Protein–RNA interactions for Protein: Q3ULM6

Uspl1, SUMO-specific isopeptidase USPL1, mousemouse

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uspl1Q3ULM6 Mir222-201ENSMUST00000083537 79 ntBASIC2.58□□□□□ -2
Uspl1Q3ULM6 Mir369-201ENSMUST00000083627 79 ntBASIC2.58□□□□□ -2
Uspl1Q3ULM6 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
Uspl1Q3ULM6 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Uspl1Q3ULM6 Gm23080-201ENSMUST00000157846 103 ntBASIC2.57□□□□□ -2
Uspl1Q3ULM6 Gm23043-201ENSMUST00000157890 109 ntBASIC2.57□□□□□ -2
Uspl1Q3ULM6 Gm24842-201ENSMUST00000158681 54 ntBASIC2.57□□□□□ -2
Uspl1Q3ULM6 Snord50a-201ENSMUST00000178154 72 ntBASIC2.57□□□□□ -2
Uspl1Q3ULM6 Gm24463-201ENSMUST00000178417 72 ntBASIC2.57□□□□□ -2
Uspl1Q3ULM6 Gm29535-201ENSMUST00000185723 109 ntBASIC2.57□□□□□ -2
Uspl1Q3ULM6 Gm28409-201ENSMUST00000187064 103 ntBASIC2.57□□□□□ -2
Uspl1Q3ULM6 Gm28143-201ENSMUST00000191082 109 ntBASIC2.57□□□□□ -2
Uspl1Q3ULM6 Gm44308-201ENSMUST00000197080 99 ntBASIC2.57□□□□□ -2
Uspl1Q3ULM6 Gm42807-201ENSMUST00000200141 329 ntBASIC2.57□□□□□ -2
Uspl1Q3ULM6 Gm45791-201ENSMUST00000212908 352 ntBASIC2.57□□□□□ -2
Uspl1Q3ULM6 AC149294.9-201ENSMUST00000227256 164 ntBASIC2.57□□□□□ -2
Uspl1Q3ULM6 Snord61-201ENSMUST00000083176 71 ntBASIC2.57□□□□□ -2
Uspl1Q3ULM6 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.56□□□□□ -2
Uspl1Q3ULM6 Gm23548-201ENSMUST00000158963 106 ntBASIC2.56□□□□□ -2
Uspl1Q3ULM6 Gm27991-201ENSMUST00000184804 137 ntBASIC2.56□□□□□ -2
Uspl1Q3ULM6 Gm45386-201ENSMUST00000210194 218 ntBASIC2.56□□□□□ -2
Uspl1Q3ULM6 CT571266.1-201ENSMUST00000222859 153 ntBASIC2.56□□□□□ -2
Uspl1Q3ULM6 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Uspl1Q3ULM6 Gm43877-201ENSMUST00000205029 2238 ntBASIC2.56□□□□□ -2
Uspl1Q3ULM6 n-R5s159-201ENSMUST00000122681 120 ntBASIC2.55□□□□□ -2
Uspl1Q3ULM6 Gm26091-201ENSMUST00000122704 82 ntBASIC2.55□□□□□ -2
Uspl1Q3ULM6 Gm23983-201ENSMUST00000157142 114 ntBASIC2.55□□□□□ -2
Uspl1Q3ULM6 Gm22558-201ENSMUST00000157326 95 ntBASIC2.55□□□□□ -2
Uspl1Q3ULM6 Gm22612-201ENSMUST00000158293 101 ntBASIC2.55□□□□□ -2
Uspl1Q3ULM6 Gm23504-201ENSMUST00000158988 95 ntBASIC2.55□□□□□ -2
Uspl1Q3ULM6 Mir7215-201ENSMUST00000200383 51 ntBASIC2.55□□□□□ -2
Uspl1Q3ULM6 AC144671.1-201ENSMUST00000215265 99 ntBASIC2.55□□□□□ -2
Uspl1Q3ULM6 AC133517.1-203ENSMUST00000225570 390 ntBASIC2.55□□□□□ -2
Uspl1Q3ULM6 AC126939.3-201ENSMUST00000226061 166 ntBASIC2.55□□□□□ -2
Uspl1Q3ULM6 Gm24536-201ENSMUST00000083144 107 ntBASIC2.55□□□□□ -2
Uspl1Q3ULM6 Snord104-201ENSMUST00000083192 70 ntBASIC2.55□□□□□ -2
Uspl1Q3ULM6 Mir322-201ENSMUST00000083484 95 ntBASIC2.55□□□□□ -2
Uspl1Q3ULM6 Gm42664-201ENSMUST00000199417 3239 ntBASIC2.55□□□□□ -2
Uspl1Q3ULM6 AC161250.2-201ENSMUST00000215114 3107 ntBASIC2.55□□□□□ -2
Uspl1Q3ULM6 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Uspl1Q3ULM6 Gm11644-201ENSMUST00000119735 150 ntBASIC2.54□□□□□ -2
Uspl1Q3ULM6 Gm26084-201ENSMUST00000157903 104 ntBASIC2.54□□□□□ -2
Uspl1Q3ULM6 Gm22731-201ENSMUST00000158086 94 ntBASIC2.54□□□□□ -2
Uspl1Q3ULM6 Gm38364-201ENSMUST00000191814 179 ntBASIC2.54□□□□□ -2
Uspl1Q3ULM6 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.54□□□□□ -2
Uspl1Q3ULM6 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
Uspl1Q3ULM6 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC2.53□□□□□ -2
Uspl1Q3ULM6 Gm24232-201ENSMUST00000104314 132 ntBASIC2.53□□□□□ -2
Uspl1Q3ULM6 Gm23907-201ENSMUST00000104595 189 ntBASIC2.53□□□□□ -2
Uspl1Q3ULM6 Gm24632-201ENSMUST00000122770 323 ntBASIC2.53□□□□□ -2
Uspl1Q3ULM6 Gm24747-201ENSMUST00000157835 87 ntBASIC2.53□□□□□ -2
Uspl1Q3ULM6 Rnu7-201ENSMUST00000158458 62 ntBASIC2.53□□□□□ -2
Uspl1Q3ULM6 Gm26360-201ENSMUST00000158872 103 ntBASIC2.53□□□□□ -2
Uspl1Q3ULM6 Gm27878-201ENSMUST00000184000 106 ntBASIC2.53□□□□□ -2
Uspl1Q3ULM6 Gm44326-201ENSMUST00000198226 101 ntBASIC2.53□□□□□ -2
Uspl1Q3ULM6 Gm35736-201ENSMUST00000203681 313 ntBASIC2.53□□□□□ -2
Uspl1Q3ULM6 Gm25681-201ENSMUST00000083938 106 ntBASIC2.53□□□□□ -2
Uspl1Q3ULM6 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Uspl1Q3ULM6 Gm26077-201ENSMUST00000104064 123 ntBASIC2.52□□□□□ -2.01
Uspl1Q3ULM6 Gm25882-201ENSMUST00000157784 85 ntBASIC2.52□□□□□ -2.01
Uspl1Q3ULM6 Gm22515-201ENSMUST00000158273 305 ntBASIC2.52□□□□□ -2.01
Uspl1Q3ULM6 Gm27668-201ENSMUST00000184188 120 ntBASIC2.52□□□□□ -2.01
Uspl1Q3ULM6 Gm37116-201ENSMUST00000195161 147 ntBASIC2.52□□□□□ -2.01
Uspl1Q3ULM6 Gm43381-201ENSMUST00000198553 165 ntBASIC2.52□□□□□ -2.01
Uspl1Q3ULM6 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC2.52□□□□□ -2.01
Uspl1Q3ULM6 Snord118-201ENSMUST00000082965 135 ntBASIC2.52□□□□□ -2.01
Uspl1Q3ULM6 Mir155-201ENSMUST00000083463 65 ntBASIC2.52□□□□□ -2.01
Uspl1Q3ULM6 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.52□□□□□ -2.01
Uspl1Q3ULM6 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Uspl1Q3ULM6 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Uspl1Q3ULM6 AC124456.1-201ENSMUST00000217391 2597 ntBASIC2.51□□□□□ -2.01
Uspl1Q3ULM6 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Uspl1Q3ULM6 Gm23090-201ENSMUST00000177331 78 ntBASIC2.51□□□□□ -2.01
Uspl1Q3ULM6 AC159885.1-201ENSMUST00000222221 199 ntBASIC2.51□□□□□ -2.01
Uspl1Q3ULM6 mt-Ta-201ENSMUST00000082398 69 ntBASIC2.51□□□□□ -2.01
Uspl1Q3ULM6 Mir423-201ENSMUST00000083584 109 ntBASIC2.51□□□□□ -2.01
Uspl1Q3ULM6 Gm16265-201ENSMUST00000134558 108 ntBASIC2.5□□□□□ -2.01
Uspl1Q3ULM6 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Uspl1Q3ULM6 Mir7226-201ENSMUST00000184953 60 ntBASIC2.5□□□□□ -2.01
Uspl1Q3ULM6 Gm44057-201ENSMUST00000204547 96 ntBASIC2.5□□□□□ -2.01
Uspl1Q3ULM6 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC2.5□□□□□ -2.01
Uspl1Q3ULM6 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Uspl1Q3ULM6 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
Uspl1Q3ULM6 Gm44578-201ENSMUST00000207236 3835 ntBASIC2.49□□□□□ -2.01
Uspl1Q3ULM6 Gm44177-201ENSMUST00000204338 2667 ntBASIC2.49□□□□□ -2.01
Uspl1Q3ULM6 AC153966.1-201ENSMUST00000220106 3764 ntBASIC2.49□□□□□ -2.01
Uspl1Q3ULM6 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Uspl1Q3ULM6 Gm22031-201ENSMUST00000116945 126 ntBASIC2.49□□□□□ -2.01
Uspl1Q3ULM6 Gm25323-201ENSMUST00000122555 103 ntBASIC2.49□□□□□ -2.01
Uspl1Q3ULM6 Gm22708-201ENSMUST00000158987 103 ntBASIC2.49□□□□□ -2.01
Uspl1Q3ULM6 Mir6376-201ENSMUST00000185149 131 ntBASIC2.49□□□□□ -2.01
Uspl1Q3ULM6 AC098718.1-201ENSMUST00000226166 175 ntBASIC2.49□□□□□ -2.01
Uspl1Q3ULM6 mt-Tv-201ENSMUST00000082389 69 ntBASIC2.49□□□□□ -2.01
Uspl1Q3ULM6 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC2.49□□□□□ -2.01
Uspl1Q3ULM6 Gm24049-201ENSMUST00000102409 100 ntBASIC2.48□□□□□ -2.01
Uspl1Q3ULM6 Mir293-201ENSMUST00000104841 80 ntBASIC2.48□□□□□ -2.01
Uspl1Q3ULM6 Gm25544-201ENSMUST00000122676 120 ntBASIC2.48□□□□□ -2.01
Uspl1Q3ULM6 Gm18665-201ENSMUST00000189783 270 ntBASIC2.48□□□□□ -2.01
Uspl1Q3ULM6 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC2.48□□□□□ -2.01
Uspl1Q3ULM6 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 155.2 ms