Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 Mir466p-201ENSMUST00000103925 89 ntBASIC1.26□□□□□ -2.21
Trim58Q5NCC9 Gm25316-201ENSMUST00000116826 118 ntBASIC1.26□□□□□ -2.21
Trim58Q5NCC9 Gm16032-201ENSMUST00000118534 168 ntBASIC1.26□□□□□ -2.21
Trim58Q5NCC9 Gm11792-201ENSMUST00000120640 168 ntBASIC1.26□□□□□ -2.21
Trim58Q5NCC9 Gm23277-201ENSMUST00000157914 136 ntBASIC1.26□□□□□ -2.21
Trim58Q5NCC9 Gm24634-201ENSMUST00000158672 107 ntBASIC1.26□□□□□ -2.21
Trim58Q5NCC9 Gm24415-201ENSMUST00000180218 107 ntBASIC1.26□□□□□ -2.21
Trim58Q5NCC9 Mir6380-201ENSMUST00000184334 81 ntBASIC1.26□□□□□ -2.21
Trim58Q5NCC9 Gm44326-201ENSMUST00000198226 101 ntBASIC1.26□□□□□ -2.21
Trim58Q5NCC9 Gm44921-201ENSMUST00000205290 301 ntBASIC1.26□□□□□ -2.21
Trim58Q5NCC9 Gm22743-201ENSMUST00000083445 133 ntBASIC1.26□□□□□ -2.21
Trim58Q5NCC9 Mir467g-201ENSMUST00000116906 120 ntBASIC1.25□□□□□ -2.21
Trim58Q5NCC9 Gm24594-201ENSMUST00000122502 99 ntBASIC1.25□□□□□ -2.21
Trim58Q5NCC9 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC1.25□□□□□ -2.21
Trim58Q5NCC9 Mir1931-201ENSMUST00000158589 119 ntBASIC1.25□□□□□ -2.21
Trim58Q5NCC9 Gm22259-201ENSMUST00000178926 107 ntBASIC1.25□□□□□ -2.21
Trim58Q5NCC9 AC154994.1-201ENSMUST00000217395 302 ntBASIC1.25□□□□□ -2.21
Trim58Q5NCC9 CT010449.1-201ENSMUST00000220624 153 ntBASIC1.25□□□□□ -2.21
Trim58Q5NCC9 AC126939.3-201ENSMUST00000226061 166 ntBASIC1.25□□□□□ -2.21
Trim58Q5NCC9 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
Trim58Q5NCC9 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
Trim58Q5NCC9 Gm11334-201ENSMUST00000121969 156 ntBASIC1.24□□□□□ -2.21
Trim58Q5NCC9 Gm23545-201ENSMUST00000158205 104 ntBASIC1.24□□□□□ -2.21
Trim58Q5NCC9 Gm24229-201ENSMUST00000158830 118 ntBASIC1.24□□□□□ -2.21
Trim58Q5NCC9 Gm25935-201ENSMUST00000178746 107 ntBASIC1.24□□□□□ -2.21
Trim58Q5NCC9 Gm44052-201ENSMUST00000203382 396 ntBASIC1.24□□□□□ -2.21
Trim58Q5NCC9 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC1.24□□□□□ -2.21
Trim58Q5NCC9 AC126691.1-201ENSMUST00000226534 202 ntBASIC1.24□□□□□ -2.21
Trim58Q5NCC9 Gm25855-201ENSMUST00000082787 72 ntBASIC1.24□□□□□ -2.21
Trim58Q5NCC9 Gm25565-201ENSMUST00000104605 105 ntBASIC1.23□□□□□ -2.21
Trim58Q5NCC9 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
Trim58Q5NCC9 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC1.23□□□□□ -2.21
Trim58Q5NCC9 Gm25828-201ENSMUST00000157087 95 ntBASIC1.23□□□□□ -2.21
