Protein–RNA interactions for Protein: O88834

Shd, SH2 domain-containing adapter protein D, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShdO88834 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.49□□□□□ -2.17
ShdO88834 Gm24902-201ENSMUST00000158126 123 ntBASIC1.49□□□□□ -2.17
ShdO88834 Gm28862-201ENSMUST00000188246 163 ntBASIC1.49□□□□□ -2.17
ShdO88834 Gm26225-201ENSMUST00000082508 135 ntBASIC1.49□□□□□ -2.17
ShdO88834 Gm23299-201ENSMUST00000082708 79 ntBASIC1.49□□□□□ -2.17
ShdO88834 Gm22557-201ENSMUST00000157804 102 ntBASIC1.48□□□□□ -2.17
ShdO88834 Gm25838-201ENSMUST00000158920 120 ntBASIC1.48□□□□□ -2.17
ShdO88834 Gm37116-201ENSMUST00000195161 147 ntBASIC1.48□□□□□ -2.17
ShdO88834 AC154328.1-201ENSMUST00000225875 307 ntBASIC1.48□□□□□ -2.17
ShdO88834 AC168062.3-201ENSMUST00000227025 165 ntBASIC1.48□□□□□ -2.17
ShdO88834 Mir654-201ENSMUST00000104787 84 ntBASIC1.47□□□□□ -2.17
ShdO88834 Gm23106-201ENSMUST00000157554 101 ntBASIC1.47□□□□□ -2.17
ShdO88834 Gm25364-201ENSMUST00000158851 107 ntBASIC1.47□□□□□ -2.17
ShdO88834 Gm20391-201ENSMUST00000174722 106 ntBASIC1.47□□□□□ -2.17
ShdO88834 Gm25958-201ENSMUST00000175114 71 ntBASIC1.47□□□□□ -2.17
ShdO88834 Gm16404-201ENSMUST00000177739 468 ntBASIC1.47□□□□□ -2.17
ShdO88834 Gm14598-201ENSMUST00000180109 468 ntBASIC1.47□□□□□ -2.17
ShdO88834 Gm14625-201ENSMUST00000180231 468 ntBASIC1.47□□□□□ -2.17
ShdO88834 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.47□□□□□ -2.17
ShdO88834 Gm16976-205ENSMUST00000227324 226 ntBASIC1.47□□□□□ -2.17
ShdO88834 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC1.47□□□□□ -2.17
ShdO88834 Gm11792-201ENSMUST00000120640 168 ntBASIC1.46□□□□□ -2.18
ShdO88834 Gm22603-201ENSMUST00000157603 96 ntBASIC1.46□□□□□ -2.18
ShdO88834 Gm26360-201ENSMUST00000158872 103 ntBASIC1.46□□□□□ -2.18
ShdO88834 Gm44962-201ENSMUST00000206460 279 ntBASIC1.46□□□□□ -2.18
ShdO88834 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
ShdO88834 Snord47-201ENSMUST00000083034 77 ntBASIC1.46□□□□□ -2.18
ShdO88834 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.45□□□□□ -2.18
ShdO88834 Gm26074-201ENSMUST00000104063 129 ntBASIC1.45□□□□□ -2.18
ShdO88834 Gm22148-201ENSMUST00000104445 107 ntBASIC1.45□□□□□ -2.18
ShdO88834 Gm24588-201ENSMUST00000116696 83 ntBASIC1.45□□□□□ -2.18
ShdO88834 Gm25663-201ENSMUST00000157698 135 ntBASIC1.45□□□□□ -2.18
ShdO88834 Gm23221-201ENSMUST00000158118 93 ntBASIC1.45□□□□□ -2.18
ShdO88834 AC192091.2-201ENSMUST00000217869 117 ntBASIC1.45□□□□□ -2.18
ShdO88834 AC153646.2-201ENSMUST00000220516 109 ntBASIC1.45□□□□□ -2.18
ShdO88834 Gm25636-201ENSMUST00000082666 133 ntBASIC1.45□□□□□ -2.18
ShdO88834 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC1.45□□□□□ -2.18
ShdO88834 Gm13345-201ENSMUST00000121928 228 ntBASIC1.44□□□□□ -2.18
ShdO88834 Gm23122-201ENSMUST00000157645 103 ntBASIC1.44□□□□□ -2.18
ShdO88834 Gm22200-201ENSMUST00000158614 67 ntBASIC1.44□□□□□ -2.18
ShdO88834 AC101945.1-201ENSMUST00000226734 466 ntBASIC1.44□□□□□ -2.18
ShdO88834 n-R5s63-201ENSMUST00000122756 103 ntBASIC1.43□□□□□ -2.18
ShdO88834 Gm26090-201ENSMUST00000157897 128 ntBASIC1.43□□□□□ -2.18
ShdO88834 Gm22963-201ENSMUST00000157960 91 ntBASIC1.43□□□□□ -2.18
ShdO88834 Traj60-201ENSMUST00000167781 54 ntBASIC1.43□□□□□ -2.18
ShdO88834 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.43□□□□□ -2.18
ShdO88834 Snora20-201ENSMUST00000082703 128 ntBASIC1.43□□□□□ -2.18
ShdO88834 Gm22738-201ENSMUST00000083440 147 ntBASIC1.43□□□□□ -2.18
ShdO88834 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC1.42□□□□□ -2.18
