Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Gm23654-201ENSMUST00000116758 126 ntBASIC2.68□□□□□ -1.98
Rpa1Q8VEE4 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC2.68□□□□□ -1.98
Rpa1Q8VEE4 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
Rpa1Q8VEE4 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
Rpa1Q8VEE4 Snora20-201ENSMUST00000082703 128 ntBASIC2.68□□□□□ -1.98
Rpa1Q8VEE4 Gm22866-201ENSMUST00000083947 177 ntBASIC2.68□□□□□ -1.98
Rpa1Q8VEE4 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
Rpa1Q8VEE4 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
Rpa1Q8VEE4 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
Rpa1Q8VEE4 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.67□□□□□ -1.98
Rpa1Q8VEE4 Gm22023-201ENSMUST00000104354 130 ntBASIC2.67□□□□□ -1.98
Rpa1Q8VEE4 Gm22674-201ENSMUST00000104413 131 ntBASIC2.67□□□□□ -1.98
Rpa1Q8VEE4 Gm26345-201ENSMUST00000157534 120 ntBASIC2.67□□□□□ -1.98
Rpa1Q8VEE4 Gm25978-201ENSMUST00000158698 90 ntBASIC2.67□□□□□ -1.98
Rpa1Q8VEE4 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC2.67□□□□□ -1.98
Rpa1Q8VEE4 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC2.67□□□□□ -1.98
Rpa1Q8VEE4 Gm25855-201ENSMUST00000082787 72 ntBASIC2.67□□□□□ -1.98
Rpa1Q8VEE4 Mir151-201ENSMUST00000083678 68 ntBASIC2.67□□□□□ -1.98
Rpa1Q8VEE4 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
Rpa1Q8VEE4 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
Rpa1Q8VEE4 Gm26473-201ENSMUST00000116763 127 ntBASIC2.66□□□□□ -1.98
Rpa1Q8VEE4 Gm22196-201ENSMUST00000116865 109 ntBASIC2.66□□□□□ -1.98
Rpa1Q8VEE4 Gm11792-201ENSMUST00000120640 168 ntBASIC2.66□□□□□ -1.98
Rpa1Q8VEE4 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC2.66□□□□□ -1.98
Rpa1Q8VEE4 Gm20409-201ENSMUST00000173457 130 ntBASIC2.66□□□□□ -1.98
Rpa1Q8VEE4 Gm26498-201ENSMUST00000177799 79 ntBASIC2.66□□□□□ -1.98
Rpa1Q8VEE4 Gm26230-201ENSMUST00000180141 79 ntBASIC2.66□□□□□ -1.98
Rpa1Q8VEE4 Gm43324-201ENSMUST00000197482 289 ntBASIC2.66□□□□□ -1.98
Rpa1Q8VEE4 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.66□□□□□ -1.98
Rpa1Q8VEE4 Mir93-201ENSMUST00000083593 88 ntBASIC2.66□□□□□ -1.98
Rpa1Q8VEE4 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
Rpa1Q8VEE4 Gm24982-201ENSMUST00000104456 132 ntBASIC2.65□□□□□ -1.99
Rpa1Q8VEE4 Gm23996-201ENSMUST00000158062 131 ntBASIC2.65□□□□□ -1.99
Rpa1Q8VEE4 Mir7578-201ENSMUST00000183455 82 ntBASIC2.65□□□□□ -1.99
Rpa1Q8VEE4 AC136457.1-201ENSMUST00000224195 156 ntBASIC2.65□□□□□ -1.99
Rpa1Q8VEE4 Gm23615-201ENSMUST00000082602 65 ntBASIC2.65□□□□□ -1.99
Rpa1Q8VEE4 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
Rpa1Q8VEE4 Gm11856-201ENSMUST00000118712 276 ntBASIC2.64□□□□□ -1.99
Rpa1Q8VEE4 Fau-ps1-201ENSMUST00000119675 252 ntBASIC2.64□□□□□ -1.99
Rpa1Q8VEE4 Gm23980-201ENSMUST00000157135 158 ntBASIC2.64□□□□□ -1.99
Rpa1Q8VEE4 Gm26090-201ENSMUST00000157897 128 ntBASIC2.64□□□□□ -1.99
Rpa1Q8VEE4 Mir411-201ENSMUST00000083543 82 ntBASIC2.64□□□□□ -1.99
Rpa1Q8VEE4 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.64□□□□□ -1.99
Rpa1Q8VEE4 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
Rpa1Q8VEE4 Gm23911-201ENSMUST00000104596 134 ntBASIC2.63□□□□□ -1.99
Rpa1Q8VEE4 Mir1949-201ENSMUST00000157434 141 ntBASIC2.63□□□□□ -1.99
Rpa1Q8VEE4 Gm26411-201ENSMUST00000157668 107 ntBASIC2.63□□□□□ -1.99
Rpa1Q8VEE4 Gm22332-201ENSMUST00000158072 126 ntBASIC2.63□□□□□ -1.99
Rpa1Q8VEE4 Gm25490-201ENSMUST00000158734 130 ntBASIC2.63□□□□□ -1.99
Rpa1Q8VEE4 Gm25069-201ENSMUST00000175238 86 ntBASIC2.63□□□□□ -1.99
