Protein–RNA interactions for Protein: O60832

DKC1, H/ACA ribonucleoprotein complex subunit 4, humanhuman

Known RBP eCLIP

Length 514 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1O60832 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.45e-7■■□□□ 12.9
DKC1O60832 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.265e-7■■□□□ 12.9
DKC1O60832 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.165e-9■■□□□ 12.9
DKC1O60832 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC14.81□□□□□ -0.045e-7■■□□□ 12.9
DKC1O60832 SND1-209ENST00000470723 568 ntTSL 414.18□□□□□ -0.145e-7■■□□□ 12.9
DKC1O60832 PLEKHA2-209ENST00000617275 5582 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.325e-7■■□□□ 12.9
DKC1O60832 PLEKHA2-207ENST00000616834 3594 ntTSL 5 BASIC12.93□□□□□ -0.345e-7■■□□□ 12.9
DKC1O60832 PEG10-203ENST00000488574 2587 ntTSL 2 BASIC12.79□□□□□ -0.365e-7■■□□□ 12.9
DKC1O60832 TTC28-201ENST00000397906 11795 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.385e-9■■□□□ 12.9
DKC1O60832 EXOC2-201ENST00000230449 4449 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.545e-7■■□□□ 12.9
DKC1O60832 GSK3B-202ENST00000316626 1636 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.565e-7■■□□□ 12.9
DKC1O60832 DCAF12-201ENST00000361264 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.625e-7■■□□□ 12.9
DKC1O60832 SND1-213ENST00000486037 695 ntTSL 310.68□□□□□ -0.75e-7■■□□□ 12.9
DKC1O60832 ATP1A1-202ENST00000369494 698 ntTSL 310.14□□□□□ -0.795e-9■■□□□ 12.9
DKC1O60832 SND1-211ENST00000484767 460 ntTSL 49.78□□□□□ -0.845e-7■■□□□ 12.9
DKC1O60832 MAGI1-207ENST00000470990 2138 ntTSL 1 (best)8.87□□□□□ -0.995e-7■■□□□ 12.9
DKC1O60832 ATP1A1-206ENST00000463382 584 ntTSL 27.76□□□□□ -1.175e-9■■□□□ 12.9
DKC1O60832 SASH1-209ENST00000637469 523 ntTSL 47.64□□□□□ -1.195e-9■■□□□ 12.9
DKC1O60832 ASAP1-209ENST00000520927 742 ntTSL 56.49□□□□□ -1.372e-6■■□□□ 12.9
DKC1O60832 PLEKHA2-202ENST00000518939 669 ntTSL 56.15□□□□□ -1.425e-7■■□□□ 12.9
DKC1O60832 SND1-216ENST00000492840 472 ntTSL 55.74□□□□□ -1.495e-7■■□□□ 12.9
DKC1O60832 SASH1-203ENST00000470750 617 ntTSL 33.68□□□□□ -1.825e-9■■□□□ 12.9
DKC1O60832 TOMM20-201ENST00000366607 3387 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.511e-323■■□□□ 12.8
DKC1O60832 SNORA14B-201ENST00000384452 135 ntBASIC9.58□□□□□ -0.881e-323■■□□□ 12.8
DKC1O60832 RPL23-209ENST00000584056 549 ntTSL 211.8□□□□□ -0.521e-323■■□□□ 12.8
DKC1O60832 SNORA21-201ENST00000362423 132 ntBASIC6.92□□□□□ -1.31e-323■■□□□ 12.8
DKC1O60832 MT-TG-201ENST00000387429 68 ntBASIC-0.82□□□□□ -2.545e-39■■□□□ 12.7
DKC1O60832 APOH-203ENST00000581797 748 ntTSL 36.94□□□□□ -1.32e-35■■□□□ 12.6
DKC1O60832 APOH-202ENST00000577982 707 ntTSL 54.64□□□□□ -1.672e-35■■□□□ 12.6
DKC1O60832 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.852e-35■■□□□ 12.6
DKC1O60832 SNHG1-214ENST00000540865 784 ntTSL 55.08□□□□□ -1.62e-36■■□□□ 12.6
DKC1O60832 SNHG1-202ENST00000535689 550 ntTSL 23.13□□□□□ -1.912e-36■■□□□ 12.6
