Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 AC151902.2-201ENSMUST00000226419 301 ntBASIC1.51□□□□□ -2.17
Pcdh9F8VPK8 AC165138.1-201ENSMUST00000226984 270 ntBASIC1.51□□□□□ -2.17
Pcdh9F8VPK8 Gm22283-201ENSMUST00000082556 161 ntBASIC1.51□□□□□ -2.17
Pcdh9F8VPK8 Gm22743-201ENSMUST00000083445 133 ntBASIC1.51□□□□□ -2.17
Pcdh9F8VPK8 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
Pcdh9F8VPK8 Gm23320-201ENSMUST00000104462 127 ntBASIC1.5□□□□□ -2.17
Pcdh9F8VPK8 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC1.5□□□□□ -2.17
Pcdh9F8VPK8 Gm23080-201ENSMUST00000157846 103 ntBASIC1.5□□□□□ -2.17
Pcdh9F8VPK8 Gm24000-201ENSMUST00000158063 89 ntBASIC1.5□□□□□ -2.17
Pcdh9F8VPK8 Gm23760-201ENSMUST00000158350 116 ntBASIC1.5□□□□□ -2.17
Pcdh9F8VPK8 Gm24001-201ENSMUST00000158463 85 ntBASIC1.5□□□□□ -2.17
Pcdh9F8VPK8 Gm25771-201ENSMUST00000158565 144 ntBASIC1.5□□□□□ -2.17
Pcdh9F8VPK8 Gm23567-201ENSMUST00000178005 107 ntBASIC1.5□□□□□ -2.17
Pcdh9F8VPK8 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
Pcdh9F8VPK8 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.5□□□□□ -2.17
Pcdh9F8VPK8 Snord14a-201ENSMUST00000082807 87 ntBASIC1.5□□□□□ -2.17
Pcdh9F8VPK8 Gm25136-201ENSMUST00000083253 115 ntBASIC1.5□□□□□ -2.17
Pcdh9F8VPK8 Mir223-201ENSMUST00000102112 110 ntBASIC1.49□□□□□ -2.17
Pcdh9F8VPK8 Gm22373-201ENSMUST00000104584 89 ntBASIC1.49□□□□□ -2.17
Pcdh9F8VPK8 Gm24054-201ENSMUST00000158619 105 ntBASIC1.49□□□□□ -2.17
Pcdh9F8VPK8 Gm22888-201ENSMUST00000158640 77 ntBASIC1.49□□□□□ -2.17
Pcdh9F8VPK8 Gm24345-201ENSMUST00000158706 124 ntBASIC1.49□□□□□ -2.17
Pcdh9F8VPK8 Mir7225-201ENSMUST00000184178 54 ntBASIC1.49□□□□□ -2.17
Pcdh9F8VPK8 Gm27517-201ENSMUST00000184347 236 ntBASIC1.49□□□□□ -2.17
Pcdh9F8VPK8 Gm29613-201ENSMUST00000185846 313 ntBASIC1.49□□□□□ -2.17
Pcdh9F8VPK8 Gm29544-201ENSMUST00000188860 313 ntBASIC1.49□□□□□ -2.17
Pcdh9F8VPK8 Gm28808-201ENSMUST00000190978 313 ntBASIC1.49□□□□□ -2.17
Pcdh9F8VPK8 Gm45471-201ENSMUST00000211270 281 ntBASIC1.49□□□□□ -2.17
Pcdh9F8VPK8 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.49□□□□□ -2.17
Pcdh9F8VPK8 Gm23670-201ENSMUST00000157469 119 ntBASIC1.48□□□□□ -2.17
Pcdh9F8VPK8 Gm25423-201ENSMUST00000157609 107 ntBASIC1.48□□□□□ -2.17
Pcdh9F8VPK8 Gm26415-201ENSMUST00000157673 292 ntBASIC1.48□□□□□ -2.17
Pcdh9F8VPK8 Gm23558-201ENSMUST00000157823 80 ntBASIC1.48□□□□□ -2.17
