Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm26421-201ENSMUST00000104279 132 ntBASIC0.17□□□□□ -2.38
Upf3bQ3ULL6 Gm15289-201ENSMUST00000117793 244 ntBASIC0.17□□□□□ -2.38
Upf3bQ3ULL6 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC0.17□□□□□ -2.38
Upf3bQ3ULL6 n-R5s6-201ENSMUST00000122663 88 ntBASIC0.17□□□□□ -2.38
Upf3bQ3ULL6 Gm26415-201ENSMUST00000157673 292 ntBASIC0.17□□□□□ -2.38
Upf3bQ3ULL6 Gm24500-201ENSMUST00000158447 124 ntBASIC0.17□□□□□ -2.38
Upf3bQ3ULL6 Gm25929-201ENSMUST00000082784 107 ntBASIC0.17□□□□□ -2.38
Upf3bQ3ULL6 Gm43944-201ENSMUST00000205220 120 ntBASIC0.16□□□□□ -2.38
Upf3bQ3ULL6 Snord69-201ENSMUST00000104024 80 ntBASIC0.15□□□□□ -2.39
Upf3bQ3ULL6 Gm22985-201ENSMUST00000122754 116 ntBASIC0.15□□□□□ -2.39
Upf3bQ3ULL6 Gm14298-201ENSMUST00000139032 237 ntBASIC0.15□□□□□ -2.39
Upf3bQ3ULL6 Gm16356-201ENSMUST00000143300 169 ntBASIC0.15□□□□□ -2.39
Upf3bQ3ULL6 Gm26090-201ENSMUST00000157897 128 ntBASIC0.15□□□□□ -2.39
Upf3bQ3ULL6 Gm23278-201ENSMUST00000157911 143 ntBASIC0.15□□□□□ -2.39
Upf3bQ3ULL6 Gm23262-201ENSMUST00000158323 168 ntBASIC0.15□□□□□ -2.39
Upf3bQ3ULL6 Gm27402-201ENSMUST00000183890 120 ntBASIC0.15□□□□□ -2.39
Upf3bQ3ULL6 Gm29818-201ENSMUST00000218070 165 ntBASIC0.15□□□□□ -2.39
Upf3bQ3ULL6 Snora20-201ENSMUST00000082703 128 ntBASIC0.15□□□□□ -2.39
Upf3bQ3ULL6 Gm12647-201ENSMUST00000118977 265 ntBASIC0.14□□□□□ -2.39
Upf3bQ3ULL6 Gm25827-201ENSMUST00000157089 107 ntBASIC0.14□□□□□ -2.39
Upf3bQ3ULL6 Gm24547-201ENSMUST00000158649 149 ntBASIC0.14□□□□□ -2.39
Upf3bQ3ULL6 Mir5124a-201ENSMUST00000175528 72 ntBASIC0.14□□□□□ -2.39
Upf3bQ3ULL6 Gm23793-201ENSMUST00000179396 117 ntBASIC0.14□□□□□ -2.39
Upf3bQ3ULL6 Gm43624-201ENSMUST00000197368 180 ntBASIC0.14□□□□□ -2.39
Upf3bQ3ULL6 Gm44055-201ENSMUST00000204376 247 ntBASIC0.14□□□□□ -2.39
Upf3bQ3ULL6 Gm26495-201ENSMUST00000083152 137 ntBASIC0.14□□□□□ -2.39
Upf3bQ3ULL6 Gm25497-201ENSMUST00000104425 132 ntBASIC0.13□□□□□ -2.39
Upf3bQ3ULL6 Gm24833-201ENSMUST00000116775 120 ntBASIC0.13□□□□□ -2.39
Upf3bQ3ULL6 Gm15002-201ENSMUST00000118406 452 ntBASIC0.13□□□□□ -2.39
Upf3bQ3ULL6 Gm24594-201ENSMUST00000122502 99 ntBASIC0.13□□□□□ -2.39
Upf3bQ3ULL6 Mir3089-201ENSMUST00000175350 84 ntBASIC0.13□□□□□ -2.39
Upf3bQ3ULL6 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC0.13□□□□□ -2.39
Upf3bQ3ULL6 AC164297.5-201ENSMUST00000224365 198 ntBASIC0.13□□□□□ -2.39
