Protein–RNA interactions for Protein: Q9ER60

Scn4a, Sodium channel protein type 4 subunit alpha, mousemouse

Predictions only

Length 1,841 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4aQ9ER60 Gm22515-201ENSMUST00000158273 305 ntBASIC0.92□□□□□ -2.26
Scn4aQ9ER60 Gm22944-201ENSMUST00000158662 133 ntBASIC0.92□□□□□ -2.26
Scn4aQ9ER60 Mir15a-201ENSMUST00000175266 84 ntBASIC0.92□□□□□ -2.26
Scn4aQ9ER60 Gm12080-201ENSMUST00000119821 1883 ntBASIC0.92□□□□□ -2.26
Scn4aQ9ER60 Gm25011-201ENSMUST00000158398 126 ntBASIC0.92□□□□□ -2.26
Scn4aQ9ER60 Gm20630-201ENSMUST00000177387 551 ntBASIC0.92□□□□□ -2.26
Scn4aQ9ER60 Gm28921-201ENSMUST00000190219 378 ntBASIC0.92□□□□□ -2.26
Scn4aQ9ER60 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC0.92□□□□□ -2.26
Scn4aQ9ER60 AC154994.1-201ENSMUST00000217395 302 ntBASIC0.92□□□□□ -2.26
Scn4aQ9ER60 Gm29818-201ENSMUST00000218070 165 ntBASIC0.92□□□□□ -2.26
Scn4aQ9ER60 AL603630.1-201ENSMUST00000214781 147 ntBASIC0.91□□□□□ -2.26
Scn4aQ9ER60 AC164612.2-202ENSMUST00000216314 253 ntBASIC0.91□□□□□ -2.26
Scn4aQ9ER60 Gm23451-201ENSMUST00000083328 122 ntBASIC0.91□□□□□ -2.26
Scn4aQ9ER60 Gm26479-201ENSMUST00000122620 106 ntBASIC0.9□□□□□ -2.27
Scn4aQ9ER60 Gm26213-201ENSMUST00000158582 110 ntBASIC0.9□□□□□ -2.27
Scn4aQ9ER60 AC109214.2-201ENSMUST00000220089 358 ntBASIC0.9□□□□□ -2.27
Scn4aQ9ER60 Gm25135-201ENSMUST00000082648 143 ntBASIC0.9□□□□□ -2.27
Scn4aQ9ER60 Snord96a-201ENSMUST00000082791 81 ntBASIC0.9□□□□□ -2.27
Scn4aQ9ER60 Gm24616-201ENSMUST00000083274 139 ntBASIC0.9□□□□□ -2.27
Scn4aQ9ER60 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC0.89□□□□□ -2.27
Scn4aQ9ER60 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC0.89□□□□□ -2.27
Scn4aQ9ER60 Gm27545-201ENSMUST00000184755 202 ntBASIC0.89□□□□□ -2.27
Scn4aQ9ER60 Gm28344-201ENSMUST00000185704 279 ntBASIC0.89□□□□□ -2.27
Scn4aQ9ER60 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
Scn4aQ9ER60 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC0.89□□□□□ -2.27
Scn4aQ9ER60 Gm27723-201ENSMUST00000157398 63 ntBASIC0.89□□□□□ -2.27
Scn4aQ9ER60 Gm24777-201ENSMUST00000157644 107 ntBASIC0.89□□□□□ -2.27
Scn4aQ9ER60 Gm24345-201ENSMUST00000158706 124 ntBASIC0.89□□□□□ -2.27
Scn4aQ9ER60 Gm24221-201ENSMUST00000158833 313 ntBASIC0.89□□□□□ -2.27
Scn4aQ9ER60 Gm44977-201ENSMUST00000205283 420 ntBASIC0.89□□□□□ -2.27
Scn4aQ9ER60 Gm22802-201ENSMUST00000175621 89 ntBASIC0.88□□□□□ -2.27
Scn4aQ9ER60 Gm42594-201ENSMUST00000199511 246 ntBASIC0.88□□□□□ -2.27
Scn4aQ9ER60 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC0.88□□□□□ -2.27
Scn4aQ9ER60 Gm9795-201ENSMUST00000062156 693 ntBASIC0.88□□□□□ -2.27
Scn4aQ9ER60 Gm23345-201ENSMUST00000083817 150 ntBASIC0.88□□□□□ -2.27
Scn4aQ9ER60 Gm13922-201ENSMUST00000119505 156 ntBASIC0.87□□□□□ -2.27
Scn4aQ9ER60 Gm13711-201ENSMUST00000119708 453 ntBASIC0.87□□□□□ -2.27
Scn4aQ9ER60 n-R5s157-201ENSMUST00000122543 121 ntBASIC0.87□□□□□ -2.27
Scn4aQ9ER60 Gm24909-201ENSMUST00000157290 280 ntBASIC0.87□□□□□ -2.27
Scn4aQ9ER60 Gm22074-201ENSMUST00000158595 113 ntBASIC0.87□□□□□ -2.27
Scn4aQ9ER60 Gm29022-201ENSMUST00000190702 225 ntBASIC0.87□□□□□ -2.27
Scn4aQ9ER60 Gm44055-201ENSMUST00000204376 247 ntBASIC0.87□□□□□ -2.27
Scn4aQ9ER60 Gm45688-201ENSMUST00000210002 101 ntBASIC0.87□□□□□ -2.27
Scn4aQ9ER60 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
Scn4aQ9ER60 Mir880-201ENSMUST00000104809 78 ntBASIC0.87□□□□□ -2.27
Scn4aQ9ER60 Gm13339-201ENSMUST00000120651 510 ntBASIC0.87□□□□□ -2.27
Scn4aQ9ER60 Gm22814-201ENSMUST00000157452 104 ntBASIC0.87□□□□□ -2.27
Scn4aQ9ER60 Gm26236-201ENSMUST00000175536 137 ntBASIC0.87□□□□□ -2.27
Scn4aQ9ER60 Gm27521-201ENSMUST00000184022 64 ntBASIC0.87□□□□□ -2.27
Scn4aQ9ER60 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC0.87□□□□□ -2.27
Scn4aQ9ER60 Gm44301-201ENSMUST00000200362 143 ntBASIC0.87□□□□□ -2.27
Scn4aQ9ER60 Gm24401-201ENSMUST00000157868 91 ntBASIC0.86□□□□□ -2.27
Scn4aQ9ER60 Gm44989-201ENSMUST00000204749 217 ntBASIC0.86□□□□□ -2.27
Scn4aQ9ER60 Gm24527-201ENSMUST00000082920 107 ntBASIC0.86□□□□□ -2.27
Scn4aQ9ER60 Snord32a-201ENSMUST00000083285 83 ntBASIC0.86□□□□□ -2.27
Scn4aQ9ER60 Mir92-2-201ENSMUST00000083679 91 ntBASIC0.86□□□□□ -2.27
Scn4aQ9ER60 AC160984.1-201ENSMUST00000225855 3154 ntBASIC0.85□□□□□ -2.27
Scn4aQ9ER60 Gm6272-201ENSMUST00000121256 171 ntBASIC0.85□□□□□ -2.27
Scn4aQ9ER60 Gm23339-201ENSMUST00000158962 139 ntBASIC0.85□□□□□ -2.27
Scn4aQ9ER60 Gm16404-201ENSMUST00000177739 468 ntBASIC0.85□□□□□ -2.27
Scn4aQ9ER60 Gm14598-201ENSMUST00000180109 468 ntBASIC0.85□□□□□ -2.27
Scn4aQ9ER60 Gm14625-201ENSMUST00000180231 468 ntBASIC0.85□□□□□ -2.27
Scn4aQ9ER60 Gm25697-201ENSMUST00000082902 98 ntBASIC0.85□□□□□ -2.27
Scn4aQ9ER60 Gm26207-201ENSMUST00000082909 104 ntBASIC0.85□□□□□ -2.27
Scn4aQ9ER60 Mir181b-2-201ENSMUST00000083644 89 ntBASIC0.85□□□□□ -2.27
Scn4aQ9ER60 Gm15002-201ENSMUST00000118406 452 ntBASIC0.85□□□□□ -2.27
