Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Gm22626-201ENSMUST00000116990 126 ntBASIC1.27□□□□□ -2.21
Ddx28Q9CWT6 n-R5s87-201ENSMUST00000122752 116 ntBASIC1.27□□□□□ -2.21
Ddx28Q9CWT6 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC1.27□□□□□ -2.21
Ddx28Q9CWT6 Gm24761-201ENSMUST00000179589 127 ntBASIC1.27□□□□□ -2.21
Ddx28Q9CWT6 Gm24488-201ENSMUST00000179934 127 ntBASIC1.27□□□□□ -2.21
Ddx28Q9CWT6 Gm25701-201ENSMUST00000179988 127 ntBASIC1.27□□□□□ -2.21
Ddx28Q9CWT6 Gm26431-201ENSMUST00000180199 127 ntBASIC1.27□□□□□ -2.21
Ddx28Q9CWT6 Gm24523-201ENSMUST00000083965 132 ntBASIC1.27□□□□□ -2.21
Ddx28Q9CWT6 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
Ddx28Q9CWT6 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
Ddx28Q9CWT6 Mir466p-201ENSMUST00000103925 89 ntBASIC1.26□□□□□ -2.21
Ddx28Q9CWT6 Gm25759-201ENSMUST00000103988 129 ntBASIC1.26□□□□□ -2.21
Ddx28Q9CWT6 Gm11857-201ENSMUST00000119817 324 ntBASIC1.26□□□□□ -2.21
Ddx28Q9CWT6 Gm25834-201ENSMUST00000158916 101 ntBASIC1.26□□□□□ -2.21
Ddx28Q9CWT6 Gm27711-201ENSMUST00000183802 118 ntBASIC1.26□□□□□ -2.21
Ddx28Q9CWT6 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
Ddx28Q9CWT6 AC122320.1-201ENSMUST00000227233 105 ntBASIC1.26□□□□□ -2.21
Ddx28Q9CWT6 Gm25855-201ENSMUST00000082787 72 ntBASIC1.26□□□□□ -2.21
Ddx28Q9CWT6 BC022960-201ENSMUST00000119987 1815 ntBASIC1.25□□□□□ -2.21
Ddx28Q9CWT6 Gm24865-201ENSMUST00000103246 96 ntBASIC1.25□□□□□ -2.21
Ddx28Q9CWT6 Gm22477-201ENSMUST00000122569 316 ntBASIC1.25□□□□□ -2.21
Ddx28Q9CWT6 Gm24634-201ENSMUST00000158672 107 ntBASIC1.25□□□□□ -2.21
Ddx28Q9CWT6 Gm23267-201ENSMUST00000178490 132 ntBASIC1.25□□□□□ -2.21
Ddx28Q9CWT6 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC1.25□□□□□ -2.21
Ddx28Q9CWT6 AC154282.1-201ENSMUST00000223154 265 ntBASIC1.25□□□□□ -2.21
Ddx28Q9CWT6 AC168062.3-201ENSMUST00000227025 165 ntBASIC1.25□□□□□ -2.21
Ddx28Q9CWT6 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.24□□□□□ -2.21
Ddx28Q9CWT6 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
Ddx28Q9CWT6 Gm24171-201ENSMUST00000104126 131 ntBASIC1.24□□□□□ -2.21
Ddx28Q9CWT6 Gm12771-201ENSMUST00000120246 135 ntBASIC1.24□□□□□ -2.21
Ddx28Q9CWT6 Gm13246-201ENSMUST00000120994 315 ntBASIC1.24□□□□□ -2.21
Ddx28Q9CWT6 Gm26049-201ENSMUST00000157313 108 ntBASIC1.24□□□□□ -2.21
Ddx28Q9CWT6 Gm26415-201ENSMUST00000157673 292 ntBASIC1.24□□□□□ -2.21