Upf3bQ3ULL6 AC129085.1-201ENSMUST00000225263 165 ntBASIC0.13□□□□□ -2.39
Upf3bQ3ULL6 AC115735.2-201ENSMUST00000227135 351 ntBASIC0.13□□□□□ -2.39
Upf3bQ3ULL6 Mir30a-201ENSMUST00000083471 71 ntBASIC0.13□□□□□ -2.39
Upf3bQ3ULL6 Gm11834-201ENSMUST00000122257 585 ntBASIC0.12□□□□□ -2.39
Upf3bQ3ULL6 Gm23761-201ENSMUST00000158347 104 ntBASIC0.12□□□□□ -2.39
Upf3bQ3ULL6 Gm22239-201ENSMUST00000175220 103 ntBASIC0.12□□□□□ -2.39
Upf3bQ3ULL6 Mir3108-201ENSMUST00000175500 79 ntBASIC0.12□□□□□ -2.39
Upf3bQ3ULL6 Gm22114-201ENSMUST00000177756 107 ntBASIC0.12□□□□□ -2.39
Upf3bQ3ULL6 Mir3535-201ENSMUST00000197651 147 ntBASIC0.12□□□□□ -2.39
Upf3bQ3ULL6 Gm44057-201ENSMUST00000204547 96 ntBASIC0.12□□□□□ -2.39
Upf3bQ3ULL6 AC122769.2-201ENSMUST00000227248 302 ntBASIC0.12□□□□□ -2.39
Upf3bQ3ULL6 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC0.11□□□□□ -2.39
Upf3bQ3ULL6 Gm24629-201ENSMUST00000122762 89 ntBASIC0.11□□□□□ -2.39
Upf3bQ3ULL6 Gm25882-201ENSMUST00000157784 85 ntBASIC0.11□□□□□ -2.39
Upf3bQ3ULL6 Gm24467-201ENSMUST00000157887 126 ntBASIC0.11□□□□□ -2.39
Upf3bQ3ULL6 Scarna8-201ENSMUST00000158333 131 ntBASIC0.11□□□□□ -2.39
Upf3bQ3ULL6 Gm22887-201ENSMUST00000178586 107 ntBASIC0.11□□□□□ -2.39
Upf3bQ3ULL6 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC0.11□□□□□ -2.39
Upf3bQ3ULL6 Gm37763-201ENSMUST00000193445 120 ntBASIC0.11□□□□□ -2.39
Upf3bQ3ULL6 AC141438.3-201ENSMUST00000215632 202 ntBASIC0.11□□□□□ -2.39
Upf3bQ3ULL6 Gm26111-201ENSMUST00000083969 106 ntBASIC0.11□□□□□ -2.39
Upf3bQ3ULL6 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC0.1□□□□□ -2.39
Upf3bQ3ULL6 Gm42606-201ENSMUST00000114209 239 ntBASIC0.1□□□□□ -2.39
Upf3bQ3ULL6 Gm23779-201ENSMUST00000157938 64 ntBASIC0.1□□□□□ -2.39
Upf3bQ3ULL6 Gm22520-201ENSMUST00000158269 129 ntBASIC0.1□□□□□ -2.39
Upf3bQ3ULL6 Gm16307-201ENSMUST00000161269 210 ntBASIC0.1□□□□□ -2.39
Upf3bQ3ULL6 Mir6350-201ENSMUST00000183639 105 ntBASIC0.1□□□□□ -2.39
Upf3bQ3ULL6 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
Upf3bQ3ULL6 Gm19572-201ENSMUST00000214326 338 ntBASIC0.1□□□□□ -2.39
Upf3bQ3ULL6 CT010454.1-201ENSMUST00000225975 265 ntBASIC0.1□□□□□ -2.39
Upf3bQ3ULL6 Gm25814-201ENSMUST00000082754 107 ntBASIC0.1□□□□□ -2.39
Upf3bQ3ULL6 Gm22421-201ENSMUST00000083058 107 ntBASIC0.1□□□□□ -2.39
Upf3bQ3ULL6 Gm25110-201ENSMUST00000116684 121 ntBASIC0.09□□□□□ -2.4
Upf3bQ3ULL6 Gm25775-201ENSMUST00000116716 121 ntBASIC0.09□□□□□ -2.4
