Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Mir6388-201ENSMUST00000184417 75 ntBASIC2.16□□□□□ -2.06
Pcdh1F7BJK1 Gm7214-201ENSMUST00000222428 272 ntBASIC2.16□□□□□ -2.06
Pcdh1F7BJK1 Mir490-201ENSMUST00000093567 84 ntBASIC2.16□□□□□ -2.06
Pcdh1F7BJK1 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.15□□□□□ -2.06
Pcdh1F7BJK1 Mir682-201ENSMUST00000102281 96 ntBASIC2.15□□□□□ -2.07
Pcdh1F7BJK1 Gm24670-201ENSMUST00000104154 132 ntBASIC2.15□□□□□ -2.07
Pcdh1F7BJK1 Gm24650-201ENSMUST00000157105 103 ntBASIC2.15□□□□□ -2.07
Pcdh1F7BJK1 Gm24851-201ENSMUST00000158028 103 ntBASIC2.15□□□□□ -2.07
Pcdh1F7BJK1 Mir7118-201ENSMUST00000197760 61 ntBASIC2.15□□□□□ -2.07
Pcdh1F7BJK1 AC164612.2-202ENSMUST00000216314 253 ntBASIC2.15□□□□□ -2.07
Pcdh1F7BJK1 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.15□□□□□ -2.07
Pcdh1F7BJK1 Gm22622-201ENSMUST00000082870 129 ntBASIC2.15□□□□□ -2.07
Pcdh1F7BJK1 Gm22743-201ENSMUST00000083445 133 ntBASIC2.15□□□□□ -2.07
Pcdh1F7BJK1 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.15□□□□□ -2.07
Pcdh1F7BJK1 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC2.14□□□□□ -2.07
Pcdh1F7BJK1 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Pcdh1F7BJK1 Mir466k-201ENSMUST00000116774 122 ntBASIC2.14□□□□□ -2.07
Pcdh1F7BJK1 Gm22031-201ENSMUST00000116945 126 ntBASIC2.14□□□□□ -2.07
Pcdh1F7BJK1 Gm25544-201ENSMUST00000122676 120 ntBASIC2.14□□□□□ -2.07
Pcdh1F7BJK1 Gm26280-201ENSMUST00000157096 101 ntBASIC2.14□□□□□ -2.07
Pcdh1F7BJK1 Gm26345-201ENSMUST00000157534 120 ntBASIC2.14□□□□□ -2.07
Pcdh1F7BJK1 Gm22083-201ENSMUST00000157586 102 ntBASIC2.14□□□□□ -2.07
Pcdh1F7BJK1 Gm24000-201ENSMUST00000158063 89 ntBASIC2.14□□□□□ -2.07
Pcdh1F7BJK1 Gm16561-201ENSMUST00000163001 192 ntBASIC2.14□□□□□ -2.07
Pcdh1F7BJK1 n-R5s176-201ENSMUST00000082683 109 ntBASIC2.14□□□□□ -2.07
Pcdh1F7BJK1 Gm22866-201ENSMUST00000083947 177 ntBASIC2.14□□□□□ -2.07
Pcdh1F7BJK1 Gm43473-201ENSMUST00000200442 5997 ntBASIC2.14□□□□□ -2.07
Pcdh1F7BJK1 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
Pcdh1F7BJK1 n-R5s188-201ENSMUST00000122646 105 ntBASIC2.13□□□□□ -2.07
Pcdh1F7BJK1 n-R5s187-201ENSMUST00000122769 111 ntBASIC2.13□□□□□ -2.07
Pcdh1F7BJK1 Gm22332-201ENSMUST00000158072 126 ntBASIC2.13□□□□□ -2.07
Pcdh1F7BJK1 Gm22212-201ENSMUST00000158096 106 ntBASIC2.13□□□□□ -2.07
Pcdh1F7BJK1 Gm24771-201ENSMUST00000158508 137 ntBASIC2.13□□□□□ -2.07
Pcdh1F7BJK1 Gm23181-201ENSMUST00000158685 110 ntBASIC2.13□□□□□ -2.07
Pcdh1F7BJK1 Gm26004-201ENSMUST00000158804 116 ntBASIC2.13□□□□□ -2.07
Pcdh1F7BJK1 Gm26498-201ENSMUST00000177799 79 ntBASIC2.13□□□□□ -2.07
Pcdh1F7BJK1 Gm26230-201ENSMUST00000180141 79 ntBASIC2.13□□□□□ -2.07
Pcdh1F7BJK1 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC2.13□□□□□ -2.07
Pcdh1F7BJK1 Gm24313-201ENSMUST00000082561 133 ntBASIC2.13□□□□□ -2.07
Pcdh1F7BJK1 Gm25855-201ENSMUST00000082787 72 ntBASIC2.13□□□□□ -2.07
Pcdh1F7BJK1 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Pcdh1F7BJK1 Gm22674-201ENSMUST00000104413 131 ntBASIC2.12□□□□□ -2.07
Pcdh1F7BJK1 Gm23654-201ENSMUST00000116758 126 ntBASIC2.12□□□□□ -2.07
Pcdh1F7BJK1 Gm16510-201ENSMUST00000153501 249 ntBASIC2.12□□□□□ -2.07
Pcdh1F7BJK1 Gm24572-201ENSMUST00000175505 88 ntBASIC2.12□□□□□ -2.07
Pcdh1F7BJK1 AC136457.1-201ENSMUST00000224195 156 ntBASIC2.12□□□□□ -2.07
Pcdh1F7BJK1 Gm24661-201ENSMUST00000083205 104 ntBASIC2.12□□□□□ -2.07
Pcdh1F7BJK1 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Pcdh1F7BJK1 Gm42770-201ENSMUST00000199657 4155 ntBASIC2.12□□□□□ -2.07
Pcdh1F7BJK1 Gm3081-201ENSMUST00000193413 3025 ntBASIC2.12□□□□□ -2.07
