Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Gm22003-201ENSMUST00000101885 107 ntBASIC2.58□□□□□ -2
Ubp1Q811S7 Gm25910-201ENSMUST00000157620 140 ntBASIC2.58□□□□□ -2
Ubp1Q811S7 Gm22756-201ENSMUST00000180118 107 ntBASIC2.58□□□□□ -2
Ubp1Q811S7 Gm27722-201ENSMUST00000183908 76 ntBASIC2.58□□□□□ -2
Ubp1Q811S7 Gm45452-201ENSMUST00000210905 177 ntBASIC2.58□□□□□ -2
Ubp1Q811S7 CT009696.1-201ENSMUST00000215745 256 ntBASIC2.58□□□□□ -2
Ubp1Q811S7 Gm26054-201ENSMUST00000083037 107 ntBASIC2.58□□□□□ -2
Ubp1Q811S7 Gm24492-201ENSMUST00000083798 107 ntBASIC2.58□□□□□ -2
Ubp1Q811S7 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC2.58□□□□□ -2
Ubp1Q811S7 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC2.58□□□□□ -2
Ubp1Q811S7 Gm11856-201ENSMUST00000118712 276 ntBASIC2.57□□□□□ -2
Ubp1Q811S7 Gm22451-201ENSMUST00000122803 151 ntBASIC2.57□□□□□ -2
Ubp1Q811S7 Gm26406-201ENSMUST00000158503 124 ntBASIC2.57□□□□□ -2
Ubp1Q811S7 Gm22858-201ENSMUST00000174972 76 ntBASIC2.57□□□□□ -2
Ubp1Q811S7 Mir6377-201ENSMUST00000183760 114 ntBASIC2.57□□□□□ -2
Ubp1Q811S7 Gm45268-201ENSMUST00000210046 370 ntBASIC2.57□□□□□ -2
Ubp1Q811S7 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC2.57□□□□□ -2
Ubp1Q811S7 Gm25855-201ENSMUST00000082787 72 ntBASIC2.57□□□□□ -2
Ubp1Q811S7 Gm25987-201ENSMUST00000083234 107 ntBASIC2.57□□□□□ -2
Ubp1Q811S7 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC2.57□□□□□ -2
Ubp1Q811S7 Gm22554-201ENSMUST00000157798 147 ntBASIC2.56□□□□□ -2
Ubp1Q811S7 Gm23996-201ENSMUST00000158062 131 ntBASIC2.56□□□□□ -2
Ubp1Q811S7 Gm25368-201ENSMUST00000158847 131 ntBASIC2.56□□□□□ -2
Ubp1Q811S7 Gm20718-201ENSMUST00000176058 259 ntBASIC2.56□□□□□ -2
Ubp1Q811S7 Gm25098-201ENSMUST00000177580 79 ntBASIC2.56□□□□□ -2
Ubp1Q811S7 Gm23356-201ENSMUST00000177610 79 ntBASIC2.56□□□□□ -2
Ubp1Q811S7 Gm24027-201ENSMUST00000177611 79 ntBASIC2.56□□□□□ -2
Ubp1Q811S7 Gm22511-201ENSMUST00000177628 79 ntBASIC2.56□□□□□ -2
Ubp1Q811S7 Gm22630-201ENSMUST00000177781 79 ntBASIC2.56□□□□□ -2
Ubp1Q811S7 Gm23560-201ENSMUST00000177782 79 ntBASIC2.56□□□□□ -2
Ubp1Q811S7 Gm25462-201ENSMUST00000177833 79 ntBASIC2.56□□□□□ -2
Ubp1Q811S7 Gm26059-201ENSMUST00000177865 79 ntBASIC2.56□□□□□ -2
Ubp1Q811S7 Gm22255-201ENSMUST00000177933 79 ntBASIC2.56□□□□□ -2