DKC1O60832 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.515e-15■■□□□ 12.6
DKC1O60832 MMD-202ENST00000571578 670 ntTSL 319.51■□□□□ 0.715e-15■■□□□ 12.6
DKC1O60832 SNORD63B-201ENST00000411005 70 ntBASIC-0.41□□□□□ -2.485e-15■■□□□ 12.6
DKC1O60832 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.551e-6■■□□□ 12.6
DKC1O60832 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.411e-6■■□□□ 12.6
DKC1O60832 AKT1-215ENST00000555926 553 ntTSL 321.81■■□□□ 1.081e-6■■□□□ 12.6
DKC1O60832 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.051e-6■■□□□ 12.6
DKC1O60832 AKT1-204ENST00000544168 1564 ntTSL 218.92■□□□□ 0.621e-6■■□□□ 12.6
DKC1O60832 AKT1-218ENST00000557552 8396 ntTSL 518.62■□□□□ 0.571e-6■■□□□ 12.6
DKC1O60832 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.311e-6■■□□□ 12.6
DKC1O60832 AKT1-208ENST00000554581 3916 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.331e-6■■□□□ 12.6
DKC1O60832 AKT1-212ENST00000555380 534 ntTSL 412.88□□□□□ -0.351e-6■■□□□ 12.6
DKC1O60832 AKT1-202ENST00000402615 3913 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.441e-6■■□□□ 12.6
DKC1O60832 LIG1-204ENST00000542460 1527 ntTSL 219.21■□□□□ 0.671e-6■■□□□ 12.5
DKC1O60832 LIG1-206ENST00000594067 2697 ntTSL 217.45■□□□□ 0.381e-6■■□□□ 12.5
DKC1O60832 LIG1-208ENST00000595758 606 ntTSL 416.12■□□□□ 0.171e-6■■□□□ 12.5
DKC1O60832 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.021e-6■■□□□ 12.5
DKC1O60832 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.061e-6■■□□□ 12.5
DKC1O60832 LIG1-212ENST00000596549 580 ntTSL 414.61□□□□□ -0.071e-6■■□□□ 12.5
DKC1O60832 LIG1-217ENST00000599165 570 ntTSL 413.58□□□□□ -0.241e-6■■□□□ 12.5
DKC1O60832 LIG1-201ENST00000263274 3384 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.281e-6■■□□□ 12.5
DKC1O60832 LIG1-221ENST00000613670 3949 ntTSL 1 (best) BASIC13.3□□□□□ -0.281e-6■■□□□ 12.5
DKC1O60832 LIG1-207ENST00000594759 4102 ntTSL 1 (best)13.29□□□□□ -0.281e-6■■□□□ 12.5
DKC1O60832 LIG1-220ENST00000601091 3957 ntTSL 511.15□□□□□ -0.621e-6■■□□□ 12.5
DKC1O60832 LIG1-209ENST00000596104 531 ntTSL 311.14□□□□□ -0.631e-6■■□□□ 12.5
DKC1O60832 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.455e-7■■□□□ 12.5
DKC1O60832 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC14.74□□□□□ -0.055e-7■■□□□ 12.5
DKC1O60832 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.115e-7■■□□□ 12.5
DKC1O60832 RPS3-205ENST00000525933 1307 ntTSL 511.43□□□□□ -0.581e-323■■□□□ 12.5
DKC1O60832 RPS3-204ENST00000525690 421 ntTSL 311.12□□□□□ -0.631e-323■■□□□ 12.5
DKC1O60832 RPS3-215ENST00000530170 531 ntTSL 59.96□□□□□ -0.821e-323■■□□□ 12.5
DKC1O60832 SNORD15B-201ENST00000384714 146 ntBASIC3.54□□□□□ -1.841e-323■■□□□ 12.5
DKC1O60832 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.39e-21■■□□□ 12.4
DKC1O60832 XPO1-206ENST00000428210 6776 ntTSL 214.98□□□□□ -0.019e-21■■□□□ 12.4
DKC1O60832 XPO1-203ENST00000406957 3479 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.929e-21■■□□□ 12.4
