Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Gm44468-201ENSMUST00000199516 105 ntBASIC0.34□□□□□ -2.36
RTRAFQ9CQE8 Gm36189-201ENSMUST00000204113 523 ntBASIC0.34□□□□□ -2.36
RTRAFQ9CQE8 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC0.34□□□□□ -2.36
RTRAFQ9CQE8 Gm22571-201ENSMUST00000082984 70 ntBASIC0.34□□□□□ -2.36
RTRAFQ9CQE8 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.33□□□□□ -2.36
RTRAFQ9CQE8 Gm14884-201ENSMUST00000120456 196 ntBASIC0.33□□□□□ -2.36
RTRAFQ9CQE8 Gm22801-201ENSMUST00000175624 84 ntBASIC0.33□□□□□ -2.36
RTRAFQ9CQE8 Mir7227-201ENSMUST00000200408 59 ntBASIC0.33□□□□□ -2.36
RTRAFQ9CQE8 Gm44563-201ENSMUST00000207958 178 ntBASIC0.33□□□□□ -2.36
RTRAFQ9CQE8 AC165092.3-201ENSMUST00000223602 282 ntBASIC0.33□□□□□ -2.36
RTRAFQ9CQE8 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC0.32□□□□□ -2.36
RTRAFQ9CQE8 Gm25538-201ENSMUST00000101943 107 ntBASIC0.32□□□□□ -2.36
RTRAFQ9CQE8 Mir709-201ENSMUST00000102190 88 ntBASIC0.32□□□□□ -2.36
RTRAFQ9CQE8 Gm12797-201ENSMUST00000118645 273 ntBASIC0.32□□□□□ -2.36
RTRAFQ9CQE8 Gm24500-201ENSMUST00000158447 124 ntBASIC0.32□□□□□ -2.36
RTRAFQ9CQE8 Scarna3a-201ENSMUST00000158911 140 ntBASIC0.32□□□□□ -2.36
RTRAFQ9CQE8 Gm16307-201ENSMUST00000161269 210 ntBASIC0.32□□□□□ -2.36
RTRAFQ9CQE8 Mir6389-201ENSMUST00000183661 102 ntBASIC0.32□□□□□ -2.36
RTRAFQ9CQE8 Gm34015-201ENSMUST00000194908 451 ntBASIC0.32□□□□□ -2.36
RTRAFQ9CQE8 Gm44464-201ENSMUST00000198010 138 ntBASIC0.32□□□□□ -2.36
RTRAFQ9CQE8 Mir3087-201ENSMUST00000199405 56 ntBASIC0.32□□□□□ -2.36
RTRAFQ9CQE8 Gm44055-201ENSMUST00000204376 247 ntBASIC0.32□□□□□ -2.36
RTRAFQ9CQE8 Gm44211-201ENSMUST00000204867 145 ntBASIC0.32□□□□□ -2.36
RTRAFQ9CQE8 Mir101a-201ENSMUST00000083517 83 ntBASIC0.32□□□□□ -2.36
RTRAFQ9CQE8 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC0.31□□□□□ -2.36
RTRAFQ9CQE8 Gm12837-201ENSMUST00000120131 373 ntBASIC0.31□□□□□ -2.36
RTRAFQ9CQE8 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
RTRAFQ9CQE8 Gm24963-201ENSMUST00000157916 144 ntBASIC0.31□□□□□ -2.36
RTRAFQ9CQE8 Mir1933-201ENSMUST00000158930 88 ntBASIC0.31□□□□□ -2.36
RTRAFQ9CQE8 Gm24415-201ENSMUST00000180218 107 ntBASIC0.31□□□□□ -2.36
RTRAFQ9CQE8 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC0.31□□□□□ -2.36
RTRAFQ9CQE8 Gm44462-201ENSMUST00000199696 129 ntBASIC0.31□□□□□ -2.36
RTRAFQ9CQE8 Gm43911-201ENSMUST00000203097 76 ntBASIC0.31□□□□□ -2.36
RTRAFQ9CQE8 AC141438.3-201ENSMUST00000215632 202 ntBASIC0.31□□□□□ -2.36
RTRAFQ9CQE8 Gm46993-201ENSMUST00000220708 259 ntBASIC0.31□□□□□ -2.36
RTRAFQ9CQE8 Gm7240-201ENSMUST00000220769 664 ntBASIC0.31□□□□□ -2.36
RTRAFQ9CQE8 AC154282.1-201ENSMUST00000223154 265 ntBASIC0.31□□□□□ -2.36
RTRAFQ9CQE8 AC122769.2-201ENSMUST00000227248 302 ntBASIC0.31□□□□□ -2.36
RTRAFQ9CQE8 Gm26497-201ENSMUST00000083146 107 ntBASIC0.31□□□□□ -2.36
RTRAFQ9CQE8 AC160984.1-201ENSMUST00000225855 3154 ntBASIC0.31□□□□□ -2.36
RTRAFQ9CQE8 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC0.3□□□□□ -2.36
RTRAFQ9CQE8 Gm14946-201ENSMUST00000119859 296 ntBASIC0.3□□□□□ -2.36
RTRAFQ9CQE8 Gm25318-201ENSMUST00000122554 314 ntBASIC0.3□□□□□ -2.36
RTRAFQ9CQE8 Gm25393-201ENSMUST00000157336 285 ntBASIC0.3□□□□□ -2.36
RTRAFQ9CQE8 Gm25424-201ENSMUST00000157612 58 ntBASIC0.3□□□□□ -2.36
RTRAFQ9CQE8 Gm22706-201ENSMUST00000157907 112 ntBASIC0.3□□□□□ -2.36
RTRAFQ9CQE8 Gm23853-201ENSMUST00000158375 104 ntBASIC0.3□□□□□ -2.36
RTRAFQ9CQE8 Mir3968-201ENSMUST00000175355 100 ntBASIC0.3□□□□□ -2.36
RTRAFQ9CQE8 Gm25024-201ENSMUST00000179667 104 ntBASIC0.3□□□□□ -2.36
RTRAFQ9CQE8 Mir6377-201ENSMUST00000183760 114 ntBASIC0.3□□□□□ -2.36
RTRAFQ9CQE8 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC0.3□□□□□ -2.36
RTRAFQ9CQE8 Gm44977-201ENSMUST00000205283 420 ntBASIC0.3□□□□□ -2.36
RTRAFQ9CQE8 Gm23406-201ENSMUST00000082537 122 ntBASIC0.3□□□□□ -2.36
RTRAFQ9CQE8 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.29□□□□□ -2.36
RTRAFQ9CQE8 Gm22784-201ENSMUST00000104088 132 ntBASIC0.29□□□□□ -2.36
RTRAFQ9CQE8 Gm23214-201ENSMUST00000122716 157 ntBASIC0.29□□□□□ -2.36
RTRAFQ9CQE8 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC0.29□□□□□ -2.36
RTRAFQ9CQE8 Gm24392-201ENSMUST00000158136 103 ntBASIC0.29□□□□□ -2.36
RTRAFQ9CQE8 Gm24667-201ENSMUST00000158938 103 ntBASIC0.29□□□□□ -2.36
RTRAFQ9CQE8 Gm22242-201ENSMUST00000175224 118 ntBASIC0.29□□□□□ -2.36
RTRAFQ9CQE8 Gm23416-201ENSMUST00000175520 95 ntBASIC0.29□□□□□ -2.36
RTRAFQ9CQE8 Gm28008-201ENSMUST00000184021 186 ntBASIC0.29□□□□□ -2.36
RTRAFQ9CQE8 Gm45673-201ENSMUST00000210293 358 ntBASIC0.29□□□□□ -2.36
RTRAFQ9CQE8 Olfr1108-ps1-201ENSMUST00000216930 121 ntBASIC0.29□□□□□ -2.36
RTRAFQ9CQE8 Gm8219-201ENSMUST00000218309 242 ntBASIC0.29□□□□□ -2.36
RTRAFQ9CQE8 Gm25142-201ENSMUST00000082698 107 ntBASIC0.29□□□□□ -2.36
RTRAFQ9CQE8 Gm23377-201ENSMUST00000082943 126 ntBASIC0.29□□□□□ -2.36
RTRAFQ9CQE8 Gm44560-201ENSMUST00000207816 3115 ntBASIC0.28□□□□□ -2.36
RTRAFQ9CQE8 Gm13246-201ENSMUST00000120994 315 ntBASIC0.28□□□□□ -2.36
RTRAFQ9CQE8 Gm6985-201ENSMUST00000121255 271 ntBASIC0.28□□□□□ -2.36
RTRAFQ9CQE8 Gm26274-201ENSMUST00000157103 321 ntBASIC0.28□□□□□ -2.36
RTRAFQ9CQE8 Gm25882-201ENSMUST00000157784 85 ntBASIC0.28□□□□□ -2.36
RTRAFQ9CQE8 Gm22387-201ENSMUST00000158191 131 ntBASIC0.28□□□□□ -2.36
RTRAFQ9CQE8 Gm26287-201ENSMUST00000158887 81 ntBASIC0.28□□□□□ -2.36
RTRAFQ9CQE8 Gm27521-201ENSMUST00000184022 64 ntBASIC0.28□□□□□ -2.36
RTRAFQ9CQE8 Gm28579-201ENSMUST00000186143 369 ntBASIC0.28□□□□□ -2.36
RTRAFQ9CQE8 Gm26326-201ENSMUST00000083070 129 ntBASIC0.28□□□□□ -2.36
RTRAFQ9CQE8 Gm24765-201ENSMUST00000083691 103 ntBASIC0.28□□□□□ -2.36
RTRAFQ9CQE8 Gm22759-201ENSMUST00000102276 96 ntBASIC0.27□□□□□ -2.37
RTRAFQ9CQE8 Gm25110-201ENSMUST00000116684 121 ntBASIC0.27□□□□□ -2.37
RTRAFQ9CQE8 Gm25775-201ENSMUST00000116716 121 ntBASIC0.27□□□□□ -2.37
RTRAFQ9CQE8 Gm24795-201ENSMUST00000116737 121 ntBASIC0.27□□□□□ -2.37
RTRAFQ9CQE8 Gm25171-201ENSMUST00000116926 121 ntBASIC0.27□□□□□ -2.37
RTRAFQ9CQE8 Gm6272-201ENSMUST00000121256 171 ntBASIC0.27□□□□□ -2.37
RTRAFQ9CQE8 Gm25828-201ENSMUST00000157087 95 ntBASIC0.27□□□□□ -2.37
RTRAFQ9CQE8 Gm24476-201ENSMUST00000157437 131 ntBASIC0.27□□□□□ -2.37
RTRAFQ9CQE8 Gm24559-201ENSMUST00000157519 121 ntBASIC0.27□□□□□ -2.37
RTRAFQ9CQE8 Gm24323-201ENSMUST00000175342 77 ntBASIC0.27□□□□□ -2.37
RTRAFQ9CQE8 Gm23375-201ENSMUST00000175407 83 ntBASIC0.27□□□□□ -2.37
RTRAFQ9CQE8 Gm37845-201ENSMUST00000194977 355 ntBASIC0.27□□□□□ -2.37
RTRAFQ9CQE8 AC147101.2-201ENSMUST00000219756 184 ntBASIC0.27□□□□□ -2.37
RTRAFQ9CQE8 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.26□□□□□ -2.37
RTRAFQ9CQE8 Gm15069-201ENSMUST00000117792 192 ntBASIC0.26□□□□□ -2.37
RTRAFQ9CQE8 Gm15068-201ENSMUST00000119796 192 ntBASIC0.26□□□□□ -2.37
RTRAFQ9CQE8 Gm26152-201ENSMUST00000157427 101 ntBASIC0.26□□□□□ -2.37
RTRAFQ9CQE8 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC0.26□□□□□ -2.37
RTRAFQ9CQE8 AC125374.2-201ENSMUST00000214278 162 ntBASIC0.26□□□□□ -2.37
RTRAFQ9CQE8 Snord69-201ENSMUST00000104024 80 ntBASIC0.25□□□□□ -2.37
RTRAFQ9CQE8 Gm24171-201ENSMUST00000104126 131 ntBASIC0.25□□□□□ -2.37
RTRAFQ9CQE8 Gm26293-201ENSMUST00000104170 84 ntBASIC0.25□□□□□ -2.37
Retrieved 100 of 76,532 protein–RNA pairs in 225.6 ms