Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm25623-201ENSMUST00000157216 108 ntBASIC2.58□□□□□ -2
Rfx1P48377 Gm24246-201ENSMUST00000157315 132 ntBASIC2.58□□□□□ -2
Rfx1P48377 Gm26090-201ENSMUST00000157897 128 ntBASIC2.58□□□□□ -2
Rfx1P48377 Gm23033-201ENSMUST00000157996 134 ntBASIC2.58□□□□□ -2
Rfx1P48377 Mir6928-201ENSMUST00000185166 70 ntBASIC2.58□□□□□ -2
Rfx1P48377 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC2.58□□□□□ -2
Rfx1P48377 Mir497-201ENSMUST00000200557 84 ntBASIC2.58□□□□□ -2
Rfx1P48377 Mir451a-201ENSMUST00000093557 72 ntBASIC2.58□□□□□ -2
Rfx1P48377 Gm15289-201ENSMUST00000117793 244 ntBASIC2.57□□□□□ -2
Rfx1P48377 Gm14588-201ENSMUST00000119895 172 ntBASIC2.57□□□□□ -2
Rfx1P48377 Gm22999-201ENSMUST00000157082 88 ntBASIC2.57□□□□□ -2
Rfx1P48377 Gm24900-201ENSMUST00000158128 134 ntBASIC2.57□□□□□ -2
Rfx1P48377 Gm44481-201ENSMUST00000197288 84 ntBASIC2.57□□□□□ -2
Rfx1P48377 Gm44339-201ENSMUST00000200598 84 ntBASIC2.57□□□□□ -2
Rfx1P48377 AC147101.2-201ENSMUST00000219756 184 ntBASIC2.57□□□□□ -2
Rfx1P48377 Gm26154-201ENSMUST00000102339 96 ntBASIC2.56□□□□□ -2
Rfx1P48377 Gm26076-201ENSMUST00000104065 105 ntBASIC2.56□□□□□ -2
Rfx1P48377 Gm23253-201ENSMUST00000157441 104 ntBASIC2.56□□□□□ -2
Rfx1P48377 Gm22666-201ENSMUST00000158717 164 ntBASIC2.56□□□□□ -2
Rfx1P48377 Gm7258-201ENSMUST00000179317 300 ntBASIC2.56□□□□□ -2
Rfx1P48377 Gm27517-201ENSMUST00000184347 236 ntBASIC2.56□□□□□ -2
Rfx1P48377 Gm28900-201ENSMUST00000185232 156 ntBASIC2.56□□□□□ -2
Rfx1P48377 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.56□□□□□ -2
Rfx1P48377 Gm45268-201ENSMUST00000210046 370 ntBASIC2.56□□□□□ -2
Rfx1P48377 Gm24030-201ENSMUST00000083931 164 ntBASIC2.56□□□□□ -2
Rfx1P48377 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Rfx1P48377 Gm24482-201ENSMUST00000117005 93 ntBASIC2.55□□□□□ -2
Rfx1P48377 Gm22517-201ENSMUST00000158265 136 ntBASIC2.55□□□□□ -2
Rfx1P48377 Gm25367-201ENSMUST00000158846 106 ntBASIC2.55□□□□□ -2
Rfx1P48377 Gm23005-201ENSMUST00000158950 136 ntBASIC2.55□□□□□ -2
Rfx1P48377 Gm22093-201ENSMUST00000158980 111 ntBASIC2.55□□□□□ -2
Rfx1P48377 Mir3057-201ENSMUST00000175040 91 ntBASIC2.55□□□□□ -2
Rfx1P48377 Gm27446-201ENSMUST00000183963 89 ntBASIC2.55□□□□□ -2
Rfx1P48377 Mir378a-201ENSMUST00000198300 66 ntBASIC2.55□□□□□ -2
Rfx1P48377 Mir221-201ENSMUST00000083488 95 ntBASIC2.55□□□□□ -2
Rfx1P48377 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Rfx1P48377 Gm23803-201ENSMUST00000104610 132 ntBASIC2.54□□□□□ -2
Rfx1P48377 Gm22227-201ENSMUST00000157356 259 ntBASIC2.54□□□□□ -2
Rfx1P48377 Gm22708-201ENSMUST00000158987 103 ntBASIC2.54□□□□□ -2
Rfx1P48377 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC2.54□□□□□ -2
Rfx1P48377 Gm24044-201ENSMUST00000083107 156 ntBASIC2.54□□□□□ -2
Rfx1P48377 Gm42855-201ENSMUST00000197388 253 ntBASIC2.53□□□□□ -2
Rfx1P48377 Gm23100-201ENSMUST00000083455 141 ntBASIC2.53□□□□□ -2
Rfx1P48377 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC2.52□□□□□ -2.01
Rfx1P48377 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC2.52□□□□□ -2.01
Rfx1P48377 Gm23172-201ENSMUST00000157160 124 ntBASIC2.52□□□□□ -2.01
Rfx1P48377 Gm24238-201ENSMUST00000157792 98 ntBASIC2.52□□□□□ -2.01
Rfx1P48377 Mir411-201ENSMUST00000083543 82 ntBASIC2.52□□□□□ -2.01
Rfx1P48377 Gm24523-201ENSMUST00000083965 132 ntBASIC2.52□□□□□ -2.01
Rfx1P48377 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Rfx1P48377 Gm42664-201ENSMUST00000199417 3239 ntBASIC2.51□□□□□ -2.01
Rfx1P48377 Gm26345-201ENSMUST00000157534 120 ntBASIC2.51□□□□□ -2.01
Rfx1P48377 Gm24075-201ENSMUST00000158175 72 ntBASIC2.51□□□□□ -2.01
Rfx1P48377 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC2.51□□□□□ -2.01
Rfx1P48377 AC158598.2-201ENSMUST00000213397 3832 ntBASIC2.51□□□□□ -2.01
Rfx1P48377 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.51□□□□□ -2.01
Rfx1P48377 BC022960-201ENSMUST00000119987 1815 ntBASIC2.51□□□□□ -2.01
Rfx1P48377 Gm22558-201ENSMUST00000157326 95 ntBASIC2.5□□□□□ -2.01
Rfx1P48377 Gm22332-201ENSMUST00000158072 126 ntBASIC2.5□□□□□ -2.01
Rfx1P48377 Gm26379-202ENSMUST00000200225 132 ntBASIC2.5□□□□□ -2.01
Rfx1P48377 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Rfx1P48377 Gm43753-201ENSMUST00000196539 3309 ntBASIC2.49□□□□□ -2.01
Rfx1P48377 Gm22451-201ENSMUST00000122803 151 ntBASIC2.49□□□□□ -2.01
Rfx1P48377 Gm25460-201ENSMUST00000157954 127 ntBASIC2.49□□□□□ -2.01
Rfx1P48377 Gm20409-201ENSMUST00000173457 130 ntBASIC2.49□□□□□ -2.01
Rfx1P48377 Gm20391-201ENSMUST00000174722 106 ntBASIC2.49□□□□□ -2.01
Rfx1P48377 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Rfx1P48377 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Rfx1P48377 Gm24842-201ENSMUST00000158681 54 ntBASIC2.48□□□□□ -2.01
Rfx1P48377 CT009696.1-201ENSMUST00000215745 256 ntBASIC2.48□□□□□ -2.01
Rfx1P48377 Gm25815-201ENSMUST00000082755 107 ntBASIC2.48□□□□□ -2.01
Rfx1P48377 Gm22509-201ENSMUST00000082775 107 ntBASIC2.48□□□□□ -2.01
Rfx1P48377 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.47□□□□□ -2.01
Rfx1P48377 Mir3094-201ENSMUST00000175121 64 ntBASIC2.47□□□□□ -2.01
Rfx1P48377 Gm25949-201ENSMUST00000175333 114 ntBASIC2.47□□□□□ -2.01
Rfx1P48377 Gm45471-201ENSMUST00000211270 281 ntBASIC2.47□□□□□ -2.01
Rfx1P48377 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Rfx1P48377 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC2.47□□□□□ -2.01
Rfx1P48377 Gm10730-201ENSMUST00000194097 2723 ntBASIC2.46□□□□□ -2.02
Rfx1P48377 Gm22003-201ENSMUST00000101885 107 ntBASIC2.46□□□□□ -2.02
Rfx1P48377 Gm25753-201ENSMUST00000116792 121 ntBASIC2.46□□□□□ -2.02
Rfx1P48377 Gm24894-201ENSMUST00000122744 118 ntBASIC2.46□□□□□ -2.02
Rfx1P48377 Gm21885-201ENSMUST00000178891 327 ntBASIC2.46□□□□□ -2.02
Rfx1P48377 Gm22756-201ENSMUST00000180118 107 ntBASIC2.46□□□□□ -2.02
Rfx1P48377 Mir7009-201ENSMUST00000184519 64 ntBASIC2.46□□□□□ -2.02
Rfx1P48377 Gm27369-201ENSMUST00000185182 71 ntBASIC2.46□□□□□ -2.02
Rfx1P48377 Gm26054-201ENSMUST00000083037 107 ntBASIC2.46□□□□□ -2.02
Rfx1P48377 Gm24492-201ENSMUST00000083798 107 ntBASIC2.46□□□□□ -2.02
Rfx1P48377 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Rfx1P48377 Gm25089-201ENSMUST00000102015 79 ntBASIC2.45□□□□□ -2.02
Rfx1P48377 Mir547-201ENSMUST00000102051 78 ntBASIC2.45□□□□□ -2.02
Rfx1P48377 Gm25091-201ENSMUST00000103997 71 ntBASIC2.45□□□□□ -2.02
Rfx1P48377 Mir654-201ENSMUST00000104787 84 ntBASIC2.45□□□□□ -2.02
Rfx1P48377 Gm23889-201ENSMUST00000122689 104 ntBASIC2.45□□□□□ -2.02
Rfx1P48377 Mir5104-201ENSMUST00000175319 94 ntBASIC2.45□□□□□ -2.02
Rfx1P48377 Gm25840-201ENSMUST00000177821 79 ntBASIC2.45□□□□□ -2.02
Rfx1P48377 Gm24952-201ENSMUST00000177909 79 ntBASIC2.45□□□□□ -2.02
Rfx1P48377 Gm23682-201ENSMUST00000178146 79 ntBASIC2.45□□□□□ -2.02
Rfx1P48377 Gm24652-201ENSMUST00000178223 79 ntBASIC2.45□□□□□ -2.02
Rfx1P48377 Gm22629-201ENSMUST00000178272 79 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 139.7 ms