Protein–RNA interactions for Protein: O55187

Cbx4, E3 SUMO-protein ligase CBX4, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx4O55187 Mir3087-201ENSMUST00000199405 56 ntBASIC1.5□□□□□ -2.17
Cbx4O55187 CT033781.2-201ENSMUST00000221113 153 ntBASIC1.5□□□□□ -2.17
Cbx4O55187 AC126939.3-201ENSMUST00000226061 166 ntBASIC1.5□□□□□ -2.17
Cbx4O55187 AC168062.3-201ENSMUST00000227025 165 ntBASIC1.5□□□□□ -2.17
Cbx4O55187 Gm22884-201ENSMUST00000083127 140 ntBASIC1.5□□□□□ -2.17
Cbx4O55187 Gm22738-201ENSMUST00000083440 147 ntBASIC1.5□□□□□ -2.17
Cbx4O55187 Gm23772-201ENSMUST00000104433 102 ntBASIC1.49□□□□□ -2.17
Cbx4O55187 Gm15115-201ENSMUST00000121145 264 ntBASIC1.49□□□□□ -2.17
Cbx4O55187 Gm25423-201ENSMUST00000157609 107 ntBASIC1.49□□□□□ -2.17
Cbx4O55187 Gm26412-201ENSMUST00000157666 55 ntBASIC1.49□□□□□ -2.17
Cbx4O55187 Gm26213-201ENSMUST00000158582 110 ntBASIC1.49□□□□□ -2.17
Cbx4O55187 Gm24222-201ENSMUST00000158834 93 ntBASIC1.49□□□□□ -2.17
Cbx4O55187 Gm25831-201ENSMUST00000158924 163 ntBASIC1.49□□□□□ -2.17
Cbx4O55187 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Cbx4O55187 Mir7241-201ENSMUST00000184532 64 ntBASIC1.49□□□□□ -2.17
Cbx4O55187 Gm42988-201ENSMUST00000198116 225 ntBASIC1.49□□□□□ -2.17
Cbx4O55187 AC150901.1-201ENSMUST00000208407 145 ntBASIC1.49□□□□□ -2.17
Cbx4O55187 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC1.49□□□□□ -2.17
Cbx4O55187 CT030645.1-201ENSMUST00000224020 231 ntBASIC1.49□□□□□ -2.17
Cbx4O55187 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.49□□□□□ -2.17
Cbx4O55187 Mir320-201ENSMUST00000083594 82 ntBASIC1.49□□□□□ -2.17
Cbx4O55187 Gm26080-201ENSMUST00000104069 131 ntBASIC1.48□□□□□ -2.17
Cbx4O55187 Gm22387-201ENSMUST00000158191 131 ntBASIC1.48□□□□□ -2.17
Cbx4O55187 Gm24054-201ENSMUST00000158619 105 ntBASIC1.48□□□□□ -2.17
Cbx4O55187 Gm22699-201ENSMUST00000175376 105 ntBASIC1.48□□□□□ -2.17
Cbx4O55187 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC1.48□□□□□ -2.17
Cbx4O55187 Mir7675-201ENSMUST00000184262 58 ntBASIC1.48□□□□□ -2.17
Cbx4O55187 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC1.48□□□□□ -2.17
Cbx4O55187 Gm25081-201ENSMUST00000082534 108 ntBASIC1.48□□□□□ -2.17
Cbx4O55187 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
Cbx4O55187 Gm22790-201ENSMUST00000157229 129 ntBASIC1.47□□□□□ -2.17
Cbx4O55187 Gm17020-201ENSMUST00000172274 274 ntBASIC1.47□□□□□ -2.17
Cbx4O55187 Mir3061-201ENSMUST00000175129 91 ntBASIC1.47□□□□□ -2.17
Cbx4O55187 Mir5104-201ENSMUST00000175319 94 ntBASIC1.47□□□□□ -2.17
Cbx4O55187 Gm44962-201ENSMUST00000206460 279 ntBASIC1.47□□□□□ -2.17
Cbx4O55187 AC153646.2-201ENSMUST00000220516 109 ntBASIC1.47□□□□□ -2.17
Cbx4O55187 Mir201-201ENSMUST00000083470 66 ntBASIC1.47□□□□□ -2.17
Cbx4O55187 Gm26018-201ENSMUST00000104406 128 ntBASIC1.46□□□□□ -2.18
Cbx4O55187 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.46□□□□□ -2.18
Cbx4O55187 Gm22082-201ENSMUST00000157587 161 ntBASIC1.46□□□□□ -2.18
Cbx4O55187 Gm22842-201ENSMUST00000157709 118 ntBASIC1.46□□□□□ -2.18
Cbx4O55187 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
Cbx4O55187 Ighv15-1-201ENSMUST00000194450 276 ntBASIC1.46□□□□□ -2.18
Cbx4O55187 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC1.46□□□□□ -2.18
Cbx4O55187 Gm18795-202ENSMUST00000223373 2920 ntBASIC1.45□□□□□ -2.18
Cbx4O55187 Gm23170-201ENSMUST00000157158 106 ntBASIC1.45□□□□□ -2.18
Cbx4O55187 Gm24076-201ENSMUST00000158179 94 ntBASIC1.45□□□□□ -2.18
Cbx4O55187 Gm22139-201ENSMUST00000158747 105 ntBASIC1.45□□□□□ -2.18
Cbx4O55187 Gm23337-201ENSMUST00000158959 118 ntBASIC1.45□□□□□ -2.18