DKC1O60832 XPO1-207ENST00000436018 318 ntTSL 44.46□□□□□ -1.79e-21■■□□□ 12.4
DKC1O60832 XPO1-209ENST00000443240 565 ntTSL 44.17□□□□□ -1.749e-21■■□□□ 12.4
DKC1O60832 NAP1L1-222ENST00000551992 1074 ntTSL 527.19■■□□□ 1.943e-10■■□□□ 12.4
DKC1O60832 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.273e-10■■□□□ 12.4
DKC1O60832 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.013e-10■■□□□ 12.4
DKC1O60832 NAP1L1-214ENST00000548273 818 ntTSL 314.39□□□□□ -0.113e-10■■□□□ 12.4
DKC1O60832 NAP1L1-226ENST00000552342 1526 ntTSL 5 BASIC13.69□□□□□ -0.223e-10■■□□□ 12.4
DKC1O60832 NAP1L1-217ENST00000549988 544 ntTSL 313.62□□□□□ -0.233e-10■■□□□ 12.4
DKC1O60832 NAP1L1-206ENST00000544816 1597 ntTSL 2 BASIC13.61□□□□□ -0.233e-10■■□□□ 12.4
DKC1O60832 NAP1L1-210ENST00000547773 1967 ntTSL 5 BASIC12.58□□□□□ -0.43e-10■■□□□ 12.4
DKC1O60832 NAP1L1-205ENST00000542344 1675 ntTSL 2 BASIC12.51□□□□□ -0.413e-10■■□□□ 12.4
DKC1O60832 NAP1L1-215ENST00000549479 573 ntTSL 212.15□□□□□ -0.463e-10■■□□□ 12.4
DKC1O60832 NAP1L1-213ENST00000548044 1339 ntTSL 5 BASIC11.3□□□□□ -0.63e-10■■□□□ 12.4
DKC1O60832 NAP1L1-203ENST00000431879 2031 ntTSL 2 BASIC10.89□□□□□ -0.673e-10■■□□□ 12.4
DKC1O60832 NAP1L1-209ENST00000547704 760 ntTSL 510.84□□□□□ -0.673e-10■■□□□ 12.4
DKC1O60832 NAP1L1-221ENST00000551600 786 ntTSL 510.84□□□□□ -0.673e-10■■□□□ 12.4
DKC1O60832 NAP1L1-216ENST00000549596 1838 ntTSL 2 BASIC10.8□□□□□ -0.683e-10■■□□□ 12.4
DKC1O60832 NAP1L1-207ENST00000547479 623 ntTSL 510.75□□□□□ -0.693e-10■■□□□ 12.4
DKC1O60832 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.253e-10■■□□□ 12.4
DKC1O60832 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC5.37□□□□□ -1.553e-10■■□□□ 12.4
DKC1O60832 NAP1L1-224ENST00000552056 1981 ntTSL 53.9□□□□□ -1.793e-10■■□□□ 12.4
DKC1O60832 NAP1L1-218ENST00000550934 851 ntTSL 53.8□□□□□ -1.83e-10■■□□□ 12.4
DKC1O60832 SEC24A-201ENST00000322887 2700 ntTSL 1 (best) BASIC12.46□□□□□ -0.422e-16■■□□□ 12.4
DKC1O60832 SEC24A-202ENST00000398844 6299 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.842e-16■■□□□ 12.4
DKC1O60832 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.921e-8■■□□□ 12.3
DKC1O60832 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.81e-8■■□□□ 12.3
DKC1O60832 SMAP2-202ENST00000372718 2939 ntAPPRIS P1 TSL 1 (best)18.7■□□□□ 0.581e-6■■□□□ 12.3
DKC1O60832 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.561e-8■■□□□ 12.3
DKC1O60832 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.221e-8■■□□□ 12.3
DKC1O60832 E2F3-203ENST00000613242 4094 ntTSL 5 BASIC13.15□□□□□ -0.31e-8■■□□□ 12.3
DKC1O60832 E2F3-202ENST00000535432 4425 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.651e-8■■□□□ 12.3
DKC1O60832 SMAP2-201ENST00000372708 2473 ntTSL 1 (best)10.14□□□□□ -0.791e-6■■□□□ 12.3
DKC1O60832 EVA1A-209ENST00000486489 524 ntTSL 221.91■■□□□ 1.13e-13■■□□□ 12.3
Retrieved 100 of 8,567 protein–RNA pairs in 137.5 ms