Protein–RNA interactions for Protein: Q5I043

Usp28, Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

Predictions only

Length 1,051 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28Q5I043 Mir344d-3-201ENSMUST00000175458 80 ntBASIC0.87□□□□□ -2.27
Usp28Q5I043 Mir6240-201ENSMUST00000184281 117 ntBASIC0.87□□□□□ -2.27
Usp28Q5I043 Gm37715-201ENSMUST00000193206 235 ntBASIC0.87□□□□□ -2.27
Usp28Q5I043 Gm45508-201ENSMUST00000209298 299 ntBASIC0.87□□□□□ -2.27
Usp28Q5I043 AC165157.3-201ENSMUST00000220815 103 ntBASIC0.87□□□□□ -2.27
Usp28Q5I043 Gm23735-201ENSMUST00000082551 134 ntBASIC0.87□□□□□ -2.27
Usp28Q5I043 Gm22358-201ENSMUST00000082877 122 ntBASIC0.87□□□□□ -2.27
Usp28Q5I043 Gm25188-201ENSMUST00000083913 122 ntBASIC0.87□□□□□ -2.27
Usp28Q5I043 Mir881-201ENSMUST00000104844 78 ntBASIC0.86□□□□□ -2.27
Usp28Q5I043 Gm22163-201ENSMUST00000158408 135 ntBASIC0.86□□□□□ -2.27
Usp28Q5I043 Gm23114-201ENSMUST00000158478 117 ntBASIC0.86□□□□□ -2.27
Usp28Q5I043 Mir6905-201ENSMUST00000184228 70 ntBASIC0.86□□□□□ -2.27
Usp28Q5I043 Gm28344-201ENSMUST00000185704 279 ntBASIC0.86□□□□□ -2.27
Usp28Q5I043 Gm28862-201ENSMUST00000188246 163 ntBASIC0.86□□□□□ -2.27
Usp28Q5I043 Gm28669-201ENSMUST00000188400 100 ntBASIC0.86□□□□□ -2.27
Usp28Q5I043 Gm43898-201ENSMUST00000204456 424 ntBASIC0.86□□□□□ -2.27
Usp28Q5I043 Gm44057-201ENSMUST00000204547 96 ntBASIC0.86□□□□□ -2.27
Usp28Q5I043 Gm45859-201ENSMUST00000212794 214 ntBASIC0.86□□□□□ -2.27
Usp28Q5I043 CT009696.1-201ENSMUST00000215745 256 ntBASIC0.86□□□□□ -2.27
Usp28Q5I043 Gm25634-201ENSMUST00000082667 105 ntBASIC0.86□□□□□ -2.27
Usp28Q5I043 Mir880-201ENSMUST00000104809 78 ntBASIC0.85□□□□□ -2.27
Usp28Q5I043 n-R5s157-201ENSMUST00000122543 121 ntBASIC0.85□□□□□ -2.27
Usp28Q5I043 Gm23328-201ENSMUST00000157418 132 ntBASIC0.85□□□□□ -2.27
Usp28Q5I043 Gm25720-201ENSMUST00000157503 105 ntBASIC0.85□□□□□ -2.27
Usp28Q5I043 Mir7059-201ENSMUST00000184825 59 ntBASIC0.85□□□□□ -2.27
Usp28Q5I043 Olfr1483-ps1-201ENSMUST00000208241 334 ntBASIC0.85□□□□□ -2.27
Usp28Q5I043 AC129085.1-201ENSMUST00000225263 165 ntBASIC0.85□□□□□ -2.27
Usp28Q5I043 mt-Ti-201ENSMUST00000082393 69 ntBASIC0.85□□□□□ -2.27
Usp28Q5I043 Gm25142-201ENSMUST00000082698 107 ntBASIC0.85□□□□□ -2.27
Usp28Q5I043 AC160984.1-201ENSMUST00000225855 3154 ntBASIC0.84□□□□□ -2.27
Usp28Q5I043 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
Usp28Q5I043 Gm22586-201ENSMUST00000157507 122 ntBASIC0.84□□□□□ -2.27