Cbx4O55187 Gm20391-201ENSMUST00000174722 106 ntBASIC1.45□□□□□ -2.18
Cbx4O55187 Gm23567-201ENSMUST00000178005 107 ntBASIC1.45□□□□□ -2.18
Cbx4O55187 Gm27265-201ENSMUST00000183559 77 ntBASIC1.45□□□□□ -2.18
Cbx4O55187 Mir7039-201ENSMUST00000183852 85 ntBASIC1.45□□□□□ -2.18
Cbx4O55187 Trav5-2-201ENSMUST00000199855 280 ntBASIC1.45□□□□□ -2.18
Cbx4O55187 Gm25588-201ENSMUST00000082501 140 ntBASIC1.45□□□□□ -2.18
Cbx4O55187 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
Cbx4O55187 Gm14882-201ENSMUST00000117216 218 ntBASIC1.44□□□□□ -2.18
Cbx4O55187 Gm24262-201ENSMUST00000157431 144 ntBASIC1.44□□□□□ -2.18
Cbx4O55187 Gm23558-201ENSMUST00000157823 80 ntBASIC1.44□□□□□ -2.18
Cbx4O55187 Gm23277-201ENSMUST00000157914 136 ntBASIC1.44□□□□□ -2.18
Cbx4O55187 Gm24902-201ENSMUST00000158126 123 ntBASIC1.44□□□□□ -2.18
Cbx4O55187 Gm22946-201ENSMUST00000158558 82 ntBASIC1.44□□□□□ -2.18
Cbx4O55187 Gm27934-201ENSMUST00000158795 63 ntBASIC1.44□□□□□ -2.18
Cbx4O55187 Gm24229-201ENSMUST00000158830 118 ntBASIC1.44□□□□□ -2.18
Cbx4O55187 Gm22403-201ENSMUST00000174919 84 ntBASIC1.44□□□□□ -2.18
Cbx4O55187 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
Cbx4O55187 Gm44976-201ENSMUST00000205543 261 ntBASIC1.44□□□□□ -2.18
Cbx4O55187 Gm25038-201ENSMUST00000082928 130 ntBASIC1.44□□□□□ -2.18
Cbx4O55187 Mir489-201ENSMUST00000093599 107 ntBASIC1.44□□□□□ -2.18
Cbx4O55187 Mir544-201ENSMUST00000103813 78 ntBASIC1.43□□□□□ -2.18
Cbx4O55187 Gm26049-201ENSMUST00000157313 108 ntBASIC1.43□□□□□ -2.18
Cbx4O55187 Gm22963-201ENSMUST00000157960 91 ntBASIC1.43□□□□□ -2.18
Cbx4O55187 Gm24001-201ENSMUST00000158463 85 ntBASIC1.43□□□□□ -2.18
Cbx4O55187 Gm25771-201ENSMUST00000158565 144 ntBASIC1.43□□□□□ -2.18
Cbx4O55187 Gm22286-201ENSMUST00000179708 107 ntBASIC1.43□□□□□ -2.18
Cbx4O55187 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC1.43□□□□□ -2.18
Cbx4O55187 AC168880.2-201ENSMUST00000224488 201 ntBASIC1.43□□□□□ -2.18
Cbx4O55187 Snord14a-201ENSMUST00000082807 87 ntBASIC1.43□□□□□ -2.18
Cbx4O55187 Gm23377-201ENSMUST00000082943 126 ntBASIC1.43□□□□□ -2.18
Cbx4O55187 Gm25136-201ENSMUST00000083253 115 ntBASIC1.43□□□□□ -2.18
Cbx4O55187 Gm24523-201ENSMUST00000083965 132 ntBASIC1.43□□□□□ -2.18
Cbx4O55187 Gm11792-201ENSMUST00000120640 168 ntBASIC1.42□□□□□ -2.18
Cbx4O55187 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.42□□□□□ -2.18
Cbx4O55187 Gm18502-201ENSMUST00000218679 199 ntBASIC1.42□□□□□ -2.18
Cbx4O55187 AC101945.1-201ENSMUST00000226734 466 ntBASIC1.42□□□□□ -2.18
Cbx4O55187 AC165138.1-201ENSMUST00000226984 270 ntBASIC1.42□□□□□ -2.18
Cbx4O55187 Snora20-201ENSMUST00000082703 128 ntBASIC1.42□□□□□ -2.18
Cbx4O55187 Mir451a-201ENSMUST00000093557 72 ntBASIC1.42□□□□□ -2.18
Cbx4O55187 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.41□□□□□ -2.18
Cbx4O55187 Gm24232-201ENSMUST00000104314 132 ntBASIC1.41□□□□□ -2.18
Cbx4O55187 Gm22373-201ENSMUST00000104584 89 ntBASIC1.41□□□□□ -2.18
Cbx4O55187 Gm25980-201ENSMUST00000157176 218 ntBASIC1.41□□□□□ -2.18
Cbx4O55187 Gm23221-201ENSMUST00000158118 93 ntBASIC1.41□□□□□ -2.18
Cbx4O55187 Gm26326-201ENSMUST00000083070 129 ntBASIC1.41□□□□□ -2.18
Cbx4O55187 Snord61-201ENSMUST00000083176 71 ntBASIC1.41□□□□□ -2.18
Cbx4O55187 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.41□□□□□ -2.18
Cbx4O55187 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.41□□□□□ -2.18
Cbx4O55187 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
Cbx4O55187 Gm23320-201ENSMUST00000104462 127 ntBASIC1.4□□□□□ -2.19
Cbx4O55187 Gm25541-201ENSMUST00000116888 126 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 141.5 ms