Ubp1Q811S7 Gm25146-201ENSMUST00000177976 79 ntBASIC2.56□□□□□ -2
Ubp1Q811S7 Gm25523-201ENSMUST00000178044 79 ntBASIC2.56□□□□□ -2
Ubp1Q811S7 Gm24585-201ENSMUST00000178104 79 ntBASIC2.56□□□□□ -2
Ubp1Q811S7 Gm22627-201ENSMUST00000178127 79 ntBASIC2.56□□□□□ -2
Ubp1Q811S7 Gm22912-201ENSMUST00000178242 79 ntBASIC2.56□□□□□ -2
Ubp1Q811S7 Gm24866-201ENSMUST00000178338 79 ntBASIC2.56□□□□□ -2
Ubp1Q811S7 Gm22524-201ENSMUST00000178357 79 ntBASIC2.56□□□□□ -2
Ubp1Q811S7 Gm25710-201ENSMUST00000178367 79 ntBASIC2.56□□□□□ -2
Ubp1Q811S7 Gm23575-201ENSMUST00000178406 79 ntBASIC2.56□□□□□ -2
Ubp1Q811S7 Gm24872-201ENSMUST00000178434 79 ntBASIC2.56□□□□□ -2
Ubp1Q811S7 Gm22449-201ENSMUST00000178924 79 ntBASIC2.56□□□□□ -2
Ubp1Q811S7 Gm24702-201ENSMUST00000178965 79 ntBASIC2.56□□□□□ -2
Ubp1Q811S7 Gm24206-201ENSMUST00000179011 79 ntBASIC2.56□□□□□ -2
Ubp1Q811S7 Gm24528-201ENSMUST00000179164 79 ntBASIC2.56□□□□□ -2
Ubp1Q811S7 Gm22909-201ENSMUST00000179190 79 ntBASIC2.56□□□□□ -2
Ubp1Q811S7 Gm26334-201ENSMUST00000179403 79 ntBASIC2.56□□□□□ -2
Ubp1Q811S7 Gm25463-201ENSMUST00000179405 79 ntBASIC2.56□□□□□ -2
Ubp1Q811S7 Gm25742-201ENSMUST00000179530 79 ntBASIC2.56□□□□□ -2
Ubp1Q811S7 Gm25209-201ENSMUST00000179576 79 ntBASIC2.56□□□□□ -2
Ubp1Q811S7 Gm26392-201ENSMUST00000179661 79 ntBASIC2.56□□□□□ -2
Ubp1Q811S7 Gm25230-201ENSMUST00000179740 79 ntBASIC2.56□□□□□ -2
Ubp1Q811S7 Gm26434-201ENSMUST00000179778 79 ntBASIC2.56□□□□□ -2
Ubp1Q811S7 Gm25741-201ENSMUST00000179825 79 ntBASIC2.56□□□□□ -2
Ubp1Q811S7 Gm24759-201ENSMUST00000179827 79 ntBASIC2.56□□□□□ -2
Ubp1Q811S7 Gm24219-201ENSMUST00000179861 79 ntBASIC2.56□□□□□ -2
Ubp1Q811S7 Mir6916-201ENSMUST00000184514 63 ntBASIC2.56□□□□□ -2
Ubp1Q811S7 Mir6419-201ENSMUST00000184784 113 ntBASIC2.56□□□□□ -2
Ubp1Q811S7 Gm19257-201ENSMUST00000186121 183 ntBASIC2.56□□□□□ -2
Ubp1Q811S7 Gm23254-201ENSMUST00000097244 79 ntBASIC2.56□□□□□ -2
Ubp1Q811S7 Gm45257-201ENSMUST00000210301 3998 ntBASIC2.55□□□□□ -2
Ubp1Q811S7 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC2.55□□□□□ -2
Ubp1Q811S7 Mir466k-201ENSMUST00000116774 122 ntBASIC2.55□□□□□ -2
Ubp1Q811S7 Gm25153-201ENSMUST00000157118 156 ntBASIC2.55□□□□□ -2
Ubp1Q811S7 Gm26411-201ENSMUST00000157668 107 ntBASIC2.55□□□□□ -2