Pcdh1F7BJK1 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.12□□□□□ -2.07
Pcdh1F7BJK1 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Pcdh1F7BJK1 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Pcdh1F7BJK1 Gm12309-201ENSMUST00000119889 182 ntBASIC2.11□□□□□ -2.07
Pcdh1F7BJK1 Gm22888-201ENSMUST00000158640 77 ntBASIC2.11□□□□□ -2.07
Pcdh1F7BJK1 AC163289.1-201ENSMUST00000215919 262 ntBASIC2.11□□□□□ -2.07
Pcdh1F7BJK1 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC2.11□□□□□ -2.07
Pcdh1F7BJK1 AC133517.1-203ENSMUST00000225570 390 ntBASIC2.11□□□□□ -2.07
Pcdh1F7BJK1 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Pcdh1F7BJK1 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Pcdh1F7BJK1 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Pcdh1F7BJK1 Gm26076-201ENSMUST00000104065 105 ntBASIC2.1□□□□□ -2.07
Pcdh1F7BJK1 Gm22545-201ENSMUST00000104350 132 ntBASIC2.1□□□□□ -2.07
Pcdh1F7BJK1 Gm26247-201ENSMUST00000116702 91 ntBASIC2.1□□□□□ -2.07
Pcdh1F7BJK1 Gm24656-201ENSMUST00000177548 132 ntBASIC2.1□□□□□ -2.07
Pcdh1F7BJK1 Gm37557-201ENSMUST00000191640 139 ntBASIC2.1□□□□□ -2.07
Pcdh1F7BJK1 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Pcdh1F7BJK1 Gm3724-201ENSMUST00000197957 349 ntBASIC2.1□□□□□ -2.07
Pcdh1F7BJK1 Gm45429-201ENSMUST00000209527 172 ntBASIC2.1□□□□□ -2.07
Pcdh1F7BJK1 AC126939.1-201ENSMUST00000224943 226 ntBASIC2.1□□□□□ -2.07
Pcdh1F7BJK1 Gm25796-201ENSMUST00000082645 163 ntBASIC2.1□□□□□ -2.07
Pcdh1F7BJK1 Gm25788-201ENSMUST00000082721 131 ntBASIC2.1□□□□□ -2.07
Pcdh1F7BJK1 Fau-ps1-201ENSMUST00000119675 252 ntBASIC2.09□□□□□ -2.07
Pcdh1F7BJK1 Gm24913-201ENSMUST00000157286 107 ntBASIC2.09□□□□□ -2.07
Pcdh1F7BJK1 Gm22554-201ENSMUST00000157798 147 ntBASIC2.09□□□□□ -2.07
Pcdh1F7BJK1 Gm20409-201ENSMUST00000173457 130 ntBASIC2.09□□□□□ -2.07
Pcdh1F7BJK1 Gm20477-201ENSMUST00000174028 280 ntBASIC2.09□□□□□ -2.07
Pcdh1F7BJK1 Sult1c2-ps2-201ENSMUST00000196414 276 ntBASIC2.09□□□□□ -2.07
Pcdh1F7BJK1 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Pcdh1F7BJK1 Gm22750-201ENSMUST00000102076 103 ntBASIC2.08□□□□□ -2.08
Pcdh1F7BJK1 Gm23656-201ENSMUST00000122626 112 ntBASIC2.08□□□□□ -2.08
Pcdh1F7BJK1 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.08□□□□□ -2.08
Pcdh1F7BJK1 Gm28270-201ENSMUST00000188550 109 ntBASIC2.08□□□□□ -2.08
Pcdh1F7BJK1 Gm28328-201ENSMUST00000188869 109 ntBASIC2.08□□□□□ -2.08
Pcdh1F7BJK1 mt-Ts2-201ENSMUST00000082416 59 ntBASIC2.08□□□□□ -2.08
Pcdh1F7BJK1 Snora20-201ENSMUST00000082703 128 ntBASIC2.08□□□□□ -2.08
Pcdh1F7BJK1 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
Pcdh1F7BJK1 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
Pcdh1F7BJK1 Gm22429-201ENSMUST00000158553 130 ntBASIC2.07□□□□□ -2.08
Pcdh1F7BJK1 Gm25978-201ENSMUST00000158698 90 ntBASIC2.07□□□□□ -2.08
Pcdh1F7BJK1 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC2.07□□□□□ -2.08
Pcdh1F7BJK1 Mir6377-201ENSMUST00000183760 114 ntBASIC2.07□□□□□ -2.08
Pcdh1F7BJK1 Trbv7-201ENSMUST00000193339 402 ntBASIC2.07□□□□□ -2.08
Pcdh1F7BJK1 mt-Tv-201ENSMUST00000082389 69 ntBASIC2.07□□□□□ -2.08
Pcdh1F7BJK1 Gm23507-201ENSMUST00000083078 107 ntBASIC2.07□□□□□ -2.08
Pcdh1F7BJK1 Gm23244-201ENSMUST00000083375 92 ntBASIC2.07□□□□□ -2.08
Pcdh1F7BJK1 Mir411-201ENSMUST00000083543 82 ntBASIC2.07□□□□□ -2.08
Pcdh1F7BJK1 Gm10730-201ENSMUST00000194097 2723 ntBASIC2.07□□□□□ -2.08
Pcdh1F7BJK1 Gm22752-201ENSMUST00000102083 109 ntBASIC2.06□□□□□ -2.08
Pcdh1F7BJK1 Gm26421-201ENSMUST00000104279 132 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 158.2 ms