Ddx28Q9CWT6 Gm24345-201ENSMUST00000158706 124 ntBASIC1.24□□□□□ -2.21
Ddx28Q9CWT6 Traj60-201ENSMUST00000167781 54 ntBASIC1.24□□□□□ -2.21
Ddx28Q9CWT6 Trav5d-3-201ENSMUST00000170041 270 ntBASIC1.24□□□□□ -2.21
Ddx28Q9CWT6 Gm37586-201ENSMUST00000193654 204 ntBASIC1.24□□□□□ -2.21
Ddx28Q9CWT6 Gm45544-201ENSMUST00000211130 88 ntBASIC1.24□□□□□ -2.21
Ddx28Q9CWT6 CT010449.1-201ENSMUST00000220624 153 ntBASIC1.24□□□□□ -2.21
Ddx28Q9CWT6 AC154328.1-201ENSMUST00000225875 307 ntBASIC1.24□□□□□ -2.21
Ddx28Q9CWT6 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC1.24□□□□□ -2.21
Ddx28Q9CWT6 Gm27047-201ENSMUST00000183072 1819 ntBASIC1.24□□□□□ -2.21
Ddx28Q9CWT6 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
Ddx28Q9CWT6 Gm43877-201ENSMUST00000205029 2238 ntBASIC1.23□□□□□ -2.21
Ddx28Q9CWT6 Gm22785-201ENSMUST00000104087 132 ntBASIC1.23□□□□□ -2.21
Ddx28Q9CWT6 Gm26293-201ENSMUST00000104170 84 ntBASIC1.23□□□□□ -2.21
Ddx28Q9CWT6 Gm11792-201ENSMUST00000120640 168 ntBASIC1.23□□□□□ -2.21
Ddx28Q9CWT6 Gm25323-201ENSMUST00000122555 103 ntBASIC1.23□□□□□ -2.21
Ddx28Q9CWT6 Gm24915-201ENSMUST00000157288 78 ntBASIC1.23□□□□□ -2.21
Ddx28Q9CWT6 Gm24000-201ENSMUST00000158063 89 ntBASIC1.23□□□□□ -2.21
Ddx28Q9CWT6 Gm27493-201ENSMUST00000184128 78 ntBASIC1.23□□□□□ -2.21
Ddx28Q9CWT6 Snord96a-201ENSMUST00000082791 81 ntBASIC1.23□□□□□ -2.21
Ddx28Q9CWT6 Gm22704-201ENSMUST00000083027 137 ntBASIC1.23□□□□□ -2.21
Ddx28Q9CWT6 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC1.23□□□□□ -2.21
Ddx28Q9CWT6 AC159625.1-201ENSMUST00000220994 2625 ntBASIC1.22□□□□□ -2.21
Ddx28Q9CWT6 n-R5s73-201ENSMUST00000122508 107 ntBASIC1.22□□□□□ -2.21
Ddx28Q9CWT6 Gm25828-201ENSMUST00000157087 95 ntBASIC1.22□□□□□ -2.21
Ddx28Q9CWT6 Gm20391-201ENSMUST00000174722 106 ntBASIC1.22□□□□□ -2.21
Ddx28Q9CWT6 Gm44464-201ENSMUST00000198010 138 ntBASIC1.22□□□□□ -2.21
Ddx28Q9CWT6 Mir218-1-201ENSMUST00000083669 110 ntBASIC1.22□□□□□ -2.21
Ddx28Q9CWT6 Gm25878-201ENSMUST00000104327 93 ntBASIC1.21□□□□□ -2.22
Ddx28Q9CWT6 Gm25495-201ENSMUST00000104431 131 ntBASIC1.21□□□□□ -2.22
Ddx28Q9CWT6 Gm24132-201ENSMUST00000104745 91 ntBASIC1.21□□□□□ -2.22
Ddx28Q9CWT6 Gm15069-201ENSMUST00000117792 192 ntBASIC1.21□□□□□ -2.22
Ddx28Q9CWT6 Gm15068-201ENSMUST00000119796 192 ntBASIC1.21□□□□□ -2.22
Ddx28Q9CWT6 Gm23106-201ENSMUST00000157554 101 ntBASIC1.21□□□□□ -2.22
Ddx28Q9CWT6 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC1.21□□□□□ -2.22
