Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm23482-201ENSMUST00000104172 122 ntBASIC-0.59□□□□□ -2.5
Nup98Q6PFD9 Gm24887-201ENSMUST00000104386 108 ntBASIC-0.59□□□□□ -2.5
Nup98Q6PFD9 Gm23335-201ENSMUST00000117021 90 ntBASIC-0.59□□□□□ -2.5
Nup98Q6PFD9 Gm22838-201ENSMUST00000158437 99 ntBASIC-0.59□□□□□ -2.5
Nup98Q6PFD9 Gm24577-201ENSMUST00000158580 63 ntBASIC-0.59□□□□□ -2.5
Nup98Q6PFD9 Mir3473d-201ENSMUST00000175346 81 ntBASIC-0.59□□□□□ -2.5
Nup98Q6PFD9 Gm44923-201ENSMUST00000206673 85 ntBASIC-0.59□□□□□ -2.5
Nup98Q6PFD9 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC-0.59□□□□□ -2.5
Nup98Q6PFD9 Gm18242-201ENSMUST00000218455 542 ntBASIC-0.59□□□□□ -2.5
Nup98Q6PFD9 AC116460.1-201ENSMUST00000219040 313 ntBASIC-0.59□□□□□ -2.5
Nup98Q6PFD9 Gm23039-201ENSMUST00000083870 161 ntBASIC-0.59□□□□□ -2.5
Nup98Q6PFD9 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC-0.59□□□□□ -2.5
Nup98Q6PFD9 n-R5s39-201ENSMUST00000122613 108 ntBASIC-0.6□□□□□ -2.51
Nup98Q6PFD9 Mir1951-201ENSMUST00000157981 89 ntBASIC-0.6□□□□□ -2.51
Nup98Q6PFD9 Gm23411-201ENSMUST00000157988 62 ntBASIC-0.6□□□□□ -2.51
Nup98Q6PFD9 Gm25494-201ENSMUST00000158143 100 ntBASIC-0.6□□□□□ -2.51
Nup98Q6PFD9 Gm25486-201ENSMUST00000158726 63 ntBASIC-0.6□□□□□ -2.51
Nup98Q6PFD9 Gm28669-201ENSMUST00000188400 100 ntBASIC-0.6□□□□□ -2.51
Nup98Q6PFD9 Gm44352-201ENSMUST00000196358 110 ntBASIC-0.6□□□□□ -2.51
Nup98Q6PFD9 Gm19790-201ENSMUST00000214414 251 ntBASIC-0.6□□□□□ -2.51
Nup98Q6PFD9 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC-0.61□□□□□ -2.51
Nup98Q6PFD9 Gm27926-201ENSMUST00000157180 66 ntBASIC-0.61□□□□□ -2.51
Nup98Q6PFD9 Gm22814-201ENSMUST00000157452 104 ntBASIC-0.61□□□□□ -2.51
Nup98Q6PFD9 Gm23197-201ENSMUST00000158809 112 ntBASIC-0.61□□□□□ -2.51
Nup98Q6PFD9 Gm23812-201ENSMUST00000175156 84 ntBASIC-0.61□□□□□ -2.51
Nup98Q6PFD9 Gm23375-201ENSMUST00000175407 83 ntBASIC-0.61□□□□□ -2.51
Nup98Q6PFD9 Gm23374-201ENSMUST00000175408 84 ntBASIC-0.61□□□□□ -2.51
Nup98Q6PFD9 Gm28418-201ENSMUST00000186179 423 ntBASIC-0.61□□□□□ -2.51
Nup98Q6PFD9 Gm43487-201ENSMUST00000200331 1031 ntBASIC-0.61□□□□□ -2.51
Nup98Q6PFD9 Gm45543-201ENSMUST00000209327 88 ntBASIC-0.61□□□□□ -2.51
Nup98Q6PFD9 Gm35558-203ENSMUST00000222264 204 ntBASIC-0.61□□□□□ -2.51
Nup98Q6PFD9 Gm22248-201ENSMUST00000082482 150 ntBASIC-0.61□□□□□ -2.51
Nup98Q6PFD9 Mir377-201ENSMUST00000083504 68 ntBASIC-0.61□□□□□ -2.51
Nup98Q6PFD9 Gm26081-201ENSMUST00000104068 132 ntBASIC-0.61□□□□□ -2.51