Trim58Q5NCC9 Gm25834-201ENSMUST00000158916 101 ntBASIC1.23□□□□□ -2.21
Trim58Q5NCC9 Gm25750-201ENSMUST00000175483 112 ntBASIC1.23□□□□□ -2.21
Trim58Q5NCC9 Gm28409-201ENSMUST00000187064 103 ntBASIC1.23□□□□□ -2.21
Trim58Q5NCC9 Gm44308-201ENSMUST00000197080 99 ntBASIC1.23□□□□□ -2.21
Trim58Q5NCC9 Gm46993-201ENSMUST00000220708 259 ntBASIC1.23□□□□□ -2.21
Trim58Q5NCC9 Mir410-201ENSMUST00000083563 81 ntBASIC1.23□□□□□ -2.21
Trim58Q5NCC9 Gm27047-201ENSMUST00000183072 1819 ntBASIC1.23□□□□□ -2.21
Trim58Q5NCC9 Mir544-201ENSMUST00000103813 78 ntBASIC1.22□□□□□ -2.21
Trim58Q5NCC9 Gm24915-201ENSMUST00000157288 78 ntBASIC1.22□□□□□ -2.21
Trim58Q5NCC9 Gm23339-201ENSMUST00000158962 139 ntBASIC1.22□□□□□ -2.21
Trim58Q5NCC9 Gm20391-201ENSMUST00000174722 106 ntBASIC1.22□□□□□ -2.21
Trim58Q5NCC9 Mir7665-201ENSMUST00000184907 63 ntBASIC1.22□□□□□ -2.21
Trim58Q5NCC9 Gm44464-201ENSMUST00000198010 138 ntBASIC1.22□□□□□ -2.21
Trim58Q5NCC9 Gm25895-201ENSMUST00000083714 100 ntBASIC1.22□□□□□ -2.21
Trim58Q5NCC9 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC1.21□□□□□ -2.22
Trim58Q5NCC9 Gm25068-201ENSMUST00000103895 110 ntBASIC1.21□□□□□ -2.22
Trim58Q5NCC9 Gm11856-201ENSMUST00000118712 276 ntBASIC1.21□□□□□ -2.22
Trim58Q5NCC9 Gm25423-201ENSMUST00000157609 107 ntBASIC1.21□□□□□ -2.22
Trim58Q5NCC9 Gm23967-201ENSMUST00000175062 78 ntBASIC1.21□□□□□ -2.22
Trim58Q5NCC9 Gm28669-201ENSMUST00000188400 100 ntBASIC1.21□□□□□ -2.22
Trim58Q5NCC9 AC159625.1-201ENSMUST00000220994 2625 ntBASIC1.21□□□□□ -2.22
Trim58Q5NCC9 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
Trim58Q5NCC9 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.21□□□□□ -2.22
Trim58Q5NCC9 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC1.2□□□□□ -2.22
Trim58Q5NCC9 Gm25558-201ENSMUST00000158083 106 ntBASIC1.2□□□□□ -2.22
Trim58Q5NCC9 Gm25494-201ENSMUST00000158143 100 ntBASIC1.2□□□□□ -2.22
Trim58Q5NCC9 Gm25223-201ENSMUST00000158200 110 ntBASIC1.2□□□□□ -2.22
Trim58Q5NCC9 Gm22888-201ENSMUST00000158640 77 ntBASIC1.2□□□□□ -2.22
Trim58Q5NCC9 AL928567.1-201ENSMUST00000197891 138 ntBASIC1.2□□□□□ -2.22
Trim58Q5NCC9 Gm43199-201ENSMUST00000200019 307 ntBASIC1.2□□□□□ -2.22
Trim58Q5NCC9 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC1.2□□□□□ -2.22
Trim58Q5NCC9 Gm24929-201ENSMUST00000083403 139 ntBASIC1.2□□□□□ -2.22
Trim58Q5NCC9 Gm12771-201ENSMUST00000120246 135 ntBASIC1.19□□□□□ -2.22
