Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Gm44320-201ENSMUST00000199276 86 ntBASIC1.62□□□□□ -2.15
H1fooQ8VIK3 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC1.62□□□□□ -2.15
H1fooQ8VIK3 Mir544-201ENSMUST00000103813 78 ntBASIC1.61□□□□□ -2.15
H1fooQ8VIK3 Gm11792-201ENSMUST00000120640 168 ntBASIC1.61□□□□□ -2.15
H1fooQ8VIK3 Gm22842-201ENSMUST00000157709 118 ntBASIC1.61□□□□□ -2.15
H1fooQ8VIK3 Gm25716-201ENSMUST00000158628 104 ntBASIC1.61□□□□□ -2.15
H1fooQ8VIK3 Gm24345-201ENSMUST00000158706 124 ntBASIC1.61□□□□□ -2.15
H1fooQ8VIK3 Gm27443-201ENSMUST00000184660 98 ntBASIC1.61□□□□□ -2.15
H1fooQ8VIK3 Gm42623-201ENSMUST00000197225 379 ntBASIC1.61□□□□□ -2.15
H1fooQ8VIK3 AC144671.1-201ENSMUST00000215265 99 ntBASIC1.61□□□□□ -2.15
H1fooQ8VIK3 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.61□□□□□ -2.15
H1fooQ8VIK3 CT030645.1-201ENSMUST00000224020 231 ntBASIC1.61□□□□□ -2.15
H1fooQ8VIK3 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.61□□□□□ -2.15
H1fooQ8VIK3 Mir222-201ENSMUST00000083537 79 ntBASIC1.61□□□□□ -2.15
H1fooQ8VIK3 Mir488-201ENSMUST00000093595 109 ntBASIC1.61□□□□□ -2.15
H1fooQ8VIK3 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC1.61□□□□□ -2.15
H1fooQ8VIK3 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
H1fooQ8VIK3 Mir1298-201ENSMUST00000116681 98 ntBASIC1.6□□□□□ -2.15
H1fooQ8VIK3 Gm6444-201ENSMUST00000119611 458 ntBASIC1.6□□□□□ -2.15
H1fooQ8VIK3 Gm15536-201ENSMUST00000121411 114 ntBASIC1.6□□□□□ -2.15
H1fooQ8VIK3 Gm24783-201ENSMUST00000157639 100 ntBASIC1.6□□□□□ -2.15
H1fooQ8VIK3 Gm26415-201ENSMUST00000157673 292 ntBASIC1.6□□□□□ -2.15
H1fooQ8VIK3 Gm23996-201ENSMUST00000158062 131 ntBASIC1.6□□□□□ -2.15
H1fooQ8VIK3 Gm22946-201ENSMUST00000158558 82 ntBASIC1.6□□□□□ -2.15
H1fooQ8VIK3 Gm22139-201ENSMUST00000158747 105 ntBASIC1.6□□□□□ -2.15
H1fooQ8VIK3 Gm26018-201ENSMUST00000104406 128 ntBASIC1.59□□□□□ -2.15
H1fooQ8VIK3 Mir669d-201ENSMUST00000104644 121 ntBASIC1.59□□□□□ -2.15
H1fooQ8VIK3 Gm16328-201ENSMUST00000126985 196 ntBASIC1.59□□□□□ -2.15
H1fooQ8VIK3 Gm22403-201ENSMUST00000174919 84 ntBASIC1.59□□□□□ -2.15
H1fooQ8VIK3 Mir3061-201ENSMUST00000175129 91 ntBASIC1.59□□□□□ -2.15
H1fooQ8VIK3 Gm42988-201ENSMUST00000198116 225 ntBASIC1.59□□□□□ -2.15
H1fooQ8VIK3 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC1.59□□□□□ -2.15
H1fooQ8VIK3 CT033781.2-201ENSMUST00000221113 153 ntBASIC1.59□□□□□ -2.15
H1fooQ8VIK3 Gm23299-201ENSMUST00000082708 79 ntBASIC1.59□□□□□ -2.15
H1fooQ8VIK3 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
H1fooQ8VIK3 Gm25090-201ENSMUST00000104000 132 ntBASIC1.58□□□□□ -2.16
H1fooQ8VIK3 Gm23772-201ENSMUST00000104433 102 ntBASIC1.58□□□□□ -2.16
H1fooQ8VIK3 Gm26049-201ENSMUST00000157313 108 ntBASIC1.58□□□□□ -2.16
H1fooQ8VIK3 Gm24262-201ENSMUST00000157431 144 ntBASIC1.58□□□□□ -2.16
H1fooQ8VIK3 Gm26038-201ENSMUST00000158151 106 ntBASIC1.58□□□□□ -2.16
H1fooQ8VIK3 Gm22612-201ENSMUST00000158293 101 ntBASIC1.58□□□□□ -2.16
H1fooQ8VIK3 Gm20391-201ENSMUST00000174722 106 ntBASIC1.58□□□□□ -2.16
H1fooQ8VIK3 Gm26073-201ENSMUST00000179906 127 ntBASIC1.58□□□□□ -2.16
H1fooQ8VIK3 Gm25936-201ENSMUST00000179952 114 ntBASIC1.58□□□□□ -2.16
H1fooQ8VIK3 Mir6995-201ENSMUST00000183658 71 ntBASIC1.58□□□□□ -2.16
H1fooQ8VIK3 Mir7226-201ENSMUST00000184953 60 ntBASIC1.58□□□□□ -2.16
H1fooQ8VIK3 Gm45471-201ENSMUST00000211270 281 ntBASIC1.58□□□□□ -2.16
H1fooQ8VIK3 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
H1fooQ8VIK3 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
H1fooQ8VIK3 Gm26077-201ENSMUST00000104064 123 ntBASIC1.57□□□□□ -2.16
H1fooQ8VIK3 Gm24984-201ENSMUST00000104454 133 ntBASIC1.57□□□□□ -2.16
H1fooQ8VIK3 Mir873a-201ENSMUST00000104863 77 ntBASIC1.57□□□□□ -2.16
H1fooQ8VIK3 Gm13345-201ENSMUST00000121928 228 ntBASIC1.57□□□□□ -2.16
H1fooQ8VIK3 Gm25771-201ENSMUST00000158565 144 ntBASIC1.57□□□□□ -2.16
H1fooQ8VIK3 Gm23567-201ENSMUST00000178005 107 ntBASIC1.57□□□□□ -2.16
H1fooQ8VIK3 Mir7039-201ENSMUST00000183852 85 ntBASIC1.57□□□□□ -2.16
H1fooQ8VIK3 Mir7675-201ENSMUST00000184262 58 ntBASIC1.57□□□□□ -2.16
H1fooQ8VIK3 Mir8090-201ENSMUST00000185078 136 ntBASIC1.57□□□□□ -2.16
H1fooQ8VIK3 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC1.57□□□□□ -2.16
H1fooQ8VIK3 Gm18213-201ENSMUST00000207850 178 ntBASIC1.57□□□□□ -2.16
H1fooQ8VIK3 AC150901.1-201ENSMUST00000208407 145 ntBASIC1.57□□□□□ -2.16
H1fooQ8VIK3 AC153646.2-201ENSMUST00000220516 109 ntBASIC1.57□□□□□ -2.16
H1fooQ8VIK3 Snora20-201ENSMUST00000082703 128 ntBASIC1.57□□□□□ -2.16
H1fooQ8VIK3 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
H1fooQ8VIK3 Gm23080-201ENSMUST00000157846 103 ntBASIC1.56□□□□□ -2.16
H1fooQ8VIK3 Gm27544-201ENSMUST00000185069 155 ntBASIC1.56□□□□□ -2.16
H1fooQ8VIK3 Gm43749-201ENSMUST00000199345 352 ntBASIC1.56□□□□□ -2.16