Upf3bQ3ULL6 Gm24795-201ENSMUST00000116737 121 ntBASIC0.09□□□□□ -2.4
Upf3bQ3ULL6 Gm25171-201ENSMUST00000116926 121 ntBASIC0.09□□□□□ -2.4
Upf3bQ3ULL6 Gm25300-201ENSMUST00000175284 84 ntBASIC0.09□□□□□ -2.4
Upf3bQ3ULL6 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC0.09□□□□□ -2.4
Upf3bQ3ULL6 Gm23404-201ENSMUST00000082543 97 ntBASIC0.09□□□□□ -2.4
Upf3bQ3ULL6 Gm14400-201ENSMUST00000117234 2135 ntBASIC0.08□□□□□ -2.4
Upf3bQ3ULL6 Gm14039-201ENSMUST00000118705 101 ntBASIC0.08□□□□□ -2.4
Upf3bQ3ULL6 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC0.08□□□□□ -2.4
Upf3bQ3ULL6 Gm23036-201ENSMUST00000157885 99 ntBASIC0.08□□□□□ -2.4
Upf3bQ3ULL6 Gm23763-201ENSMUST00000158345 60 ntBASIC0.08□□□□□ -2.4
Upf3bQ3ULL6 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC0.08□□□□□ -2.4
Upf3bQ3ULL6 Gm44149-201ENSMUST00000204256 226 ntBASIC0.08□□□□□ -2.4
Upf3bQ3ULL6 Gm22365-201ENSMUST00000093750 117 ntBASIC0.08□□□□□ -2.4
Upf3bQ3ULL6 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC0.08□□□□□ -2.4
Upf3bQ3ULL6 Mir547-201ENSMUST00000102051 78 ntBASIC0.07□□□□□ -2.4
Upf3bQ3ULL6 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC0.07□□□□□ -2.4
Upf3bQ3ULL6 Gm22048-201ENSMUST00000104721 89 ntBASIC0.07□□□□□ -2.4
Upf3bQ3ULL6 Gm23989-201ENSMUST00000117030 66 ntBASIC0.07□□□□□ -2.4
Upf3bQ3ULL6 Gm14671-201ENSMUST00000121790 262 ntBASIC0.07□□□□□ -2.4
Upf3bQ3ULL6 Gm25952-201ENSMUST00000175329 74 ntBASIC0.07□□□□□ -2.4
Upf3bQ3ULL6 Gm43563-201ENSMUST00000196761 198 ntBASIC0.07□□□□□ -2.4
Upf3bQ3ULL6 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC0.07□□□□□ -2.4
Upf3bQ3ULL6 Gm16186-201ENSMUST00000120132 216 ntBASIC0.06□□□□□ -2.4
Upf3bQ3ULL6 Gm25970-201ENSMUST00000157165 86 ntBASIC0.06□□□□□ -2.4
Upf3bQ3ULL6 Gm24549-201ENSMUST00000158647 139 ntBASIC0.06□□□□□ -2.4
Upf3bQ3ULL6 Gm44345-201ENSMUST00000199560 135 ntBASIC0.06□□□□□ -2.4
Upf3bQ3ULL6 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC0.06□□□□□ -2.4
Upf3bQ3ULL6 Gm25937-201ENSMUST00000083912 107 ntBASIC0.06□□□□□ -2.4
Upf3bQ3ULL6 Gm14307-201ENSMUST00000118930 291 ntBASIC0.05□□□□□ -2.4
Upf3bQ3ULL6 Gm14297-201ENSMUST00000129110 291 ntBASIC0.05□□□□□ -2.4
Upf3bQ3ULL6 Gm16362-201ENSMUST00000135189 214 ntBASIC0.05□□□□□ -2.4
Upf3bQ3ULL6 Gm23982-201ENSMUST00000157141 106 ntBASIC0.05□□□□□ -2.4
Upf3bQ3ULL6 Gm25982-201ENSMUST00000157920 101 ntBASIC0.05□□□□□ -2.4
Retrieved 100 of 76,532 protein–RNA pairs in 135.6 ms