ShdO88834 Mir451a-201ENSMUST00000093557 72 ntBASIC1.42□□□□□ -2.18
ShdO88834 Gm22551-201ENSMUST00000157795 103 ntBASIC1.41□□□□□ -2.18
ShdO88834 Gm24880-201ENSMUST00000158776 85 ntBASIC1.41□□□□□ -2.18
ShdO88834 Gm22973-201ENSMUST00000083298 191 ntBASIC1.41□□□□□ -2.18
ShdO88834 Gm25650-201ENSMUST00000083784 162 ntBASIC1.41□□□□□ -2.18
ShdO88834 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
ShdO88834 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.4□□□□□ -2.19
ShdO88834 Snord13-201ENSMUST00000157627 104 ntBASIC1.4□□□□□ -2.19
ShdO88834 Gm25771-201ENSMUST00000158565 144 ntBASIC1.4□□□□□ -2.19
ShdO88834 Snora24-201ENSMUST00000174989 130 ntBASIC1.4□□□□□ -2.19
ShdO88834 Gm22914-201ENSMUST00000175195 77 ntBASIC1.4□□□□□ -2.19
ShdO88834 Mir344d-3-201ENSMUST00000175458 80 ntBASIC1.4□□□□□ -2.19
ShdO88834 Gm22802-201ENSMUST00000175621 89 ntBASIC1.4□□□□□ -2.19
ShdO88834 Gm16399-201ENSMUST00000181423 219 ntBASIC1.4□□□□□ -2.19
ShdO88834 Gm27265-201ENSMUST00000183559 77 ntBASIC1.4□□□□□ -2.19
ShdO88834 Gm28794-201ENSMUST00000185276 136 ntBASIC1.4□□□□□ -2.19
ShdO88834 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
ShdO88834 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.39□□□□□ -2.19
ShdO88834 Gm23907-201ENSMUST00000104595 189 ntBASIC1.39□□□□□ -2.19
ShdO88834 Gm23336-201ENSMUST00000117023 123 ntBASIC1.39□□□□□ -2.19
ShdO88834 Gm14568-201ENSMUST00000119321 294 ntBASIC1.39□□□□□ -2.19
ShdO88834 Gm22999-201ENSMUST00000157082 88 ntBASIC1.39□□□□□ -2.19
ShdO88834 Gm26049-201ENSMUST00000157313 108 ntBASIC1.39□□□□□ -2.19
ShdO88834 Gm24750-201ENSMUST00000157843 104 ntBASIC1.39□□□□□ -2.19
ShdO88834 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC1.39□□□□□ -2.19
ShdO88834 Gm5002-201ENSMUST00000207145 223 ntBASIC1.39□□□□□ -2.19
ShdO88834 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.39□□□□□ -2.19
ShdO88834 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC1.39□□□□□ -2.19
ShdO88834 Gm16539-201ENSMUST00000160086 327 ntBASIC1.38□□□□□ -2.19
ShdO88834 Gm23567-201ENSMUST00000178005 107 ntBASIC1.38□□□□□ -2.19
ShdO88834 Gm27420-201ENSMUST00000183823 79 ntBASIC1.38□□□□□ -2.19
ShdO88834 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC1.38□□□□□ -2.19
ShdO88834 Gm25401-201ENSMUST00000082975 106 ntBASIC1.38□□□□□ -2.19
ShdO88834 Gm22169-201ENSMUST00000083229 107 ntBASIC1.38□□□□□ -2.19
ShdO88834 Gm21940-201ENSMUST00000204940 2278 ntBASIC1.38□□□□□ -2.19
ShdO88834 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
ShdO88834 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
ShdO88834 Gm44922-201ENSMUST00000206690 90 ntBASIC1.37□□□□□ -2.19
ShdO88834 Gm45471-201ENSMUST00000211270 281 ntBASIC1.37□□□□□ -2.19
ShdO88834 Mir489-201ENSMUST00000093599 107 ntBASIC1.37□□□□□ -2.19
ShdO88834 Gm25495-201ENSMUST00000104431 131 ntBASIC1.36□□□□□ -2.19
ShdO88834 Gm23080-201ENSMUST00000157846 103 ntBASIC1.36□□□□□ -2.19
ShdO88834 Gm22612-201ENSMUST00000158293 101 ntBASIC1.36□□□□□ -2.19
ShdO88834 Gm25769-201ENSMUST00000158569 127 ntBASIC1.36□□□□□ -2.19
ShdO88834 Gm25241-201ENSMUST00000174909 84 ntBASIC1.36□□□□□ -2.19
ShdO88834 Gm26217-201ENSMUST00000175212 84 ntBASIC1.36□□□□□ -2.19
ShdO88834 Gm25128-201ENSMUST00000083339 76 ntBASIC1.36□□□□□ -2.19
ShdO88834 Gm8935-202ENSMUST00000105727 1959 ntBASIC1.36□□□□□ -2.19
ShdO88834 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
ShdO88834 Gm23772-201ENSMUST00000104433 102 ntBASIC1.35□□□□□ -2.19
ShdO88834 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 162.8 ms