Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Gm25878-201ENSMUST00000104327 93 ntBASIC1.91□□□□□ -2.1
Pcdha9Q91Y11 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC1.91□□□□□ -2.1
Pcdha9Q91Y11 Gm22790-201ENSMUST00000157229 129 ntBASIC1.91□□□□□ -2.1
Pcdha9Q91Y11 Gm22228-201ENSMUST00000157364 101 ntBASIC1.91□□□□□ -2.1
Pcdha9Q91Y11 Gm26415-201ENSMUST00000157673 292 ntBASIC1.91□□□□□ -2.1
Pcdha9Q91Y11 Gm24770-201ENSMUST00000158505 92 ntBASIC1.91□□□□□ -2.1
Pcdha9Q91Y11 Gm23337-201ENSMUST00000158959 118 ntBASIC1.91□□□□□ -2.1
Pcdha9Q91Y11 Mir7014-201ENSMUST00000183853 63 ntBASIC1.91□□□□□ -2.1
Pcdha9Q91Y11 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC1.91□□□□□ -2.1
Pcdha9Q91Y11 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC1.91□□□□□ -2.1
Pcdha9Q91Y11 Gm25409-201ENSMUST00000083764 131 ntBASIC1.91□□□□□ -2.1
Pcdha9Q91Y11 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.91□□□□□ -2.1
Pcdha9Q91Y11 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
Pcdha9Q91Y11 Mir758-201ENSMUST00000103260 81 ntBASIC1.9□□□□□ -2.11
Pcdha9Q91Y11 Gm23950-201ENSMUST00000104026 129 ntBASIC1.9□□□□□ -2.11
Pcdha9Q91Y11 Gm23653-201ENSMUST00000116751 97 ntBASIC1.9□□□□□ -2.11
Pcdha9Q91Y11 Gm14671-201ENSMUST00000121790 262 ntBASIC1.9□□□□□ -2.11
Pcdha9Q91Y11 n-R5s73-201ENSMUST00000122508 107 ntBASIC1.9□□□□□ -2.11
Pcdha9Q91Y11 Gm15281-201ENSMUST00000125181 351 ntBASIC1.9□□□□□ -2.11
Pcdha9Q91Y11 Gm22803-201ENSMUST00000158049 283 ntBASIC1.9□□□□□ -2.11
Pcdha9Q91Y11 Mir669n-201ENSMUST00000158636 54 ntBASIC1.9□□□□□ -2.11
Pcdha9Q91Y11 Gm44859-201ENSMUST00000207831 94 ntBASIC1.9□□□□□ -2.11
Pcdha9Q91Y11 AC153646.2-201ENSMUST00000220516 109 ntBASIC1.9□□□□□ -2.11
Pcdha9Q91Y11 AC154328.1-201ENSMUST00000225875 307 ntBASIC1.9□□□□□ -2.11
Pcdha9Q91Y11 Mir201-201ENSMUST00000083470 66 ntBASIC1.9□□□□□ -2.11
Pcdha9Q91Y11 Gm23947-201ENSMUST00000093636 107 ntBASIC1.9□□□□□ -2.11
Pcdha9Q91Y11 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC1.9□□□□□ -2.11
Pcdha9Q91Y11 Gm43473-201ENSMUST00000200442 5997 ntBASIC1.9□□□□□ -2.11
Pcdha9Q91Y11 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
Pcdha9Q91Y11 Gm24572-201ENSMUST00000175505 88 ntBASIC1.89□□□□□ -2.11
Pcdha9Q91Y11 Gm26864-201ENSMUST00000181346 156 ntBASIC1.89□□□□□ -2.11
Pcdha9Q91Y11 Mir6995-201ENSMUST00000183658 71 ntBASIC1.89□□□□□ -2.11
Pcdha9Q91Y11 Gm43512-201ENSMUST00000198495 176 ntBASIC1.89□□□□□ -2.11