Trim58Q5NCC9 n-R5s73-201ENSMUST00000122508 107 ntBASIC1.19□□□□□ -2.22
Trim58Q5NCC9 Gm23655-201ENSMUST00000122627 105 ntBASIC1.19□□□□□ -2.22
Trim58Q5NCC9 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC1.19□□□□□ -2.22
Trim58Q5NCC9 Gm23170-201ENSMUST00000157158 106 ntBASIC1.19□□□□□ -2.22
Trim58Q5NCC9 Gm26415-201ENSMUST00000157673 292 ntBASIC1.19□□□□□ -2.22
Trim58Q5NCC9 Gm23267-201ENSMUST00000178490 132 ntBASIC1.19□□□□□ -2.22
Trim58Q5NCC9 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC1.19□□□□□ -2.22
Trim58Q5NCC9 Mir6962-201ENSMUST00000199512 63 ntBASIC1.19□□□□□ -2.22
Trim58Q5NCC9 Gm44853-201ENSMUST00000209070 250 ntBASIC1.19□□□□□ -2.22
Trim58Q5NCC9 Vmn2r-ps50-201ENSMUST00000209317 120 ntBASIC1.19□□□□□ -2.22
Trim58Q5NCC9 Gm26204-201ENSMUST00000082906 107 ntBASIC1.19□□□□□ -2.22
Trim58Q5NCC9 Gm42718-201ENSMUST00000197319 2681 ntBASIC1.19□□□□□ -2.22
Trim58Q5NCC9 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
Trim58Q5NCC9 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
Trim58Q5NCC9 Gm24132-201ENSMUST00000104745 91 ntBASIC1.18□□□□□ -2.22
Trim58Q5NCC9 Gm23996-201ENSMUST00000158062 131 ntBASIC1.18□□□□□ -2.22
Trim58Q5NCC9 Gm24345-201ENSMUST00000158706 124 ntBASIC1.18□□□□□ -2.22
Trim58Q5NCC9 Traj60-201ENSMUST00000167781 54 ntBASIC1.18□□□□□ -2.22
Trim58Q5NCC9 Trav5d-3-201ENSMUST00000170041 270 ntBASIC1.18□□□□□ -2.22
Trim58Q5NCC9 Mir5104-201ENSMUST00000175319 94 ntBASIC1.18□□□□□ -2.22
Trim58Q5NCC9 Gm25464-201ENSMUST00000175481 107 ntBASIC1.18□□□□□ -2.22
Trim58Q5NCC9 Gm27326-201ENSMUST00000183504 95 ntBASIC1.18□□□□□ -2.22
Trim58Q5NCC9 Gm9251-201ENSMUST00000197202 628 ntBASIC1.18□□□□□ -2.22
Trim58Q5NCC9 CT033781.2-201ENSMUST00000221113 153 ntBASIC1.18□□□□□ -2.22
Trim58Q5NCC9 AC122242.1-201ENSMUST00000224650 304 ntBASIC1.18□□□□□ -2.22
Trim58Q5NCC9 AC129085.1-201ENSMUST00000225263 165 ntBASIC1.18□□□□□ -2.22
Trim58Q5NCC9 Mir34a-201ENSMUST00000083559 102 ntBASIC1.18□□□□□ -2.22
Trim58Q5NCC9 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
Trim58Q5NCC9 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.17□□□□□ -2.22
Trim58Q5NCC9 Gm22767-201ENSMUST00000158365 165 ntBASIC1.17□□□□□ -2.22
Trim58Q5NCC9 Gm25768-201ENSMUST00000158570 98 ntBASIC1.17□□□□□ -2.22
Trim58Q5NCC9 Gm22403-201ENSMUST00000174919 84 ntBASIC1.17□□□□□ -2.22
Trim58Q5NCC9 Gm26073-201ENSMUST00000179906 127 ntBASIC1.17□□□□□ -2.22
Trim58Q5NCC9 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 187.3 ms