Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC3.32□□□□□ -1.88
Scaf1Q5U4C3 Gm16186-201ENSMUST00000120132 216 ntBASIC3.31□□□□□ -1.88
Scaf1Q5U4C3 Gm25113-201ENSMUST00000157185 143 ntBASIC3.31□□□□□ -1.88
Scaf1Q5U4C3 Gm22888-201ENSMUST00000158640 77 ntBASIC3.31□□□□□ -1.88
Scaf1Q5U4C3 Gm24082-201ENSMUST00000175175 83 ntBASIC3.31□□□□□ -1.88
Scaf1Q5U4C3 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC3.3□□□□□ -1.88
Scaf1Q5U4C3 n-R5s73-201ENSMUST00000122508 107 ntBASIC3.3□□□□□ -1.88
Scaf1Q5U4C3 Gm22999-201ENSMUST00000157082 88 ntBASIC3.3□□□□□ -1.88
Scaf1Q5U4C3 Gm24345-201ENSMUST00000158706 124 ntBASIC3.3□□□□□ -1.88
Scaf1Q5U4C3 Gm24656-201ENSMUST00000177548 132 ntBASIC3.3□□□□□ -1.88
Scaf1Q5U4C3 Hmga1b-202ENSMUST00000178955 120 ntBASIC3.3□□□□□ -1.88
Scaf1Q5U4C3 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Scaf1Q5U4C3 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC3.3□□□□□ -1.88
Scaf1Q5U4C3 Gm23509-201ENSMUST00000083080 160 ntBASIC3.3□□□□□ -1.88
Scaf1Q5U4C3 Mir107-201ENSMUST00000083660 87 ntBASIC3.3□□□□□ -1.88
Scaf1Q5U4C3 Gm25006-201ENSMUST00000083813 107 ntBASIC3.3□□□□□ -1.88
Scaf1Q5U4C3 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Scaf1Q5U4C3 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Scaf1Q5U4C3 Gm6185-201ENSMUST00000193379 3553 ntBASIC3.3□□□□□ -1.88
Scaf1Q5U4C3 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC3.29□□□□□ -1.88
Scaf1Q5U4C3 Gm3081-201ENSMUST00000193413 3025 ntBASIC3.29□□□□□ -1.88
Scaf1Q5U4C3 n-R5s188-201ENSMUST00000122646 105 ntBASIC3.29□□□□□ -1.88
Scaf1Q5U4C3 Gm23600-201ENSMUST00000157260 71 ntBASIC3.29□□□□□ -1.88
Scaf1Q5U4C3 Gm24246-201ENSMUST00000157315 132 ntBASIC3.29□□□□□ -1.88
Scaf1Q5U4C3 Gm26004-201ENSMUST00000158804 116 ntBASIC3.29□□□□□ -1.88
Scaf1Q5U4C3 Mir669j-201ENSMUST00000179023 121 ntBASIC3.29□□□□□ -1.88
Scaf1Q5U4C3 Gm27722-201ENSMUST00000183908 76 ntBASIC3.29□□□□□ -1.88
Scaf1Q5U4C3 Gm37557-201ENSMUST00000191640 139 ntBASIC3.29□□□□□ -1.88
Scaf1Q5U4C3 Mir7657-201ENSMUST00000196051 57 ntBASIC3.29□□□□□ -1.88
Scaf1Q5U4C3 Gm44481-201ENSMUST00000197288 84 ntBASIC3.29□□□□□ -1.88
Scaf1Q5U4C3 Gm44339-201ENSMUST00000200598 84 ntBASIC3.29□□□□□ -1.88
Scaf1Q5U4C3 Gm8508-201ENSMUST00000061226 363 ntBASIC3.29□□□□□ -1.88
Scaf1Q5U4C3 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Scaf1Q5U4C3 Gm44489-201ENSMUST00000104619 97 ntBASIC3.28□□□□□ -1.88
Scaf1Q5U4C3 Mir880-201ENSMUST00000104809 78 ntBASIC3.28□□□□□ -1.88
Scaf1Q5U4C3 Gm24771-201ENSMUST00000158508 137 ntBASIC3.28□□□□□ -1.88
Scaf1Q5U4C3 Gm25642-201ENSMUST00000175137 66 ntBASIC3.28□□□□□ -1.88
Scaf1Q5U4C3 Gm26326-201ENSMUST00000083070 129 ntBASIC3.28□□□□□ -1.88
Scaf1Q5U4C3 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
Scaf1Q5U4C3 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC3.27□□□□□ -1.89
Scaf1Q5U4C3 Gm22545-201ENSMUST00000104350 132 ntBASIC3.27□□□□□ -1.89
Scaf1Q5U4C3 Gm15289-201ENSMUST00000117793 244 ntBASIC3.27□□□□□ -1.89
Scaf1Q5U4C3 Fau-ps1-201ENSMUST00000119675 252 ntBASIC3.27□□□□□ -1.89
Scaf1Q5U4C3 Gm22666-201ENSMUST00000158717 164 ntBASIC3.27□□□□□ -1.89
Scaf1Q5U4C3 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC3.27□□□□□ -1.89
Scaf1Q5U4C3 Gm26864-201ENSMUST00000181346 156 ntBASIC3.27□□□□□ -1.89
Scaf1Q5U4C3 Mir7683-201ENSMUST00000183842 61 ntBASIC3.27□□□□□ -1.89
Scaf1Q5U4C3 Gm27369-201ENSMUST00000185182 71 ntBASIC3.27□□□□□ -1.89
Scaf1Q5U4C3 AC132384.11-201ENSMUST00000219676 178 ntBASIC3.27□□□□□ -1.89
Scaf1Q5U4C3 Gm22752-201ENSMUST00000102083 109 ntBASIC3.26□□□□□ -1.89