Nup98Q6PFD9 Mir6350-201ENSMUST00000183639 105 ntBASIC-0.61□□□□□ -2.51
Nup98Q6PFD9 Mir1a-1-201ENSMUST00000093635 77 ntBASIC-0.61□□□□□ -2.51
Nup98Q6PFD9 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC-0.62□□□□□ -2.51
Nup98Q6PFD9 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC-0.62□□□□□ -2.51
Nup98Q6PFD9 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC-0.62□□□□□ -2.51
Nup98Q6PFD9 Snord98-201ENSMUST00000116819 65 ntBASIC-0.62□□□□□ -2.51
Nup98Q6PFD9 Gm12255-201ENSMUST00000117184 284 ntBASIC-0.62□□□□□ -2.51
Nup98Q6PFD9 Gm11386-201ENSMUST00000117761 347 ntBASIC-0.62□□□□□ -2.51
Nup98Q6PFD9 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC-0.62□□□□□ -2.51
Nup98Q6PFD9 Mir344h-1-201ENSMUST00000174922 60 ntBASIC-0.62□□□□□ -2.51
Nup98Q6PFD9 Mir344h-2-201ENSMUST00000175612 60 ntBASIC-0.62□□□□□ -2.51
Nup98Q6PFD9 Mir496b-201ENSMUST00000184935 113 ntBASIC-0.62□□□□□ -2.51
Nup98Q6PFD9 Gm28926-201ENSMUST00000191063 680 ntBASIC-0.62□□□□□ -2.51
Nup98Q6PFD9 Gm44375-201ENSMUST00000196657 150 ntBASIC-0.62□□□□□ -2.51
Nup98Q6PFD9 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC-0.62□□□□□ -2.51
Nup98Q6PFD9 Gm22421-201ENSMUST00000083058 107 ntBASIC-0.62□□□□□ -2.51
Nup98Q6PFD9 n-R5s12-201ENSMUST00000083785 119 ntBASIC-0.62□□□□□ -2.51
Nup98Q6PFD9 Gm10172-201ENSMUST00000085929 558 ntBASIC-0.62□□□□□ -2.51
Nup98Q6PFD9 Gm24116-201ENSMUST00000103975 107 ntBASIC-0.63□□□□□ -2.51
Nup98Q6PFD9 Gm22656-201ENSMUST00000104199 171 ntBASIC-0.63□□□□□ -2.51
Nup98Q6PFD9 Gm22543-201ENSMUST00000104347 94 ntBASIC-0.63□□□□□ -2.51
Nup98Q6PFD9 Gm22387-201ENSMUST00000158191 131 ntBASIC-0.63□□□□□ -2.51
Nup98Q6PFD9 Gm25249-201ENSMUST00000175471 78 ntBASIC-0.63□□□□□ -2.51
Nup98Q6PFD9 Gm43884-201ENSMUST00000204251 559 ntBASIC-0.63□□□□□ -2.51
Nup98Q6PFD9 Gm29817-201ENSMUST00000210098 172 ntBASIC-0.63□□□□□ -2.51
Nup98Q6PFD9 AC166358.10-201ENSMUST00000220556 144 ntBASIC-0.63□□□□□ -2.51
Nup98Q6PFD9 Gm25204-201ENSMUST00000082843 106 ntBASIC-0.63□□□□□ -2.51
Nup98Q6PFD9 Gm24595-201ENSMUST00000122501 110 ntBASIC-0.64□□□□□ -2.51
Nup98Q6PFD9 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC-0.64□□□□□ -2.51
Nup98Q6PFD9 Gm26090-201ENSMUST00000157897 128 ntBASIC-0.64□□□□□ -2.51
Nup98Q6PFD9 Gm36189-201ENSMUST00000204113 523 ntBASIC-0.64□□□□□ -2.51
Nup98Q6PFD9 AC159297.2-201ENSMUST00000219567 1075 ntBASIC-0.64□□□□□ -2.51
Nup98Q6PFD9 Gm22578-201ENSMUST00000083730 107 ntBASIC-0.64□□□□□ -2.51