Usp28Q5I043 Gm25362-201ENSMUST00000158854 105 ntBASIC0.84□□□□□ -2.27
Usp28Q5I043 Gm27420-201ENSMUST00000183823 79 ntBASIC0.84□□□□□ -2.27
Usp28Q5I043 Gm36189-201ENSMUST00000204113 523 ntBASIC0.84□□□□□ -2.27
Usp28Q5I043 Gm44921-201ENSMUST00000205290 301 ntBASIC0.84□□□□□ -2.27
Usp28Q5I043 Gm25851-201ENSMUST00000082794 107 ntBASIC0.84□□□□□ -2.27
Usp28Q5I043 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC0.84□□□□□ -2.27
Usp28Q5I043 AC127302.3-201ENSMUST00000215480 2791 ntBASIC0.84□□□□□ -2.28
Usp28Q5I043 Gm24015-201ENSMUST00000157725 232 ntBASIC0.83□□□□□ -2.28
Usp28Q5I043 Gm24000-201ENSMUST00000158063 89 ntBASIC0.83□□□□□ -2.28
Usp28Q5I043 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC0.83□□□□□ -2.28
Usp28Q5I043 Gm27585-201ENSMUST00000183717 199 ntBASIC0.83□□□□□ -2.28
Usp28Q5I043 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC0.83□□□□□ -2.28
Usp28Q5I043 Gm25538-201ENSMUST00000101943 107 ntBASIC0.82□□□□□ -2.28
Usp28Q5I043 Gm26293-201ENSMUST00000104170 84 ntBASIC0.82□□□□□ -2.28
Usp28Q5I043 Gm11204-201ENSMUST00000122438 147 ntBASIC0.82□□□□□ -2.28
Usp28Q5I043 Gm25783-201ENSMUST00000122525 190 ntBASIC0.82□□□□□ -2.28
Usp28Q5I043 Gm23655-201ENSMUST00000122627 105 ntBASIC0.82□□□□□ -2.28
Usp28Q5I043 Gm26026-201ENSMUST00000122726 123 ntBASIC0.82□□□□□ -2.28
Usp28Q5I043 Gm24345-201ENSMUST00000158706 124 ntBASIC0.82□□□□□ -2.28
Usp28Q5I043 Gm26073-201ENSMUST00000179906 127 ntBASIC0.82□□□□□ -2.28
Usp28Q5I043 Gm27894-201ENSMUST00000184177 92 ntBASIC0.82□□□□□ -2.28
Usp28Q5I043 Gm42988-201ENSMUST00000198116 225 ntBASIC0.82□□□□□ -2.28
Usp28Q5I043 Gm44301-201ENSMUST00000200362 143 ntBASIC0.82□□□□□ -2.28
Usp28Q5I043 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC0.82□□□□□ -2.28
Usp28Q5I043 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
Usp28Q5I043 Mir146-201ENSMUST00000083667 65 ntBASIC0.82□□□□□ -2.28
Usp28Q5I043 Gm25506-201ENSMUST00000104339 70 ntBASIC0.81□□□□□ -2.28
Usp28Q5I043 Gm22544-201ENSMUST00000104349 127 ntBASIC0.81□□□□□ -2.28
Usp28Q5I043 Snord89-201ENSMUST00000104516 110 ntBASIC0.81□□□□□ -2.28
Usp28Q5I043 Mir654-201ENSMUST00000104787 84 ntBASIC0.81□□□□□ -2.28
Usp28Q5I043 Gm23584-201ENSMUST00000157655 129 ntBASIC0.81□□□□□ -2.28
Usp28Q5I043 Gm24221-201ENSMUST00000158833 313 ntBASIC0.81□□□□□ -2.28
Usp28Q5I043 Mir3968-201ENSMUST00000175355 100 ntBASIC0.81□□□□□ -2.28
Usp28Q5I043 Gm27974-201ENSMUST00000183415 105 ntBASIC0.81□□□□□ -2.28
Usp28Q5I043 Gm38323-201ENSMUST00000192450 210 ntBASIC0.81□□□□□ -2.28