Ddx28Q9CWT6 Olfr1041-ps1-201ENSMUST00000215884 271 ntBASIC1.21□□□□□ -2.22
Ddx28Q9CWT6 Gm22283-201ENSMUST00000082556 161 ntBASIC1.21□□□□□ -2.22
Ddx28Q9CWT6 Snord82-201ENSMUST00000082889 70 ntBASIC1.21□□□□□ -2.22
Ddx28Q9CWT6 Gm8935-202ENSMUST00000105727 1959 ntBASIC1.2□□□□□ -2.22
Ddx28Q9CWT6 Gm12309-201ENSMUST00000119889 182 ntBASIC1.2□□□□□ -2.22
Ddx28Q9CWT6 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.2□□□□□ -2.22
Ddx28Q9CWT6 Gm22259-201ENSMUST00000178926 107 ntBASIC1.2□□□□□ -2.22
Ddx28Q9CWT6 Gm26073-201ENSMUST00000179906 127 ntBASIC1.2□□□□□ -2.22
Ddx28Q9CWT6 Gm28794-201ENSMUST00000185276 136 ntBASIC1.2□□□□□ -2.22
Ddx28Q9CWT6 Gm23299-201ENSMUST00000082708 79 ntBASIC1.2□□□□□ -2.22
Ddx28Q9CWT6 Mir654-201ENSMUST00000104787 84 ntBASIC1.19□□□□□ -2.22
Ddx28Q9CWT6 Gm24588-201ENSMUST00000116696 83 ntBASIC1.19□□□□□ -2.22
Ddx28Q9CWT6 Gm22195-201ENSMUST00000116861 108 ntBASIC1.19□□□□□ -2.22
Ddx28Q9CWT6 Gm23336-201ENSMUST00000117023 123 ntBASIC1.19□□□□□ -2.22
Ddx28Q9CWT6 Mir1904-201ENSMUST00000122702 80 ntBASIC1.19□□□□□ -2.22
Ddx28Q9CWT6 Gm22163-201ENSMUST00000158408 135 ntBASIC1.19□□□□□ -2.22
Ddx28Q9CWT6 Gm22944-201ENSMUST00000158662 133 ntBASIC1.19□□□□□ -2.22
Ddx28Q9CWT6 Gm23339-201ENSMUST00000158962 139 ntBASIC1.19□□□□□ -2.22
Ddx28Q9CWT6 Gm26160-201ENSMUST00000158965 63 ntBASIC1.19□□□□□ -2.22
Ddx28Q9CWT6 Gm16399-201ENSMUST00000181423 219 ntBASIC1.19□□□□□ -2.22
Ddx28Q9CWT6 Gm46993-201ENSMUST00000220708 259 ntBASIC1.19□□□□□ -2.22
Ddx28Q9CWT6 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
Ddx28Q9CWT6 Gm14671-201ENSMUST00000121790 262 ntBASIC1.18□□□□□ -2.22
Ddx28Q9CWT6 Gm25663-201ENSMUST00000157698 135 ntBASIC1.18□□□□□ -2.22
Ddx28Q9CWT6 Gm22387-201ENSMUST00000158191 131 ntBASIC1.18□□□□□ -2.22
Ddx28Q9CWT6 Gm23967-201ENSMUST00000175062 78 ntBASIC1.18□□□□□ -2.22
Ddx28Q9CWT6 Gm25949-201ENSMUST00000175333 114 ntBASIC1.18□□□□□ -2.22
Ddx28Q9CWT6 Gm25464-201ENSMUST00000175481 107 ntBASIC1.18□□□□□ -2.22
Ddx28Q9CWT6 Gm23907-201ENSMUST00000104595 189 ntBASIC1.17□□□□□ -2.22
Ddx28Q9CWT6 Gm24559-201ENSMUST00000157519 121 ntBASIC1.17□□□□□ -2.22
Ddx28Q9CWT6 Gm22663-201ENSMUST00000158721 102 ntBASIC1.17□□□□□ -2.22
Ddx28Q9CWT6 Gm27694-201ENSMUST00000184740 86 ntBASIC1.17□□□□□ -2.22
Ddx28Q9CWT6 Gm38364-201ENSMUST00000191814 179 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 171.5 ms