Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm23988-201ENSMUST00000117034 122 ntBASIC1.46□□□□□ -2.18
NcanP55066 Gm13560-201ENSMUST00000121865 329 ntBASIC1.46□□□□□ -2.18
NcanP55066 Gm25884-201ENSMUST00000157782 62 ntBASIC1.46□□□□□ -2.18
NcanP55066 Gm26358-201ENSMUST00000158215 97 ntBASIC1.46□□□□□ -2.18
NcanP55066 Gm25035-201ENSMUST00000175414 77 ntBASIC1.46□□□□□ -2.18
NcanP55066 Snord82-201ENSMUST00000082889 70 ntBASIC1.46□□□□□ -2.18
NcanP55066 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
NcanP55066 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC1.45□□□□□ -2.18
NcanP55066 Gm22553-201ENSMUST00000157797 295 ntBASIC1.45□□□□□ -2.18
NcanP55066 Gm23665-201ENSMUST00000158054 62 ntBASIC1.45□□□□□ -2.18
NcanP55066 Gm25494-201ENSMUST00000158143 100 ntBASIC1.45□□□□□ -2.18
NcanP55066 Gm25223-201ENSMUST00000158200 110 ntBASIC1.45□□□□□ -2.18
NcanP55066 Gm22767-201ENSMUST00000158365 165 ntBASIC1.45□□□□□ -2.18
NcanP55066 Gm22911-201ENSMUST00000177920 107 ntBASIC1.45□□□□□ -2.18
NcanP55066 AC122242.1-201ENSMUST00000224650 304 ntBASIC1.45□□□□□ -2.18
NcanP55066 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC1.45□□□□□ -2.18
NcanP55066 Gm45265-201ENSMUST00000210852 2497 ntBASIC1.44□□□□□ -2.18
NcanP55066 Gm26339-201ENSMUST00000102368 99 ntBASIC1.44□□□□□ -2.18
NcanP55066 Gm16032-201ENSMUST00000118534 168 ntBASIC1.44□□□□□ -2.18
NcanP55066 Gm25825-201ENSMUST00000157091 124 ntBASIC1.44□□□□□ -2.18
NcanP55066 Gm24750-201ENSMUST00000157843 104 ntBASIC1.44□□□□□ -2.18
NcanP55066 Gm25901-201ENSMUST00000158494 130 ntBASIC1.44□□□□□ -2.18
NcanP55066 Gm27699-201ENSMUST00000183553 180 ntBASIC1.44□□□□□ -2.18
NcanP55066 Gm27465-201ENSMUST00000184290 91 ntBASIC1.44□□□□□ -2.18
NcanP55066 Gm28344-201ENSMUST00000185704 279 ntBASIC1.44□□□□□ -2.18
NcanP55066 Gm42719-201ENSMUST00000197393 355 ntBASIC1.44□□□□□ -2.18
NcanP55066 Gm44384-201ENSMUST00000200208 114 ntBASIC1.44□□□□□ -2.18
NcanP55066 AC126939.3-201ENSMUST00000226061 166 ntBASIC1.44□□□□□ -2.18
NcanP55066 mt-Atp8-201ENSMUST00000082407 204 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
NcanP55066 Gm23208-201ENSMUST00000158666 127 ntBASIC1.43□□□□□ -2.18
NcanP55066 Mir6351-201ENSMUST00000183826 99 ntBASIC1.43□□□□□ -2.18
NcanP55066 Gm27248-201ENSMUST00000184004 166 ntBASIC1.43□□□□□ -2.18
NcanP55066 Gm27517-201ENSMUST00000184347 236 ntBASIC1.43□□□□□ -2.18
NcanP55066 Gm6003-201ENSMUST00000187903 463 ntBASIC1.43□□□□□ -2.18
NcanP55066 AC154994.1-201ENSMUST00000217395 302 ntBASIC1.43□□□□□ -2.18
NcanP55066 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.43□□□□□ -2.18
NcanP55066 Gm22973-201ENSMUST00000083298 191 ntBASIC1.43□□□□□ -2.18
NcanP55066 Gm25895-201ENSMUST00000083714 100 ntBASIC1.43□□□□□ -2.18
NcanP55066 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
NcanP55066 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
NcanP55066 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
NcanP55066 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC1.42□□□□□ -2.18
NcanP55066 Gm23209-201ENSMUST00000158667 110 ntBASIC1.42□□□□□ -2.18
NcanP55066 Gm44962-201ENSMUST00000206460 279 ntBASIC1.42□□□□□ -2.18
NcanP55066 Gm25992-201ENSMUST00000102437 109 ntBASIC1.41□□□□□ -2.18
NcanP55066 Gm22586-201ENSMUST00000157507 122 ntBASIC1.41□□□□□ -2.18
NcanP55066 Gm24366-201ENSMUST00000175383 86 ntBASIC1.41□□□□□ -2.18
NcanP55066 Mir669k-201ENSMUST00000177742 127 ntBASIC1.41□□□□□ -2.18
NcanP55066 Gm25673-201ENSMUST00000179957 127 ntBASIC1.41□□□□□ -2.18
NcanP55066 Gm27265-201ENSMUST00000183559 77 ntBASIC1.41□□□□□ -2.18