Rpa1Q8VEE4 Gm8034-201ENSMUST00000178853 132 ntBASIC2.63□□□□□ -1.99
Rpa1Q8VEE4 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
Rpa1Q8VEE4 Gm43626-201ENSMUST00000198575 162 ntBASIC2.63□□□□□ -1.99
Rpa1Q8VEE4 AC126691.1-201ENSMUST00000226534 202 ntBASIC2.63□□□□□ -1.99
Rpa1Q8VEE4 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
Rpa1Q8VEE4 Gm26076-201ENSMUST00000104065 105 ntBASIC2.62□□□□□ -1.99
Rpa1Q8VEE4 Gm12412-201ENSMUST00000121867 328 ntBASIC2.62□□□□□ -1.99
Rpa1Q8VEE4 DQ267100-201ENSMUST00000122600 72 ntBASIC2.62□□□□□ -1.99
Rpa1Q8VEE4 Gm25544-201ENSMUST00000122676 120 ntBASIC2.62□□□□□ -1.99
Rpa1Q8VEE4 Gm22322-201ENSMUST00000157151 111 ntBASIC2.62□□□□□ -1.99
Rpa1Q8VEE4 Gm24913-201ENSMUST00000157286 107 ntBASIC2.62□□□□□ -1.99
Rpa1Q8VEE4 Gm22141-201ENSMUST00000157403 277 ntBASIC2.62□□□□□ -1.99
Rpa1Q8VEE4 Gm24771-201ENSMUST00000158508 137 ntBASIC2.62□□□□□ -1.99
Rpa1Q8VEE4 Gm24877-201ENSMUST00000158779 116 ntBASIC2.62□□□□□ -1.99
Rpa1Q8VEE4 Mir7242-201ENSMUST00000183710 79 ntBASIC2.62□□□□□ -1.99
Rpa1Q8VEE4 Gm45429-201ENSMUST00000209527 172 ntBASIC2.62□□□□□ -1.99
Rpa1Q8VEE4 Gm18795-202ENSMUST00000223373 2920 ntBASIC2.62□□□□□ -1.99
Rpa1Q8VEE4 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
Rpa1Q8VEE4 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Rpa1Q8VEE4 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC2.61□□□□□ -1.99
Rpa1Q8VEE4 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.61□□□□□ -1.99
Rpa1Q8VEE4 Gm23600-201ENSMUST00000157260 71 ntBASIC2.61□□□□□ -1.99
Rpa1Q8VEE4 Gm25994-201ENSMUST00000175392 101 ntBASIC2.61□□□□□ -1.99
Rpa1Q8VEE4 Gm20718-201ENSMUST00000176058 259 ntBASIC2.61□□□□□ -1.99
Rpa1Q8VEE4 Mir7683-201ENSMUST00000183842 61 ntBASIC2.61□□□□□ -1.99
Rpa1Q8VEE4 AC126939.1-201ENSMUST00000224943 226 ntBASIC2.61□□□□□ -1.99
Rpa1Q8VEE4 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Rpa1Q8VEE4 Gm25377-201ENSMUST00000104334 129 ntBASIC2.6□□□□□ -1.99
Rpa1Q8VEE4 Gm25500-201ENSMUST00000104426 123 ntBASIC2.6□□□□□ -1.99
Rpa1Q8VEE4 Gm25945-201ENSMUST00000122484 135 ntBASIC2.6□□□□□ -1.99
Rpa1Q8VEE4 Gm23223-201ENSMUST00000158119 127 ntBASIC2.6□□□□□ -1.99
Rpa1Q8VEE4 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC2.6□□□□□ -1.99
Rpa1Q8VEE4 Igkv11-118-201ENSMUST00000199448 346 ntBASIC2.6□□□□□ -1.99
Rpa1Q8VEE4 AC144783.2-201ENSMUST00000219089 195 ntBASIC2.6□□□□□ -1.99
Rpa1Q8VEE4 Mir107-201ENSMUST00000083660 87 ntBASIC2.6□□□□□ -1.99
Rpa1Q8VEE4 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Rpa1Q8VEE4 CT009504.1-201ENSMUST00000218252 3330 ntBASIC2.59□□□□□ -1.99
Rpa1Q8VEE4 Gm26213-201ENSMUST00000158582 110 ntBASIC2.59□□□□□ -1.99
Rpa1Q8VEE4 Gm28282-201ENSMUST00000186072 186 ntBASIC2.59□□□□□ -1.99
Rpa1Q8VEE4 Gm43722-201ENSMUST00000196054 124 ntBASIC2.59□□□□□ -1.99
Rpa1Q8VEE4 Mir128-1-201ENSMUST00000083586 70 ntBASIC2.59□□□□□ -1.99
Rpa1Q8VEE4 Mir451a-201ENSMUST00000093557 72 ntBASIC2.59□□□□□ -1.99
Rpa1Q8VEE4 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
Rpa1Q8VEE4 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Rpa1Q8VEE4 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC2.58□□□□□ -2
Rpa1Q8VEE4 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC2.58□□□□□ -2
Rpa1Q8VEE4 Gm25113-201ENSMUST00000157185 143 ntBASIC2.58□□□□□ -2
Rpa1Q8VEE4 Gm26215-201ENSMUST00000158584 139 ntBASIC2.58□□□□□ -2
Rpa1Q8VEE4 Gm25750-201ENSMUST00000175483 112 ntBASIC2.58□□□□□ -2
Rpa1Q8VEE4 Gm30534-201ENSMUST00000217928 207 ntBASIC2.58□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms