Protein–RNA interactions for Protein: Q9DCN7

Rnft1, E3 ubiquitin-protein ligase RNFT1, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnft1Q9DCN7 Gm25796-201ENSMUST00000082645 163 ntBASIC2.23□□□□□ -2.05
Rnft1Q9DCN7 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Rnft1Q9DCN7 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Rnft1Q9DCN7 Gm23654-201ENSMUST00000116758 126 ntBASIC2.22□□□□□ -2.05
Rnft1Q9DCN7 Gm24937-201ENSMUST00000122597 134 ntBASIC2.22□□□□□ -2.05
Rnft1Q9DCN7 Gm24559-201ENSMUST00000157519 121 ntBASIC2.22□□□□□ -2.05
Rnft1Q9DCN7 Gm25769-201ENSMUST00000158569 127 ntBASIC2.22□□□□□ -2.05
Rnft1Q9DCN7 Gm26864-201ENSMUST00000181346 156 ntBASIC2.22□□□□□ -2.05
Rnft1Q9DCN7 Mir6905-201ENSMUST00000184228 70 ntBASIC2.22□□□□□ -2.05
Rnft1Q9DCN7 Gm16976-205ENSMUST00000227324 226 ntBASIC2.22□□□□□ -2.05
Rnft1Q9DCN7 Mir29c-201ENSMUST00000083614 88 ntBASIC2.22□□□□□ -2.05
Rnft1Q9DCN7 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
Rnft1Q9DCN7 Gm33962-201ENSMUST00000182643 2592 ntBASIC2.22□□□□□ -2.05
Rnft1Q9DCN7 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.22□□□□□ -2.05
Rnft1Q9DCN7 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Rnft1Q9DCN7 Gm24049-201ENSMUST00000102409 100 ntBASIC2.21□□□□□ -2.06
Rnft1Q9DCN7 Gm44489-201ENSMUST00000104619 97 ntBASIC2.21□□□□□ -2.06
Rnft1Q9DCN7 Gm24900-201ENSMUST00000158128 134 ntBASIC2.21□□□□□ -2.06
Rnft1Q9DCN7 Gm25866-201ENSMUST00000158245 112 ntBASIC2.21□□□□□ -2.06
Rnft1Q9DCN7 Gm23113-201ENSMUST00000158477 99 ntBASIC2.21□□□□□ -2.06
Rnft1Q9DCN7 Gm45791-201ENSMUST00000212908 352 ntBASIC2.21□□□□□ -2.06
Rnft1Q9DCN7 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC2.21□□□□□ -2.06
Rnft1Q9DCN7 Gm22306-201ENSMUST00000082692 107 ntBASIC2.21□□□□□ -2.06
Rnft1Q9DCN7 Snord118-201ENSMUST00000082965 135 ntBASIC2.21□□□□□ -2.06
Rnft1Q9DCN7 Gm42635-201ENSMUST00000200266 2571 ntBASIC2.21□□□□□ -2.06
Rnft1Q9DCN7 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
Rnft1Q9DCN7 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.21□□□□□ -2.06
Rnft1Q9DCN7 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
Rnft1Q9DCN7 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC2.2□□□□□ -2.06
Rnft1Q9DCN7 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC2.2□□□□□ -2.06
Rnft1Q9DCN7 Gm26074-201ENSMUST00000104063 129 ntBASIC2.2□□□□□ -2.06
Rnft1Q9DCN7 Gm25978-201ENSMUST00000158698 90 ntBASIC2.2□□□□□ -2.06
Rnft1Q9DCN7 Gm28669-201ENSMUST00000188400 100 ntBASIC2.2□□□□□ -2.06
Rnft1Q9DCN7 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
Rnft1Q9DCN7 Gm6109-201ENSMUST00000223297 348 ntBASIC2.2□□□□□ -2.06
Rnft1Q9DCN7 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Rnft1Q9DCN7 Gm25091-201ENSMUST00000103997 71 ntBASIC2.19□□□□□ -2.06
Rnft1Q9DCN7 Gm22782-201ENSMUST00000104082 132 ntBASIC2.19□□□□□ -2.06
Rnft1Q9DCN7 Gm15281-201ENSMUST00000125181 351 ntBASIC2.19□□□□□ -2.06
Rnft1Q9DCN7 Gm23253-201ENSMUST00000157441 104 ntBASIC2.19□□□□□ -2.06
Rnft1Q9DCN7 Gm35736-201ENSMUST00000203681 313 ntBASIC2.19□□□□□ -2.06
Rnft1Q9DCN7 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.19□□□□□ -2.06
Rnft1Q9DCN7 Gm22866-201ENSMUST00000083947 177 ntBASIC2.19□□□□□ -2.06
Rnft1Q9DCN7 Mir6376-201ENSMUST00000185149 131 ntBASIC2.18□□□□□ -2.06
Rnft1Q9DCN7 Gm22950-201ENSMUST00000082776 107 ntBASIC2.18□□□□□ -2.06
Rnft1Q9DCN7 Snord104-201ENSMUST00000083192 70 ntBASIC2.18□□□□□ -2.06
Rnft1Q9DCN7 Mir7-1-201ENSMUST00000083500 108 ntBASIC2.18□□□□□ -2.06
Rnft1Q9DCN7 Mir423-201ENSMUST00000083584 109 ntBASIC2.18□□□□□ -2.06
Rnft1Q9DCN7 Gm23038-201ENSMUST00000083873 104 ntBASIC2.18□□□□□ -2.06
Rnft1Q9DCN7 Gm26420-201ENSMUST00000104273 103 ntBASIC2.17□□□□□ -2.06
Rnft1Q9DCN7 Mir293-201ENSMUST00000104841 80 ntBASIC2.17□□□□□ -2.06
Rnft1Q9DCN7 Gm14937-201ENSMUST00000119709 208 ntBASIC2.17□□□□□ -2.06
Rnft1Q9DCN7 Gm14709-201ENSMUST00000121225 304 ntBASIC2.17□□□□□ -2.06
Rnft1Q9DCN7 Gm22079-201ENSMUST00000157592 106 ntBASIC2.17□□□□□ -2.06
Rnft1Q9DCN7 Rnu7-201ENSMUST00000158458 62 ntBASIC2.17□□□□□ -2.06
Rnft1Q9DCN7 Gm26498-201ENSMUST00000177799 79 ntBASIC2.17□□□□□ -2.06
Rnft1Q9DCN7 Gm26230-201ENSMUST00000180141 79 ntBASIC2.17□□□□□ -2.06
Rnft1Q9DCN7 AC127371.3-201ENSMUST00000228129 415 ntBASIC2.17□□□□□ -2.06
Rnft1Q9DCN7 AC124456.1-201ENSMUST00000217391 2597 ntBASIC2.17□□□□□ -2.06
Rnft1Q9DCN7 Gm25878-201ENSMUST00000104327 93 ntBASIC2.16□□□□□ -2.06
Rnft1Q9DCN7 Gm22279-201ENSMUST00000157200 93 ntBASIC2.16□□□□□ -2.06
Rnft1Q9DCN7 Gm22099-201ENSMUST00000157925 123 ntBASIC2.16□□□□□ -2.06
Rnft1Q9DCN7 Gm23033-201ENSMUST00000157996 134 ntBASIC2.16□□□□□ -2.06
Rnft1Q9DCN7 Gm22517-201ENSMUST00000158265 136 ntBASIC2.16□□□□□ -2.06
Rnft1Q9DCN7 Gm23005-201ENSMUST00000158950 136 ntBASIC2.16□□□□□ -2.06
Rnft1Q9DCN7 Gm24816-201ENSMUST00000175311 151 ntBASIC2.16□□□□□ -2.06
Rnft1Q9DCN7 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
Rnft1Q9DCN7 Mir547-201ENSMUST00000102051 78 ntBASIC2.15□□□□□ -2.07
Rnft1Q9DCN7 Gm26421-201ENSMUST00000104279 132 ntBASIC2.15□□□□□ -2.07
Rnft1Q9DCN7 Gm24632-201ENSMUST00000122770 323 ntBASIC2.15□□□□□ -2.07
Rnft1Q9DCN7 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Rnft1Q9DCN7 Gm22093-201ENSMUST00000158980 111 ntBASIC2.15□□□□□ -2.07
Rnft1Q9DCN7 Ighv1-1-201ENSMUST00000194912 291 ntBASIC2.15□□□□□ -2.07
Rnft1Q9DCN7 Snora69-201ENSMUST00000083708 131 ntBASIC2.15□□□□□ -2.07
Rnft1Q9DCN7 Snord7-201ENSMUST00000083781 97 ntBASIC2.15□□□□□ -2.07
Rnft1Q9DCN7 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.14□□□□□ -2.07
Rnft1Q9DCN7 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC2.14□□□□□ -2.07
Rnft1Q9DCN7 Gm23803-201ENSMUST00000104610 132 ntBASIC2.14□□□□□ -2.07
Rnft1Q9DCN7 n-R5s15-201ENSMUST00000122635 111 ntBASIC2.14□□□□□ -2.07
Rnft1Q9DCN7 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC2.14□□□□□ -2.07
Rnft1Q9DCN7 Gm22387-201ENSMUST00000158191 131 ntBASIC2.14□□□□□ -2.07
Rnft1Q9DCN7 Gm23090-201ENSMUST00000177331 78 ntBASIC2.14□□□□□ -2.07
Rnft1Q9DCN7 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Rnft1Q9DCN7 Gm27991-201ENSMUST00000184804 137 ntBASIC2.14□□□□□ -2.07
Rnft1Q9DCN7 AC155839.1-201ENSMUST00000200105 147 ntBASIC2.14□□□□□ -2.07
Rnft1Q9DCN7 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.14□□□□□ -2.07
Rnft1Q9DCN7 Gm26168-201ENSMUST00000083787 112 ntBASIC2.14□□□□□ -2.07
Rnft1Q9DCN7 Gm25627-201ENSMUST00000084003 153 ntBASIC2.14□□□□□ -2.07
Rnft1Q9DCN7 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC2.14□□□□□ -2.07
Rnft1Q9DCN7 Gm22731-201ENSMUST00000158086 94 ntBASIC2.13□□□□□ -2.07
Rnft1Q9DCN7 Gm24922-201ENSMUST00000158511 102 ntBASIC2.13□□□□□ -2.07
Rnft1Q9DCN7 Gm25771-201ENSMUST00000158565 144 ntBASIC2.13□□□□□ -2.07
Rnft1Q9DCN7 Mir7068-201ENSMUST00000183439 74 ntBASIC2.13□□□□□ -2.07
Rnft1Q9DCN7 Gm37557-201ENSMUST00000191640 139 ntBASIC2.13□□□□□ -2.07
Rnft1Q9DCN7 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC2.13□□□□□ -2.07
Rnft1Q9DCN7 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC2.13□□□□□ -2.07
Rnft1Q9DCN7 Mir34a-201ENSMUST00000083559 102 ntBASIC2.13□□□□□ -2.07
Rnft1Q9DCN7 Mir93-201ENSMUST00000083593 88 ntBASIC2.13□□□□□ -2.07
Rnft1Q9DCN7 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
Rnft1Q9DCN7 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 147.1 ms