Pcdha9Q91Y11 Gm25855-201ENSMUST00000082787 72 ntBASIC1.89□□□□□ -2.11
Pcdha9Q91Y11 Gm25915-201ENSMUST00000104265 126 ntBASIC1.88□□□□□ -2.11
Pcdha9Q91Y11 Gm25980-201ENSMUST00000157176 218 ntBASIC1.88□□□□□ -2.11
Pcdha9Q91Y11 Gm22888-201ENSMUST00000158640 77 ntBASIC1.88□□□□□ -2.11
Pcdha9Q91Y11 Gm24345-201ENSMUST00000158706 124 ntBASIC1.88□□□□□ -2.11
Pcdha9Q91Y11 Gm27934-201ENSMUST00000158795 63 ntBASIC1.88□□□□□ -2.11
Pcdha9Q91Y11 Gm23567-201ENSMUST00000178005 107 ntBASIC1.88□□□□□ -2.11
Pcdha9Q91Y11 Gm25730-201ENSMUST00000178753 165 ntBASIC1.88□□□□□ -2.11
Pcdha9Q91Y11 Mir6406-201ENSMUST00000183592 120 ntBASIC1.88□□□□□ -2.11
Pcdha9Q91Y11 Gm42855-201ENSMUST00000197388 253 ntBASIC1.88□□□□□ -2.11
Pcdha9Q91Y11 Gm8219-201ENSMUST00000218309 242 ntBASIC1.88□□□□□ -2.11
Pcdha9Q91Y11 Gm25588-201ENSMUST00000082501 140 ntBASIC1.88□□□□□ -2.11
Pcdha9Q91Y11 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC1.88□□□□□ -2.11
Pcdha9Q91Y11 Gm24232-201ENSMUST00000104314 132 ntBASIC1.87□□□□□ -2.11
Pcdha9Q91Y11 Mir3096-201ENSMUST00000116685 71 ntBASIC1.87□□□□□ -2.11
Pcdha9Q91Y11 Mir3471-1-201ENSMUST00000175139 131 ntBASIC1.87□□□□□ -2.11
Pcdha9Q91Y11 Gm44976-201ENSMUST00000205543 261 ntBASIC1.87□□□□□ -2.11
Pcdha9Q91Y11 Gm45544-201ENSMUST00000211130 88 ntBASIC1.87□□□□□ -2.11
Pcdha9Q91Y11 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Pcdha9Q91Y11 Gm22283-201ENSMUST00000082556 161 ntBASIC1.87□□□□□ -2.11
Pcdha9Q91Y11 Gm11856-201ENSMUST00000118712 276 ntBASIC1.86□□□□□ -2.11
Pcdha9Q91Y11 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC1.86□□□□□ -2.11
Pcdha9Q91Y11 Gm24783-201ENSMUST00000157639 100 ntBASIC1.86□□□□□ -2.11
Pcdha9Q91Y11 Gm23181-201ENSMUST00000158685 110 ntBASIC1.86□□□□□ -2.11
Pcdha9Q91Y11 Gm26073-201ENSMUST00000179906 127 ntBASIC1.86□□□□□ -2.11
Pcdha9Q91Y11 Mir7679-201ENSMUST00000183379 63 ntBASIC1.86□□□□□ -2.11
Pcdha9Q91Y11 Gm44470-201ENSMUST00000203913 142 ntBASIC1.86□□□□□ -2.11
Pcdha9Q91Y11 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC1.86□□□□□ -2.11
Pcdha9Q91Y11 mt-Ta-201ENSMUST00000082398 69 ntBASIC1.86□□□□□ -2.11
Pcdha9Q91Y11 Gm24805-201ENSMUST00000082931 104 ntBASIC1.86□□□□□ -2.11
Pcdha9Q91Y11 Snord61-201ENSMUST00000083176 71 ntBASIC1.86□□□□□ -2.11
Pcdha9Q91Y11 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Pcdha9Q91Y11 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.85□□□□□ -2.11
Pcdha9Q91Y11 Gm22750-201ENSMUST00000102076 103 ntBASIC1.85□□□□□ -2.11
Pcdha9Q91Y11 Mir669b-201ENSMUST00000102172 97 ntBASIC1.85□□□□□ -2.11
Pcdha9Q91Y11 Gm24984-201ENSMUST00000104454 133 ntBASIC1.85□□□□□ -2.11
Pcdha9Q91Y11 Gm24000-201ENSMUST00000158063 89 ntBASIC1.85□□□□□ -2.11
Pcdha9Q91Y11 Gm22387-201ENSMUST00000158191 131 ntBASIC1.85□□□□□ -2.11
Pcdha9Q91Y11 Gm25771-201ENSMUST00000158565 144 ntBASIC1.85□□□□□ -2.11
Pcdha9Q91Y11 Gm25750-201ENSMUST00000175483 112 ntBASIC1.85□□□□□ -2.11
Pcdha9Q91Y11 Gm25820-202ENSMUST00000197479 128 ntBASIC1.85□□□□□ -2.11
Pcdha9Q91Y11 AC164561.1-201ENSMUST00000220414 115 ntBASIC1.85□□□□□ -2.11
Pcdha9Q91Y11 AL627387.1-201ENSMUST00000226063 250 ntBASIC1.85□□□□□ -2.11
Pcdha9Q91Y11 Gm26922-201ENSMUST00000082687 72 ntBASIC1.85□□□□□ -2.11
Pcdha9Q91Y11 Gm24151-201ENSMUST00000082758 141 ntBASIC1.85□□□□□ -2.11
Pcdha9Q91Y11 Gm10172-201ENSMUST00000085929 558 ntBASIC1.85□□□□□ -2.11
Pcdha9Q91Y11 Gm37602-201ENSMUST00000195187 3310 ntBASIC1.84□□□□□ -2.11
Pcdha9Q91Y11 Gm22105-201ENSMUST00000116734 116 ntBASIC1.84□□□□□ -2.11
Pcdha9Q91Y11 Gm15067-201ENSMUST00000119534 156 ntBASIC1.84□□□□□ -2.11
Pcdha9Q91Y11 Gm21885-201ENSMUST00000178891 327 ntBASIC1.84□□□□□ -2.11
Pcdha9Q91Y11 Gm29613-201ENSMUST00000185846 313 ntBASIC1.84□□□□□ -2.11
Pcdha9Q91Y11 Gm37545-201ENSMUST00000186512 148 ntBASIC1.84□□□□□ -2.11
Pcdha9Q91Y11 Gm29544-201ENSMUST00000188860 313 ntBASIC1.84□□□□□ -2.11
Pcdha9Q91Y11 Gm28808-201ENSMUST00000190978 313 ntBASIC1.84□□□□□ -2.11
Pcdha9Q91Y11 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC1.84□□□□□ -2.11
Pcdha9Q91Y11 Gm23722-201ENSMUST00000083002 130 ntBASIC1.84□□□□□ -2.11
Pcdha9Q91Y11 Gm23100-201ENSMUST00000083455 141 ntBASIC1.84□□□□□ -2.11
Pcdha9Q91Y11 Gm14709-201ENSMUST00000121225 304 ntBASIC1.83□□□□□ -2.12
Pcdha9Q91Y11 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
Pcdha9Q91Y11 U6.1-201ENSMUST00000157443 101 ntBASIC1.83□□□□□ -2.12
Pcdha9Q91Y11 Gm25425-201ENSMUST00000157611 96 ntBASIC1.83□□□□□ -2.12
Pcdha9Q91Y11 Gm27511-201ENSMUST00000183502 127 ntBASIC1.83□□□□□ -2.12
Pcdha9Q91Y11 Mir6352-201ENSMUST00000184495 116 ntBASIC1.83□□□□□ -2.12
Pcdha9Q91Y11 Mir3969-201ENSMUST00000197106 92 ntBASIC1.83□□□□□ -2.12
Pcdha9Q91Y11 Gm26326-201ENSMUST00000083070 129 ntBASIC1.83□□□□□ -2.12
Pcdha9Q91Y11 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Pcdha9Q91Y11 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 127.9 ms