Nup98Q6PFD9 Gm26415-201ENSMUST00000157673 292 ntBASIC-0.64□□□□□ -2.51
Nup98Q6PFD9 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC-0.64□□□□□ -2.51
Nup98Q6PFD9 Gm27993-201ENSMUST00000184362 85 ntBASIC-0.64□□□□□ -2.51
Nup98Q6PFD9 Gm24043-201ENSMUST00000083108 116 ntBASIC-0.64□□□□□ -2.51
Nup98Q6PFD9 Gm25652-201ENSMUST00000083780 103 ntBASIC-0.64□□□□□ -2.51
Nup98Q6PFD9 Gm25431-201ENSMUST00000101978 107 ntBASIC-0.65□□□□□ -2.51
Nup98Q6PFD9 Gm26384-201ENSMUST00000102183 110 ntBASIC-0.65□□□□□ -2.51
Nup98Q6PFD9 Mir465b-1-201ENSMUST00000103940 79 ntBASIC-0.65□□□□□ -2.51
Nup98Q6PFD9 Gm24283-201ENSMUST00000104233 107 ntBASIC-0.65□□□□□ -2.51
Nup98Q6PFD9 Mir465b-2-201ENSMUST00000104662 79 ntBASIC-0.65□□□□□ -2.51
Nup98Q6PFD9 Gm26022-201ENSMUST00000158663 108 ntBASIC-0.65□□□□□ -2.51
Nup98Q6PFD9 Gm24843-201ENSMUST00000158682 76 ntBASIC-0.65□□□□□ -2.51
Nup98Q6PFD9 Gm24197-201ENSMUST00000175085 109 ntBASIC-0.65□□□□□ -2.51
Nup98Q6PFD9 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC-0.65□□□□□ -2.51
Nup98Q6PFD9 Gm5034-201ENSMUST00000199115 634 ntBASIC-0.65□□□□□ -2.51
Nup98Q6PFD9 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC-0.65□□□□□ -2.51
Nup98Q6PFD9 Gm22834-201ENSMUST00000102021 79 ntBASIC-0.66□□□□□ -2.51
Nup98Q6PFD9 Mir706-201ENSMUST00000102262 84 ntBASIC-0.66□□□□□ -2.51
Nup98Q6PFD9 Gm25991-201ENSMUST00000102439 99 ntBASIC-0.66□□□□□ -2.51
Nup98Q6PFD9 Gm23483-201ENSMUST00000104179 108 ntBASIC-0.66□□□□□ -2.51
Nup98Q6PFD9 Gm22586-201ENSMUST00000157507 122 ntBASIC-0.66□□□□□ -2.51
Nup98Q6PFD9 Gm23159-201ENSMUST00000175088 77 ntBASIC-0.66□□□□□ -2.51
Nup98Q6PFD9 Gm22631-201ENSMUST00000179656 94 ntBASIC-0.66□□□□□ -2.51
Nup98Q6PFD9 AC164629.1-201ENSMUST00000220250 1113 ntBASIC-0.66□□□□□ -2.51
Nup98Q6PFD9 Gm24707-201ENSMUST00000082812 107 ntBASIC-0.66□□□□□ -2.51
Nup98Q6PFD9 Gm22591-201ENSMUST00000104243 106 ntBASIC-0.66□□□□□ -2.52
Nup98Q6PFD9 Gm25847-201ENSMUST00000116793 96 ntBASIC-0.66□□□□□ -2.52
Nup98Q6PFD9 Gm24517-201ENSMUST00000122560 107 ntBASIC-0.66□□□□□ -2.52
Nup98Q6PFD9 Gm44909-201ENSMUST00000208756 165 ntBASIC-0.66□□□□□ -2.52
Nup98Q6PFD9 Gm23442-201ENSMUST00000082919 134 ntBASIC-0.66□□□□□ -2.52
Nup98Q6PFD9 Gm14671-201ENSMUST00000121790 262 ntBASIC-0.67□□□□□ -2.52
Nup98Q6PFD9 Gm24440-201ENSMUST00000157236 63 ntBASIC-0.67□□□□□ -2.52
Nup98Q6PFD9 Gm23065-201ENSMUST00000158236 130 ntBASIC-0.67□□□□□ -2.52
Retrieved 100 of 76,532 protein–RNA pairs in 138.1 ms