H1fooQ8VIK3 Gm8219-201ENSMUST00000218309 242 ntBASIC1.56□□□□□ -2.16
H1fooQ8VIK3 Gm25541-201ENSMUST00000116888 126 ntBASIC1.55□□□□□ -2.16
H1fooQ8VIK3 Gm14709-201ENSMUST00000121225 304 ntBASIC1.55□□□□□ -2.16
H1fooQ8VIK3 Gm13433-201ENSMUST00000121701 240 ntBASIC1.55□□□□□ -2.16
H1fooQ8VIK3 Gm24478-201ENSMUST00000157439 158 ntBASIC1.55□□□□□ -2.16
H1fooQ8VIK3 Gm23277-201ENSMUST00000157914 136 ntBASIC1.55□□□□□ -2.16
H1fooQ8VIK3 Gm25364-201ENSMUST00000158851 107 ntBASIC1.55□□□□□ -2.16
H1fooQ8VIK3 Snord1a-201ENSMUST00000083160 74 ntBASIC1.55□□□□□ -2.16
H1fooQ8VIK3 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
H1fooQ8VIK3 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
H1fooQ8VIK3 Gm23951-201ENSMUST00000104029 132 ntBASIC1.54□□□□□ -2.16
H1fooQ8VIK3 Mir1966-201ENSMUST00000158807 108 ntBASIC1.54□□□□□ -2.16
H1fooQ8VIK3 Gm22802-201ENSMUST00000175621 89 ntBASIC1.54□□□□□ -2.16
H1fooQ8VIK3 Mir6901-201ENSMUST00000185062 62 ntBASIC1.54□□□□□ -2.16
H1fooQ8VIK3 Gm25820-202ENSMUST00000197479 128 ntBASIC1.54□□□□□ -2.16
H1fooQ8VIK3 Mir653-201ENSMUST00000102402 85 ntBASIC1.53□□□□□ -2.16
H1fooQ8VIK3 BC022960-201ENSMUST00000119987 1815 ntBASIC1.53□□□□□ -2.16
H1fooQ8VIK3 Gm22929-201ENSMUST00000175517 107 ntBASIC1.53□□□□□ -2.16
H1fooQ8VIK3 Gm22264-201ENSMUST00000178200 107 ntBASIC1.53□□□□□ -2.16
H1fooQ8VIK3 AC151902.2-201ENSMUST00000226419 301 ntBASIC1.53□□□□□ -2.16
H1fooQ8VIK3 Gm25588-201ENSMUST00000082501 140 ntBASIC1.53□□□□□ -2.16
H1fooQ8VIK3 Gm24165-201ENSMUST00000082718 128 ntBASIC1.53□□□□□ -2.16
H1fooQ8VIK3 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.53□□□□□ -2.16
H1fooQ8VIK3 Gm44560-201ENSMUST00000207816 3115 ntBASIC1.52□□□□□ -2.17
H1fooQ8VIK3 Gm23578-201ENSMUST00000103943 104 ntBASIC1.52□□□□□ -2.17
H1fooQ8VIK3 Gm23320-201ENSMUST00000104462 127 ntBASIC1.52□□□□□ -2.17
H1fooQ8VIK3 Gm22373-201ENSMUST00000104584 89 ntBASIC1.52□□□□□ -2.17
H1fooQ8VIK3 Gm22099-201ENSMUST00000157925 123 ntBASIC1.52□□□□□ -2.17
H1fooQ8VIK3 Gm24054-201ENSMUST00000158619 105 ntBASIC1.52□□□□□ -2.17
H1fooQ8VIK3 Gm17528-201ENSMUST00000171026 239 ntBASIC1.52□□□□□ -2.17
H1fooQ8VIK3 Gm17020-201ENSMUST00000172274 274 ntBASIC1.52□□□□□ -2.17
H1fooQ8VIK3 Gm23419-201ENSMUST00000175523 84 ntBASIC1.52□□□□□ -2.17
H1fooQ8VIK3 Gm43512-201ENSMUST00000198495 176 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms