Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
RaraP11416 Gm22486-201ENSMUST00000116815 137 ntBASIC2.72□□□□□ -1.97
RaraP11416 Gm23980-201ENSMUST00000157135 158 ntBASIC2.72□□□□□ -1.97
RaraP11416 Gm23223-201ENSMUST00000158119 127 ntBASIC2.72□□□□□ -1.97
RaraP11416 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC2.72□□□□□ -1.97
RaraP11416 Gm20409-201ENSMUST00000173457 130 ntBASIC2.72□□□□□ -1.97
RaraP11416 Gm25476-201ENSMUST00000175125 185 ntBASIC2.72□□□□□ -1.97
RaraP11416 Snord50a-201ENSMUST00000178154 72 ntBASIC2.72□□□□□ -1.97
RaraP11416 Gm24463-201ENSMUST00000178417 72 ntBASIC2.72□□□□□ -1.97
RaraP11416 Gm26073-201ENSMUST00000179906 127 ntBASIC2.72□□□□□ -1.97
RaraP11416 Gm29535-201ENSMUST00000185723 109 ntBASIC2.72□□□□□ -1.97
RaraP11416 Gm28143-201ENSMUST00000191082 109 ntBASIC2.72□□□□□ -1.97
RaraP11416 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
RaraP11416 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
RaraP11416 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.71□□□□□ -1.97
RaraP11416 Gm3081-201ENSMUST00000193413 3025 ntBASIC2.71□□□□□ -1.98
RaraP11416 n-R5s26-201ENSMUST00000104601 122 ntBASIC2.71□□□□□ -1.98
RaraP11416 Gm12309-201ENSMUST00000119889 182 ntBASIC2.71□□□□□ -1.98
RaraP11416 Gm26406-201ENSMUST00000158503 124 ntBASIC2.71□□□□□ -1.98
RaraP11416 Gm44526-201ENSMUST00000204664 121 ntBASIC2.71□□□□□ -1.98
RaraP11416 Snora41-201ENSMUST00000082668 132 ntBASIC2.71□□□□□ -1.98
RaraP11416 Gm24261-201ENSMUST00000083744 104 ntBASIC2.71□□□□□ -1.98
RaraP11416 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
RaraP11416 Gm24670-201ENSMUST00000104154 132 ntBASIC2.7□□□□□ -1.98
RaraP11416 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC2.7□□□□□ -1.98
RaraP11416 Gm23083-201ENSMUST00000157851 116 ntBASIC2.7□□□□□ -1.98
RaraP11416 Gm24000-201ENSMUST00000158063 89 ntBASIC2.7□□□□□ -1.98
RaraP11416 Gm24947-201ENSMUST00000158334 110 ntBASIC2.7□□□□□ -1.98
RaraP11416 Gm22768-201ENSMUST00000158366 153 ntBASIC2.7□□□□□ -1.98
RaraP11416 Mir7068-201ENSMUST00000183439 74 ntBASIC2.7□□□□□ -1.98
RaraP11416 Gm27532-201ENSMUST00000183726 113 ntBASIC2.7□□□□□ -1.98
RaraP11416 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.7□□□□□ -1.98
RaraP11416 n-R5s176-201ENSMUST00000082683 109 ntBASIC2.7□□□□□ -1.98
RaraP11416 Gm24099-201ENSMUST00000083384 107 ntBASIC2.7□□□□□ -1.98
RaraP11416 Gm25090-201ENSMUST00000104000 132 ntBASIC2.69□□□□□ -1.98
RaraP11416 Mir466k-201ENSMUST00000116774 122 ntBASIC2.69□□□□□ -1.98
RaraP11416 Gm22679-201ENSMUST00000116975 100 ntBASIC2.69□□□□□ -1.98
RaraP11416 Gm22729-201ENSMUST00000158088 129 ntBASIC2.69□□□□□ -1.98
RaraP11416 Gm22943-201ENSMUST00000158564 76 ntBASIC2.69□□□□□ -1.98
RaraP11416 Gm24668-201ENSMUST00000158935 104 ntBASIC2.69□□□□□ -1.98
RaraP11416 Gm8031-201ENSMUST00000213430 626 ntBASIC2.69□□□□□ -1.98
RaraP11416 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC2.69□□□□□ -1.98
RaraP11416 Mir490-201ENSMUST00000093567 84 ntBASIC2.69□□□□□ -1.98
RaraP11416 AC122828.3-201ENSMUST00000223019 3915 ntBASIC2.69□□□□□ -1.98
RaraP11416 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
RaraP11416 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
RaraP11416 Gm13136-201ENSMUST00000121031 2950 ntBASIC2.68□□□□□ -1.98
RaraP11416 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC2.68□□□□□ -1.98
RaraP11416 Gm43473-201ENSMUST00000200442 5997 ntBASIC2.68□□□□□ -1.98
RaraP11416 Gm24691-201ENSMUST00000157762 140 ntBASIC2.68□□□□□ -1.98