NcanP55066 Gm37997-201ENSMUST00000193515 267 ntBASIC1.41□□□□□ -2.18
NcanP55066 Gm22482-201ENSMUST00000122563 359 ntBASIC1.4□□□□□ -2.19
NcanP55066 Gm23170-201ENSMUST00000157158 106 ntBASIC1.4□□□□□ -2.19
NcanP55066 Gm22337-201ENSMUST00000157721 132 ntBASIC1.4□□□□□ -2.19
NcanP55066 Gm24015-201ENSMUST00000157725 232 ntBASIC1.4□□□□□ -2.19
NcanP55066 Gm22989-201ENSMUST00000158313 86 ntBASIC1.4□□□□□ -2.19
NcanP55066 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC1.4□□□□□ -2.19
NcanP55066 Gm20386-201ENSMUST00000174010 132 ntBASIC1.4□□□□□ -2.19
NcanP55066 Mir466m-201ENSMUST00000175052 84 ntBASIC1.4□□□□□ -2.19
NcanP55066 Gm27285-201ENSMUST00000183875 127 ntBASIC1.4□□□□□ -2.19
NcanP55066 Gm29613-201ENSMUST00000185846 313 ntBASIC1.4□□□□□ -2.19
NcanP55066 Gm29544-201ENSMUST00000188860 313 ntBASIC1.4□□□□□ -2.19
NcanP55066 Gm28808-201ENSMUST00000190978 313 ntBASIC1.4□□□□□ -2.19
NcanP55066 Gm37624-201ENSMUST00000193751 219 ntBASIC1.4□□□□□ -2.19
NcanP55066 Gm44322-201ENSMUST00000196830 115 ntBASIC1.4□□□□□ -2.19
NcanP55066 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC1.4□□□□□ -2.19
NcanP55066 Mir211-201ENSMUST00000083651 106 ntBASIC1.4□□□□□ -2.19
NcanP55066 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
NcanP55066 Gm25538-201ENSMUST00000101943 107 ntBASIC1.39□□□□□ -2.19
NcanP55066 Gm23321-201ENSMUST00000104465 126 ntBASIC1.39□□□□□ -2.19
NcanP55066 Gm22051-201ENSMUST00000117002 127 ntBASIC1.39□□□□□ -2.19
NcanP55066 Gm23994-201ENSMUST00000158059 88 ntBASIC1.39□□□□□ -2.19
NcanP55066 Gm38183-201ENSMUST00000193189 205 ntBASIC1.39□□□□□ -2.19
NcanP55066 Gm43199-201ENSMUST00000200019 307 ntBASIC1.39□□□□□ -2.19
NcanP55066 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC1.39□□□□□ -2.19
NcanP55066 Snord14a-201ENSMUST00000082807 87 ntBASIC1.39□□□□□ -2.19
NcanP55066 Gm14917-201ENSMUST00000118872 2105 ntBASIC1.39□□□□□ -2.19
NcanP55066 Gm27047-201ENSMUST00000183072 1819 ntBASIC1.38□□□□□ -2.19
NcanP55066 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
NcanP55066 Gm13577-201ENSMUST00000121365 205 ntBASIC1.38□□□□□ -2.19
NcanP55066 Gm22082-201ENSMUST00000157587 161 ntBASIC1.38□□□□□ -2.19
NcanP55066 Gm24229-201ENSMUST00000158830 118 ntBASIC1.38□□□□□ -2.19
NcanP55066 Mir1a-2-201ENSMUST00000198520 72 ntBASIC1.38□□□□□ -2.19
NcanP55066 Mir721-201ENSMUST00000200230 88 ntBASIC1.38□□□□□ -2.19
NcanP55066 Gm36189-201ENSMUST00000204113 523 ntBASIC1.38□□□□□ -2.19
NcanP55066 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC1.38□□□□□ -2.19
NcanP55066 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
NcanP55066 Snord89-201ENSMUST00000104516 110 ntBASIC1.37□□□□□ -2.19
NcanP55066 Gm14536-201ENSMUST00000118324 138 ntBASIC1.37□□□□□ -2.19
NcanP55066 Gm15027-201ENSMUST00000120922 138 ntBASIC1.37□□□□□ -2.19
NcanP55066 Gm25423-201ENSMUST00000157609 107 ntBASIC1.37□□□□□ -2.19
NcanP55066 Gm24929-201ENSMUST00000083403 139 ntBASIC1.37□□□□□ -2.19
NcanP55066 Mir302d-201ENSMUST00000083513 66 ntBASIC1.37□□□□□ -2.19
NcanP55066 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.37□□□□□ -2.19
NcanP55066 Mir297a-2-201ENSMUST00000103795 90 ntBASIC1.36□□□□□ -2.19
NcanP55066 Gm22048-201ENSMUST00000104721 89 ntBASIC1.36□□□□□ -2.19
NcanP55066 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC1.36□□□□□ -2.19
NcanP55066 Gm24262-201ENSMUST00000157431 144 ntBASIC1.36□□□□□ -2.19
NcanP55066 Gm23278-201ENSMUST00000157911 143 ntBASIC1.36□□□□□ -2.19
NcanP55066 Gm25267-201ENSMUST00000158522 63 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 9.2 ms