Usp28Q5I043 Gm44308-201ENSMUST00000197080 99 ntBASIC0.81□□□□□ -2.28
Usp28Q5I043 Gm45471-201ENSMUST00000211270 281 ntBASIC0.81□□□□□ -2.28
Usp28Q5I043 AC154213.2-201ENSMUST00000227138 187 ntBASIC0.81□□□□□ -2.28
Usp28Q5I043 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC0.81□□□□□ -2.28
Usp28Q5I043 Gm14671-201ENSMUST00000121790 262 ntBASIC0.8□□□□□ -2.28
Usp28Q5I043 Gm28020-201ENSMUST00000157739 67 ntBASIC0.8□□□□□ -2.28
Usp28Q5I043 Gm23893-201ENSMUST00000158106 134 ntBASIC0.8□□□□□ -2.28
Usp28Q5I043 Mir669k-201ENSMUST00000177742 127 ntBASIC0.8□□□□□ -2.28
Usp28Q5I043 Gm25673-201ENSMUST00000179957 127 ntBASIC0.8□□□□□ -2.28
Usp28Q5I043 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC0.8□□□□□ -2.28
Usp28Q5I043 Gm24762-201ENSMUST00000083689 104 ntBASIC0.8□□□□□ -2.28
Usp28Q5I043 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC0.79□□□□□ -2.28
Usp28Q5I043 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC0.79□□□□□ -2.28
Usp28Q5I043 Gm14568-201ENSMUST00000119321 294 ntBASIC0.79□□□□□ -2.28
Usp28Q5I043 Gm24594-201ENSMUST00000122502 99 ntBASIC0.79□□□□□ -2.28
Usp28Q5I043 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC0.79□□□□□ -2.28
Usp28Q5I043 Gm25011-201ENSMUST00000158398 126 ntBASIC0.79□□□□□ -2.28
Usp28Q5I043 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC0.79□□□□□ -2.28
Usp28Q5I043 Gm25949-201ENSMUST00000175333 114 ntBASIC0.79□□□□□ -2.28
Usp28Q5I043 Mir7052-201ENSMUST00000184821 65 ntBASIC0.79□□□□□ -2.28
Usp28Q5I043 Gm28256-201ENSMUST00000188953 139 ntBASIC0.79□□□□□ -2.28
Usp28Q5I043 Gm28559-201ENSMUST00000190532 139 ntBASIC0.79□□□□□ -2.28
Usp28Q5I043 Ighv12-2-201ENSMUST00000191949 362 ntBASIC0.79□□□□□ -2.28
Usp28Q5I043 Gm18188-201ENSMUST00000219386 478 ntBASIC0.79□□□□□ -2.28
Usp28Q5I043 Gm22283-201ENSMUST00000082556 161 ntBASIC0.79□□□□□ -2.28
Usp28Q5I043 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
Usp28Q5I043 Gm22051-201ENSMUST00000117002 127 ntBASIC0.78□□□□□ -2.28
Usp28Q5I043 Gm26415-201ENSMUST00000157673 292 ntBASIC0.78□□□□□ -2.28
Usp28Q5I043 Gm44909-201ENSMUST00000208756 165 ntBASIC0.78□□□□□ -2.28
Usp28Q5I043 Gm24624-201ENSMUST00000082617 164 ntBASIC0.78□□□□□ -2.28
Usp28Q5I043 Gm22704-201ENSMUST00000083027 137 ntBASIC0.78□□□□□ -2.28
Usp28Q5I043 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC0.78□□□□□ -2.29
Usp28Q5I043 AC159625.1-201ENSMUST00000220994 2625 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 76,532 protein–RNA pairs in 140.2 ms