Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm22664-201ENSMUST00000158719 105 ntBASIC1.08□□□□□ -2.24
Trim40Q3UWA4 Gm23951-201ENSMUST00000104029 132 ntBASIC1.07□□□□□ -2.24
Trim40Q3UWA4 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
Trim40Q3UWA4 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC1.07□□□□□ -2.24
Trim40Q3UWA4 Gm25390-201ENSMUST00000157341 103 ntBASIC1.07□□□□□ -2.24
Trim40Q3UWA4 Gm24000-201ENSMUST00000158063 89 ntBASIC1.07□□□□□ -2.24
Trim40Q3UWA4 Gm23545-201ENSMUST00000158205 104 ntBASIC1.07□□□□□ -2.24
Trim40Q3UWA4 Gm22686-201ENSMUST00000082847 100 ntBASIC1.07□□□□□ -2.24
Trim40Q3UWA4 Gm25494-201ENSMUST00000158143 100 ntBASIC1.06□□□□□ -2.24
Trim40Q3UWA4 Gm22767-201ENSMUST00000158365 165 ntBASIC1.06□□□□□ -2.24
Trim40Q3UWA4 Gm24345-201ENSMUST00000158706 124 ntBASIC1.06□□□□□ -2.24
Trim40Q3UWA4 Mir7091-201ENSMUST00000184075 79 ntBASIC1.06□□□□□ -2.24
Trim40Q3UWA4 CT010449.1-201ENSMUST00000220624 153 ntBASIC1.06□□□□□ -2.24
Trim40Q3UWA4 CT025630.1-201ENSMUST00000227901 172 ntBASIC1.06□□□□□ -2.24
Trim40Q3UWA4 Snora41-201ENSMUST00000082668 132 ntBASIC1.06□□□□□ -2.24
Trim40Q3UWA4 Gm24929-201ENSMUST00000083403 139 ntBASIC1.06□□□□□ -2.24
Trim40Q3UWA4 Gm25895-201ENSMUST00000083714 100 ntBASIC1.06□□□□□ -2.24
Trim40Q3UWA4 Mir466p-201ENSMUST00000103925 89 ntBASIC1.05□□□□□ -2.24
Trim40Q3UWA4 Gm14671-201ENSMUST00000121790 262 ntBASIC1.05□□□□□ -2.24
Trim40Q3UWA4 Gm26279-201ENSMUST00000157095 102 ntBASIC1.05□□□□□ -2.24
Trim40Q3UWA4 Gm26415-201ENSMUST00000157673 292 ntBASIC1.05□□□□□ -2.24
Trim40Q3UWA4 Gm23258-201ENSMUST00000158319 106 ntBASIC1.05□□□□□ -2.24
Trim40Q3UWA4 Gm22802-201ENSMUST00000175621 89 ntBASIC1.05□□□□□ -2.24
Trim40Q3UWA4 Gm26073-201ENSMUST00000179906 127 ntBASIC1.05□□□□□ -2.24
Trim40Q3UWA4 Mir7225-201ENSMUST00000184178 54 ntBASIC1.05□□□□□ -2.24
Trim40Q3UWA4 Gm43427-201ENSMUST00000198188 331 ntBASIC1.05□□□□□ -2.24
Trim40Q3UWA4 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC1.05□□□□□ -2.24
Trim40Q3UWA4 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
Trim40Q3UWA4 AC159625.1-201ENSMUST00000220994 2625 ntBASIC1.05□□□□□ -2.24
Trim40Q3UWA4 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
Trim40Q3UWA4 Gm26074-201ENSMUST00000104063 129 ntBASIC1.04□□□□□ -2.24
Trim40Q3UWA4 Gm15069-201ENSMUST00000117792 192 ntBASIC1.04□□□□□ -2.24
Trim40Q3UWA4 Gm14838-201ENSMUST00000118913 248 ntBASIC1.04□□□□□ -2.24
