntBASIC0.04□□□□□ -2.4
Shox2P70390 Gm25703-201ENSMUST00000083123 151 ntBASIC0.04□□□□□ -2.4
Retrieved 100 of 76,532 protein–RNA pairs in 163.5 ms