Scaf1Q5U4C3 Gm25094-201ENSMUST00000103992 131 ntBASIC3.26□□□□□ -1.89
Scaf1Q5U4C3 Gm16561-201ENSMUST00000163001 192 ntBASIC3.26□□□□□ -1.89
Scaf1Q5U4C3 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC3.26□□□□□ -1.89
Scaf1Q5U4C3 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
Scaf1Q5U4C3 n-R5s164-201ENSMUST00000122664 112 ntBASIC3.25□□□□□ -1.89
Scaf1Q5U4C3 Gm24210-201ENSMUST00000158263 133 ntBASIC3.25□□□□□ -1.89
Scaf1Q5U4C3 Gm25368-201ENSMUST00000158847 131 ntBASIC3.25□□□□□ -1.89
Scaf1Q5U4C3 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC3.25□□□□□ -1.89
Scaf1Q5U4C3 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Scaf1Q5U4C3 Gm22079-201ENSMUST00000157592 106 ntBASIC3.24□□□□□ -1.89
Scaf1Q5U4C3 Snord87-201ENSMUST00000175437 87 ntBASIC3.24□□□□□ -1.89
Scaf1Q5U4C3 AC164612.2-202ENSMUST00000216314 253 ntBASIC3.24□□□□□ -1.89
Scaf1Q5U4C3 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Scaf1Q5U4C3 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
Scaf1Q5U4C3 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Scaf1Q5U4C3 Snord64-201ENSMUST00000104003 67 ntBASIC3.23□□□□□ -1.89
Scaf1Q5U4C3 Gm22517-201ENSMUST00000158265 136 ntBASIC3.23□□□□□ -1.89
Scaf1Q5U4C3 Gm23005-201ENSMUST00000158950 136 ntBASIC3.23□□□□□ -1.89
Scaf1Q5U4C3 Gm19257-201ENSMUST00000186121 183 ntBASIC3.23□□□□□ -1.89
Scaf1Q5U4C3 Snora20-201ENSMUST00000082703 128 ntBASIC3.23□□□□□ -1.89
Scaf1Q5U4C3 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
Scaf1Q5U4C3 Gm18795-202ENSMUST00000223373 2920 ntBASIC3.22□□□□□ -1.89
Scaf1Q5U4C3 Gm25623-201ENSMUST00000157216 108 ntBASIC3.22□□□□□ -1.89
Scaf1Q5U4C3 Mir6419-201ENSMUST00000184784 113 ntBASIC3.22□□□□□ -1.89
Scaf1Q5U4C3 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Scaf1Q5U4C3 Gm25089-201ENSMUST00000102015 79 ntBASIC3.21□□□□□ -1.9
Scaf1Q5U4C3 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC3.21□□□□□ -1.9
Scaf1Q5U4C3 Gm25840-201ENSMUST00000177821 79 ntBASIC3.21□□□□□ -1.9
Scaf1Q5U4C3 Gm24952-201ENSMUST00000177909 79 ntBASIC3.21□□□□□ -1.9
Scaf1Q5U4C3 Gm23682-201ENSMUST00000178146 79 ntBASIC3.21□□□□□ -1.9
Scaf1Q5U4C3 Gm24652-201ENSMUST00000178223 79 ntBASIC3.21□□□□□ -1.9
Scaf1Q5U4C3 Gm22629-201ENSMUST00000178272 79 ntBASIC3.21□□□□□ -1.9
Scaf1Q5U4C3 Gm24021-201ENSMUST00000178435 79 ntBASIC3.21□□□□□ -1.9
Scaf1Q5U4C3 Gm22274-201ENSMUST00000178441 79 ntBASIC3.21□□□□□ -1.9
Scaf1Q5U4C3 Gm22050-201ENSMUST00000178442 79 ntBASIC3.21□□□□□ -1.9
Scaf1Q5U4C3 Gm23688-201ENSMUST00000178502 79 ntBASIC3.21□□□□□ -1.9
Scaf1Q5U4C3 Gm23944-201ENSMUST00000178607 79 ntBASIC3.21□□□□□ -1.9
Scaf1Q5U4C3 Gm26283-201ENSMUST00000178625 79 ntBASIC3.21□□□□□ -1.9
Scaf1Q5U4C3 Gm25452-201ENSMUST00000178776 79 ntBASIC3.21□□□□□ -1.9
Scaf1Q5U4C3 Gm23286-201ENSMUST00000178963 79 ntBASIC3.21□□□□□ -1.9
Scaf1Q5U4C3 Gm22640-201ENSMUST00000179035 79 ntBASIC3.21□□□□□ -1.9
Scaf1Q5U4C3 Gm25984-201ENSMUST00000179129 79 ntBASIC3.21□□□□□ -1.9
Scaf1Q5U4C3 Gm25585-201ENSMUST00000179469 79 ntBASIC3.21□□□□□ -1.9
Scaf1Q5U4C3 Gm26374-201ENSMUST00000179737 79 ntBASIC3.21□□□□□ -1.9
Scaf1Q5U4C3 Gm24040-201ENSMUST00000179786 79 ntBASIC3.21□□□□□ -1.9
Scaf1Q5U4C3 Gm25017-201ENSMUST00000179805 79 ntBASIC3.21□□□□□ -1.9
Scaf1Q5U4C3 Gm23618-201ENSMUST00000179912 79 ntBASIC3.21□□□□□ -1.9
Scaf1Q5U4C3 Gm26284-201ENSMUST00000180107 79 ntBASIC3.21□□□□□ -1.9
Scaf1Q5U4C3 Gm24570-201ENSMUST00000180314 79 ntBASIC3.21□□□□□ -1.9
Scaf1Q5U4C3 Gm24654-201ENSMUST00000180315 79 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 147.5 ms