Scn4aQ9ER60 Gm14906-201ENSMUST00000119265 390 ntBASIC0.85□□□□□ -2.27
Scn4aQ9ER60 Gm23114-201ENSMUST00000158478 117 ntBASIC0.85□□□□□ -2.27
Scn4aQ9ER60 Gm23194-201ENSMUST00000158813 105 ntBASIC0.85□□□□□ -2.27
Scn4aQ9ER60 CT033781.2-201ENSMUST00000221113 153 ntBASIC0.85□□□□□ -2.27
Scn4aQ9ER60 Gm14914-201ENSMUST00000117576 2031 ntBASIC0.84□□□□□ -2.27
Scn4aQ9ER60 Gm24375-201ENSMUST00000104397 132 ntBASIC0.84□□□□□ -2.28
Scn4aQ9ER60 Trav5d-3-201ENSMUST00000170041 270 ntBASIC0.84□□□□□ -2.28
Scn4aQ9ER60 Gm44057-201ENSMUST00000204547 96 ntBASIC0.84□□□□□ -2.28
Scn4aQ9ER60 AC154328.1-201ENSMUST00000225875 307 ntBASIC0.84□□□□□ -2.28
Scn4aQ9ER60 AC158981.3-202ENSMUST00000228906 523 ntBASIC0.84□□□□□ -2.28
Scn4aQ9ER60 Mir669a-7-201ENSMUST00000180364 87 ntBASIC0.83□□□□□ -2.28
Scn4aQ9ER60 Mir669a-6-201ENSMUST00000196127 87 ntBASIC0.83□□□□□ -2.28
Scn4aQ9ER60 Gm44325-201ENSMUST00000196757 77 ntBASIC0.83□□□□□ -2.28
Scn4aQ9ER60 Mir669a-12-201ENSMUST00000197274 87 ntBASIC0.83□□□□□ -2.28
Scn4aQ9ER60 Mir669a-5-201ENSMUST00000197439 87 ntBASIC0.83□□□□□ -2.28
Scn4aQ9ER60 Mir669a-10-201ENSMUST00000197745 87 ntBASIC0.83□□□□□ -2.28
Scn4aQ9ER60 Mir669a-11-201ENSMUST00000197952 87 ntBASIC0.83□□□□□ -2.28
Scn4aQ9ER60 Mir669a-4-201ENSMUST00000198665 87 ntBASIC0.83□□□□□ -2.28
Scn4aQ9ER60 Mir669a-9-201ENSMUST00000200087 87 ntBASIC0.83□□□□□ -2.28
Scn4aQ9ER60 Mir669a-8-201ENSMUST00000200268 87 ntBASIC0.83□□□□□ -2.28
Scn4aQ9ER60 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC0.83□□□□□ -2.28
Scn4aQ9ER60 Gm13801-201ENSMUST00000120750 160 ntBASIC0.82□□□□□ -2.28
Scn4aQ9ER60 Gm25544-201ENSMUST00000122676 120 ntBASIC0.82□□□□□ -2.28
Scn4aQ9ER60 Gm22984-201ENSMUST00000122751 122 ntBASIC0.82□□□□□ -2.28
Scn4aQ9ER60 AC159896.1-201ENSMUST00000215264 215 ntBASIC0.82□□□□□ -2.28
Scn4aQ9ER60 Mir33-201ENSMUST00000083531 69 ntBASIC0.82□□□□□ -2.28
Scn4aQ9ER60 Gm23907-201ENSMUST00000104595 189 ntBASIC0.82□□□□□ -2.28
Scn4aQ9ER60 Mir466f-2-201ENSMUST00000104805 94 ntBASIC0.82□□□□□ -2.28
Scn4aQ9ER60 Gm24629-201ENSMUST00000122762 89 ntBASIC0.82□□□□□ -2.28
Scn4aQ9ER60 Gm25663-201ENSMUST00000157698 135 ntBASIC0.82□□□□□ -2.28
Scn4aQ9ER60 Gm22887-201ENSMUST00000178586 107 ntBASIC0.82□□□□□ -2.28
Scn4aQ9ER60 Gm22283-201ENSMUST00000082556 161 ntBASIC0.82□□□□□ -2.28
Scn4aQ9ER60 Gm24311-201ENSMUST00000082570 104 ntBASIC0.82□□□□□ -2.28
Scn4aQ9ER60 n-R5s70-201ENSMUST00000122650 116 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 76,532 protein–RNA pairs in 226.7 ms