Ubp1Q811S7 Gm24771-201ENSMUST00000158508 137 ntBASIC2.55□□□□□ -2
Ubp1Q811S7 Snord87-201ENSMUST00000175437 87 ntBASIC2.55□□□□□ -2
Ubp1Q811S7 Gm38706-201ENSMUST00000182397 2617 ntBASIC2.55□□□□□ -2
Ubp1Q811S7 Mir6928-201ENSMUST00000185166 70 ntBASIC2.55□□□□□ -2
Ubp1Q811S7 Gm24412-201ENSMUST00000083426 109 ntBASIC2.55□□□□□ -2
Ubp1Q811S7 Gm23095-201ENSMUST00000083446 107 ntBASIC2.55□□□□□ -2
Ubp1Q811S7 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC2.55□□□□□ -2
Ubp1Q811S7 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.55□□□□□ -2
Ubp1Q811S7 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.55□□□□□ -2
Ubp1Q811S7 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.55□□□□□ -2
Ubp1Q811S7 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
Ubp1Q811S7 Mir547-201ENSMUST00000102051 78 ntBASIC2.54□□□□□ -2
Ubp1Q811S7 Gm24234-201ENSMUST00000104316 107 ntBASIC2.54□□□□□ -2
Ubp1Q811S7 Gm23907-201ENSMUST00000104595 189 ntBASIC2.54□□□□□ -2
Ubp1Q811S7 Gm26345-201ENSMUST00000157534 120 ntBASIC2.54□□□□□ -2
Ubp1Q811S7 Gm22416-201ENSMUST00000158590 88 ntBASIC2.54□□□□□ -2
Ubp1Q811S7 Gm25119-201ENSMUST00000158815 88 ntBASIC2.54□□□□□ -2
Ubp1Q811S7 Gm37557-201ENSMUST00000191640 139 ntBASIC2.54□□□□□ -2
Ubp1Q811S7 Gm37807-201ENSMUST00000194310 190 ntBASIC2.54□□□□□ -2
Ubp1Q811S7 Gm22154-201ENSMUST00000083844 131 ntBASIC2.54□□□□□ -2
Ubp1Q811S7 Mir466-201ENSMUST00000093591 73 ntBASIC2.54□□□□□ -2
Ubp1Q811S7 Gm45178-201ENSMUST00000207744 4110 ntBASIC2.54□□□□□ -2
Ubp1Q811S7 BC022960-201ENSMUST00000119987 1815 ntBASIC2.54□□□□□ -2
Ubp1Q811S7 Gm25091-201ENSMUST00000103997 71 ntBASIC2.53□□□□□ -2
Ubp1Q811S7 Gm24122-201ENSMUST00000104107 132 ntBASIC2.53□□□□□ -2
Ubp1Q811S7 Gm26090-201ENSMUST00000157897 128 ntBASIC2.53□□□□□ -2
Ubp1Q811S7 Gm24769-201ENSMUST00000158506 129 ntBASIC2.53□□□□□ -2
Ubp1Q811S7 Gm25750-201ENSMUST00000175483 112 ntBASIC2.53□□□□□ -2
Ubp1Q811S7 Gm27532-201ENSMUST00000183726 113 ntBASIC2.53□□□□□ -2
Ubp1Q811S7 Gm37330-201ENSMUST00000192606 153 ntBASIC2.53□□□□□ -2
Ubp1Q811S7 Gm44966-201ENSMUST00000208096 157 ntBASIC2.53□□□□□ -2
Ubp1Q811S7 Gm16976-205ENSMUST00000227324 226 ntBASIC2.53□□□□□ -2
Ubp1Q811S7 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.53□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 167.7 ms