RaraP11416 Gm24958-201ENSMUST00000158009 97 ntBASIC2.68□□□□□ -1.98
RaraP11416 Gm23181-201ENSMUST00000158685 110 ntBASIC2.68□□□□□ -1.98
RaraP11416 Gm26466-201ENSMUST00000179615 79 ntBASIC2.68□□□□□ -1.98
RaraP11416 Gm3852-201ENSMUST00000182781 264 ntBASIC2.68□□□□□ -1.98
RaraP11416 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
RaraP11416 Gm23370-201ENSMUST00000199545 130 ntBASIC2.68□□□□□ -1.98
RaraP11416 Mir411-201ENSMUST00000083543 82 ntBASIC2.68□□□□□ -1.98
RaraP11416 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.67□□□□□ -1.98
RaraP11416 Gm7209-201ENSMUST00000122339 333 ntBASIC2.67□□□□□ -1.98
RaraP11416 Gm25855-201ENSMUST00000082787 72 ntBASIC2.67□□□□□ -1.98
RaraP11416 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC2.67□□□□□ -1.98
RaraP11416 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
RaraP11416 Mir344c-201ENSMUST00000103919 92 ntBASIC2.66□□□□□ -1.98
RaraP11416 Gm25887-201ENSMUST00000157777 84 ntBASIC2.66□□□□□ -1.98
RaraP11416 Gm24212-201ENSMUST00000158258 132 ntBASIC2.66□□□□□ -1.98
RaraP11416 Mir3965-201ENSMUST00000175570 69 ntBASIC2.66□□□□□ -1.98
RaraP11416 Gm45522-201ENSMUST00000210784 166 ntBASIC2.66□□□□□ -1.98
RaraP11416 n-R5s40-201ENSMUST00000082475 124 ntBASIC2.66□□□□□ -1.98
RaraP11416 Gm22743-201ENSMUST00000083445 133 ntBASIC2.66□□□□□ -1.98
RaraP11416 Gm22827-201ENSMUST00000083766 107 ntBASIC2.66□□□□□ -1.98
RaraP11416 Gm25681-201ENSMUST00000083938 106 ntBASIC2.66□□□□□ -1.98
RaraP11416 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
RaraP11416 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC2.65□□□□□ -1.98
RaraP11416 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.98
RaraP11416 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.98
RaraP11416 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
RaraP11416 Gm22319-201ENSMUST00000157147 122 ntBASIC2.65□□□□□ -1.99
RaraP11416 Gm24210-201ENSMUST00000158263 133 ntBASIC2.65□□□□□ -1.99
RaraP11416 Gm27505-201ENSMUST00000185071 110 ntBASIC2.65□□□□□ -1.99
RaraP11416 Gm45268-201ENSMUST00000210046 370 ntBASIC2.65□□□□□ -1.99
RaraP11416 AC164612.2-202ENSMUST00000216314 253 ntBASIC2.65□□□□□ -1.99
RaraP11416 Gm42770-201ENSMUST00000199657 4155 ntBASIC2.64□□□□□ -1.99
RaraP11416 Gm37664-201ENSMUST00000194607 3813 ntBASIC2.64□□□□□ -1.99
RaraP11416 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
RaraP11416 n-R5s188-201ENSMUST00000122646 105 ntBASIC2.64□□□□□ -1.99
RaraP11416 Gm24238-201ENSMUST00000157792 98 ntBASIC2.64□□□□□ -1.99
RaraP11416 Gm26004-201ENSMUST00000158804 116 ntBASIC2.64□□□□□ -1.99
RaraP11416 Gm25820-202ENSMUST00000197479 128 ntBASIC2.64□□□□□ -1.99
RaraP11416 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC2.64□□□□□ -1.99
RaraP11416 Mir429-201ENSMUST00000083493 83 ntBASIC2.64□□□□□ -1.99
RaraP11416 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC2.64□□□□□ -1.99
RaraP11416 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
RaraP11416 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
RaraP11416 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
RaraP11416 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC2.63□□□□□ -1.99
RaraP11416 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
RaraP11416 n-R5s200-201ENSMUST00000104194 113 ntBASIC2.63□□□□□ -1.99
RaraP11416 Gm22888-201ENSMUST00000158640 77 ntBASIC2.63□□□□□ -1.99
RaraP11416 Gm23548-201ENSMUST00000158963 106 ntBASIC2.63□□□□□ -1.99
RaraP11416 Gm24333-201ENSMUST00000175101 84 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 197.1 ms