Pcdh9F8VPK8 Gm22967-201ENSMUST00000157956 239 ntBASIC1.48□□□□□ -2.17
Pcdh9F8VPK8 Gm17020-201ENSMUST00000172274 274 ntBASIC1.48□□□□□ -2.17
Pcdh9F8VPK8 Gm22884-201ENSMUST00000083127 140 ntBASIC1.48□□□□□ -2.17
Pcdh9F8VPK8 Mir880-201ENSMUST00000104809 78 ntBASIC1.47□□□□□ -2.17
Pcdh9F8VPK8 Gm22105-201ENSMUST00000116734 116 ntBASIC1.47□□□□□ -2.17
Pcdh9F8VPK8 Gm25541-201ENSMUST00000116888 126 ntBASIC1.47□□□□□ -2.17
Pcdh9F8VPK8 Gm13345-201ENSMUST00000121928 228 ntBASIC1.47□□□□□ -2.17
Pcdh9F8VPK8 Gm20391-201ENSMUST00000174722 106 ntBASIC1.47□□□□□ -2.17
Pcdh9F8VPK8 Rnu6-ps2-201ENSMUST00000178059 107 ntBASIC1.47□□□□□ -2.17
Pcdh9F8VPK8 Gm26073-201ENSMUST00000179906 127 ntBASIC1.47□□□□□ -2.17
Pcdh9F8VPK8 Gm45544-201ENSMUST00000211130 88 ntBASIC1.47□□□□□ -2.17
Pcdh9F8VPK8 Gm25588-201ENSMUST00000082501 140 ntBASIC1.47□□□□□ -2.17
Pcdh9F8VPK8 Gm24523-201ENSMUST00000083965 132 ntBASIC1.47□□□□□ -2.17
Pcdh9F8VPK8 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
Pcdh9F8VPK8 Gm11334-201ENSMUST00000121969 156 ntBASIC1.46□□□□□ -2.18
Pcdh9F8VPK8 Gm26213-201ENSMUST00000158582 110 ntBASIC1.46□□□□□ -2.18
Pcdh9F8VPK8 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
Pcdh9F8VPK8 Gm44338-201ENSMUST00000198614 110 ntBASIC1.46□□□□□ -2.18
Pcdh9F8VPK8 Gm25081-201ENSMUST00000082534 108 ntBASIC1.46□□□□□ -2.18
Pcdh9F8VPK8 Snora20-201ENSMUST00000082703 128 ntBASIC1.46□□□□□ -2.18
Pcdh9F8VPK8 Gm23299-201ENSMUST00000082708 79 ntBASIC1.46□□□□□ -2.18
Pcdh9F8VPK8 Gm26326-201ENSMUST00000083070 129 ntBASIC1.46□□□□□ -2.18
Pcdh9F8VPK8 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
Pcdh9F8VPK8 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
Pcdh9F8VPK8 Gm25992-201ENSMUST00000102437 109 ntBASIC1.45□□□□□ -2.18
Pcdh9F8VPK8 Gm24232-201ENSMUST00000104314 132 ntBASIC1.45□□□□□ -2.18
Pcdh9F8VPK8 Gm22790-201ENSMUST00000157229 129 ntBASIC1.45□□□□□ -2.18
Pcdh9F8VPK8 Gm24677-201ENSMUST00000158755 150 ntBASIC1.45□□□□□ -2.18
Pcdh9F8VPK8 Gm17364-201ENSMUST00000163881 72 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
Pcdh9F8VPK8 AC153646.2-201ENSMUST00000220516 109 ntBASIC1.45□□□□□ -2.18
Pcdh9F8VPK8 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.45□□□□□ -2.18
Pcdh9F8VPK8 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
Pcdh9F8VPK8 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
Pcdh9F8VPK8 Gm27934-201ENSMUST00000158795 63 ntBASIC1.44□□□□□ -2.18