Trim40Q3UWA4 Gm15068-201ENSMUST00000119796 192 ntBASIC1.04□□□□□ -2.24
Trim40Q3UWA4 Gm13246-201ENSMUST00000120994 315 ntBASIC1.04□□□□□ -2.24
Trim40Q3UWA4 Gm25223-201ENSMUST00000158200 110 ntBASIC1.04□□□□□ -2.24
Trim40Q3UWA4 Gm26426-201ENSMUST00000177866 123 ntBASIC1.04□□□□□ -2.24
Trim40Q3UWA4 Gm26060-201ENSMUST00000180094 123 ntBASIC1.04□□□□□ -2.24
Trim40Q3UWA4 Gm27419-201ENSMUST00000184576 109 ntBASIC1.04□□□□□ -2.24
Trim40Q3UWA4 Gm44358-201ENSMUST00000196301 98 ntBASIC1.04□□□□□ -2.24
Trim40Q3UWA4 Gm45544-201ENSMUST00000211130 88 ntBASIC1.04□□□□□ -2.24
Trim40Q3UWA4 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC1.04□□□□□ -2.24
Trim40Q3UWA4 AC154282.1-201ENSMUST00000223154 265 ntBASIC1.04□□□□□ -2.24
Trim40Q3UWA4 Gm27047-201ENSMUST00000183072 1819 ntBASIC1.03□□□□□ -2.24
Trim40Q3UWA4 Gm24171-201ENSMUST00000104126 131 ntBASIC1.03□□□□□ -2.24
Trim40Q3UWA4 Gm25878-201ENSMUST00000104327 93 ntBASIC1.03□□□□□ -2.24
Trim40Q3UWA4 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC1.03□□□□□ -2.24
Trim40Q3UWA4 Gm25828-201ENSMUST00000157087 95 ntBASIC1.03□□□□□ -2.24
Trim40Q3UWA4 Gm24777-201ENSMUST00000157644 107 ntBASIC1.03□□□□□ -2.24
Trim40Q3UWA4 Gm22556-201ENSMUST00000157803 100 ntBASIC1.03□□□□□ -2.24
Trim40Q3UWA4 Gm25267-201ENSMUST00000158522 63 ntBASIC1.03□□□□□ -2.24
Trim40Q3UWA4 Mir344d-3-201ENSMUST00000175458 80 ntBASIC1.03□□□□□ -2.24
Trim40Q3UWA4 Mir8119-201ENSMUST00000183371 129 ntBASIC1.03□□□□□ -2.24
Trim40Q3UWA4 Gm28862-201ENSMUST00000188246 163 ntBASIC1.03□□□□□ -2.24
Trim40Q3UWA4 Gm45268-201ENSMUST00000210046 370 ntBASIC1.03□□□□□ -2.24
Trim40Q3UWA4 Gm22283-201ENSMUST00000082556 161 ntBASIC1.03□□□□□ -2.24
Trim40Q3UWA4 Gm25650-201ENSMUST00000083784 162 ntBASIC1.03□□□□□ -2.24
Trim40Q3UWA4 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
Trim40Q3UWA4 Mir654-201ENSMUST00000104787 84 ntBASIC1.02□□□□□ -2.25
Trim40Q3UWA4 Gm25323-201ENSMUST00000122555 103 ntBASIC1.02□□□□□ -2.25
Trim40Q3UWA4 n-R5s63-201ENSMUST00000122756 103 ntBASIC1.02□□□□□ -2.25
Trim40Q3UWA4 Gm25949-201ENSMUST00000175333 114 ntBASIC1.02□□□□□ -2.25
Trim40Q3UWA4 Gm24638-201ENSMUST00000179807 132 ntBASIC1.02□□□□□ -2.25
Trim40Q3UWA4 Gm24020-201ENSMUST00000180156 108 ntBASIC1.02□□□□□ -2.25
Trim40Q3UWA4 Gm44408-201ENSMUST00000200205 66 ntBASIC1.02□□□□□ -2.25
Trim40Q3UWA4 Gm22704-201ENSMUST00000083027 137 ntBASIC1.02□□□□□ -2.25
Trim40Q3UWA4 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
Trim40Q3UWA4 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
Trim40Q3UWA4 Gm23336-201ENSMUST00000117023 123 ntBASIC1.01□□□□□ -2.25
Trim40Q3UWA4 n-R5s87-201ENSMUST00000122752 116 ntBASIC1.01□□□□□ -2.25
Trim40Q3UWA4 Gm25834-201ENSMUST00000158916 101 ntBASIC1.01□□□□□ -2.25
Trim40Q3UWA4 Gm25464-201ENSMUST00000175481 107 ntBASIC1.01□□□□□ -2.25
Trim40Q3UWA4 Mir7063-201ENSMUST00000184158 91 ntBASIC1.01□□□□□ -2.25
Trim40Q3UWA4 Gm44464-201ENSMUST00000198010 138 ntBASIC1.01□□□□□ -2.25
Trim40Q3UWA4 Gm46993-201ENSMUST00000220708 259 ntBASIC1.01□□□□□ -2.25
Trim40Q3UWA4 Gm26224-201ENSMUST00000082506 80 ntBASIC1.01□□□□□ -2.25
Trim40Q3UWA4 Gm43877-201ENSMUST00000205029 2238 ntBASIC1□□□□□ -2.25
Trim40Q3UWA4 Gm25832-201ENSMUST00000104140 130 ntBASIC1□□□□□ -2.25
Trim40Q3UWA4 Gm22233-201ENSMUST00000157464 114 ntBASIC1□□□□□ -2.25
Trim40Q3UWA4 Gm23670-201ENSMUST00000157469 119 ntBASIC1□□□□□ -2.25
Trim40Q3UWA4 Gm24559-201ENSMUST00000157519 121 ntBASIC1□□□□□ -2.25
Trim40Q3UWA4 Gm23901-201ENSMUST00000157570 107 ntBASIC1□□□□□ -2.25
Trim40Q3UWA4 Gm24015-201ENSMUST00000157725 232 ntBASIC1□□□□□ -2.25
Trim40Q3UWA4 Gm24729-201ENSMUST00000158225 137 ntBASIC1□□□□□ -2.25
Trim40Q3UWA4 Gm25868-201ENSMUST00000158253 114 ntBASIC1□□□□□ -2.25
Trim40Q3UWA4 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC1□□□□□ -2.25
Trim40Q3UWA4 Gm25069-201ENSMUST00000175238 86 ntBASIC1□□□□□ -2.25
Trim40Q3UWA4 Gm20118-201ENSMUST00000187207 162 ntBASIC1□□□□□ -2.25
Trim40Q3UWA4 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC1□□□□□ -2.25
Trim40Q3UWA4 AC122320.1-201ENSMUST00000227233 105 ntBASIC1□□□□□ -2.25
Trim40Q3UWA4 Gm25482-201ENSMUST00000083225 107 ntBASIC1□□□□□ -2.25
Trim40Q3UWA4 Gm24808-201ENSMUST00000157993 118 ntBASIC0.99□□□□□ -2.25
Trim40Q3UWA4 Gm22387-201ENSMUST00000158191 131 ntBASIC0.99□□□□□ -2.25
Trim40Q3UWA4 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC0.99□□□□□ -2.25
Trim40Q3UWA4 Gm25128-201ENSMUST00000083339 76 ntBASIC0.99□□□□□ -2.25
Trim40Q3UWA4 Gm10730-201ENSMUST00000194097 2723 ntBASIC0.99□□□□□ -2.25
Trim40Q3UWA4 Gm14914-201ENSMUST00000117576 2031 ntBASIC0.98□□□□□ -2.25
Trim40Q3UWA4 n-R5s157-201ENSMUST00000122543 121 ntBASIC0.98□□□□□ -2.25
Trim40Q3UWA4 Gm22551-201ENSMUST00000157795 103 ntBASIC0.98□□□□□ -2.25
Trim40Q3UWA4 Gm24076-201ENSMUST00000158179 94 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 76,532 protein–RNA pairs in 138.8 ms