Pcdh9F8VPK8 Mir5104-201ENSMUST00000175319 94 ntBASIC1.44□□□□□ -2.18
Pcdh9F8VPK8 Gm37545-201ENSMUST00000186512 148 ntBASIC1.44□□□□□ -2.18
Pcdh9F8VPK8 Gm18665-201ENSMUST00000189783 270 ntBASIC1.44□□□□□ -2.18
Pcdh9F8VPK8 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC1.44□□□□□ -2.18
Pcdh9F8VPK8 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.44□□□□□ -2.18
Pcdh9F8VPK8 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
Pcdh9F8VPK8 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC1.44□□□□□ -2.18
Pcdh9F8VPK8 AC168880.2-201ENSMUST00000224488 201 ntBASIC1.44□□□□□ -2.18
Pcdh9F8VPK8 mt-Ta-201ENSMUST00000082398 69 ntBASIC1.44□□□□□ -2.18
Pcdh9F8VPK8 Gm25038-201ENSMUST00000082928 130 ntBASIC1.44□□□□□ -2.18
Pcdh9F8VPK8 Mir201-201ENSMUST00000083470 66 ntBASIC1.44□□□□□ -2.18
Pcdh9F8VPK8 Gm23947-201ENSMUST00000093636 107 ntBASIC1.44□□□□□ -2.18
Pcdh9F8VPK8 Mir544-201ENSMUST00000103813 78 ntBASIC1.43□□□□□ -2.18
Pcdh9F8VPK8 Gm14882-201ENSMUST00000117216 218 ntBASIC1.43□□□□□ -2.18
Pcdh9F8VPK8 Gm25958-201ENSMUST00000175114 71 ntBASIC1.43□□□□□ -2.18
Pcdh9F8VPK8 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC1.43□□□□□ -2.18
Pcdh9F8VPK8 Gm24638-201ENSMUST00000179807 132 ntBASIC1.43□□□□□ -2.18
Pcdh9F8VPK8 Gm44358-201ENSMUST00000196301 98 ntBASIC1.43□□□□□ -2.18
Pcdh9F8VPK8 Gm44976-201ENSMUST00000205543 261 ntBASIC1.43□□□□□ -2.18
Pcdh9F8VPK8 Gm16976-205ENSMUST00000227324 226 ntBASIC1.43□□□□□ -2.18
Pcdh9F8VPK8 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.43□□□□□ -2.18
Pcdh9F8VPK8 Mir301b-201ENSMUST00000102333 97 ntBASIC1.42□□□□□ -2.18
Pcdh9F8VPK8 Gm25068-201ENSMUST00000103895 110 ntBASIC1.42□□□□□ -2.18
Pcdh9F8VPK8 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC1.42□□□□□ -2.18
Pcdh9F8VPK8 Gm25882-201ENSMUST00000157784 85 ntBASIC1.42□□□□□ -2.18
Pcdh9F8VPK8 Gm23996-201ENSMUST00000158062 131 ntBASIC1.42□□□□□ -2.18
Pcdh9F8VPK8 Gm25364-201ENSMUST00000158851 107 ntBASIC1.42□□□□□ -2.18
Pcdh9F8VPK8 Gm22802-201ENSMUST00000175621 89 ntBASIC1.42□□□□□ -2.18
Pcdh9F8VPK8 Gm25936-201ENSMUST00000179952 114 ntBASIC1.42□□□□□ -2.18
Pcdh9F8VPK8 Ighv15-1-201ENSMUST00000194450 276 ntBASIC1.42□□□□□ -2.18
Pcdh9F8VPK8 Gm44408-201ENSMUST00000200205 66 ntBASIC1.42□□□□□ -2.18
Pcdh9F8VPK8 CT033781.2-201ENSMUST00000221113 153 ntBASIC1.42□□□□□ -2.18
Pcdh9F8VPK8 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 134.8 ms