Protein–RNA interactions for Protein: Q3U4B1

Ssbp4, Single stranded DNA binding protein 4, isoform CRA_b, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp4Q3U4B1 Gm25636-201ENSMUST00000082666 133 ntBASIC1.41□□□□□ -2.18
Ssbp4Q3U4B1 Gm24406-201ENSMUST00000083026 128 ntBASIC1.41□□□□□ -2.18
Ssbp4Q3U4B1 Gm25627-201ENSMUST00000084003 153 ntBASIC1.41□□□□□ -2.18
Ssbp4Q3U4B1 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC1.41□□□□□ -2.18
Ssbp4Q3U4B1 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
Ssbp4Q3U4B1 Gm14937-201ENSMUST00000119709 208 ntBASIC1.4□□□□□ -2.19
Ssbp4Q3U4B1 Gm25323-201ENSMUST00000122555 103 ntBASIC1.4□□□□□ -2.19
Ssbp4Q3U4B1 Gm23656-201ENSMUST00000122626 112 ntBASIC1.4□□□□□ -2.19
Ssbp4Q3U4B1 Gm24262-201ENSMUST00000157431 144 ntBASIC1.4□□□□□ -2.19
Ssbp4Q3U4B1 Mir1966-201ENSMUST00000158807 108 ntBASIC1.4□□□□□ -2.19
Ssbp4Q3U4B1 Gm22699-201ENSMUST00000175376 105 ntBASIC1.4□□□□□ -2.19
Ssbp4Q3U4B1 Gm28383-201ENSMUST00000187563 139 ntBASIC1.4□□□□□ -2.19
Ssbp4Q3U4B1 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.4□□□□□ -2.19
Ssbp4Q3U4B1 Gm44921-201ENSMUST00000205290 301 ntBASIC1.4□□□□□ -2.19
Ssbp4Q3U4B1 Gm24261-201ENSMUST00000083744 104 ntBASIC1.4□□□□□ -2.19
Ssbp4Q3U4B1 Mir488-201ENSMUST00000093595 109 ntBASIC1.4□□□□□ -2.19
Ssbp4Q3U4B1 Gm14917-201ENSMUST00000118872 2105 ntBASIC1.39□□□□□ -2.19
Ssbp4Q3U4B1 Mir1298-201ENSMUST00000116681 98 ntBASIC1.39□□□□□ -2.19
Ssbp4Q3U4B1 Gm28409-201ENSMUST00000187064 103 ntBASIC1.39□□□□□ -2.19
Ssbp4Q3U4B1 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
Ssbp4Q3U4B1 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
Ssbp4Q3U4B1 AC150901.1-201ENSMUST00000208407 145 ntBASIC1.39□□□□□ -2.19
Ssbp4Q3U4B1 CT030645.1-201ENSMUST00000224020 231 ntBASIC1.39□□□□□ -2.19
Ssbp4Q3U4B1 Mir34a-201ENSMUST00000083559 102 ntBASIC1.39□□□□□ -2.19
Ssbp4Q3U4B1 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC1.39□□□□□ -2.19
Ssbp4Q3U4B1 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
Ssbp4Q3U4B1 Gm25915-201ENSMUST00000104265 126 ntBASIC1.38□□□□□ -2.19
Ssbp4Q3U4B1 Gm14882-201ENSMUST00000117216 218 ntBASIC1.38□□□□□ -2.19
Ssbp4Q3U4B1 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
Ssbp4Q3U4B1 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC1.38□□□□□ -2.19
Ssbp4Q3U4B1 Gm25828-201ENSMUST00000157087 95 ntBASIC1.38□□□□□ -2.19
Ssbp4Q3U4B1 Gm22082-201ENSMUST00000157587 161 ntBASIC1.38□□□□□ -2.19
Ssbp4Q3U4B1 Gm25425-201ENSMUST00000157611 96 ntBASIC1.38□□□□□ -2.19
Ssbp4Q3U4B1 Gm22139-201ENSMUST00000158747 105 ntBASIC1.38□□□□□ -2.19
Ssbp4Q3U4B1 Gm26360-201ENSMUST00000158872 103 ntBASIC1.38□□□□□ -2.19
Ssbp4Q3U4B1 Gm37116-201ENSMUST00000195161 147 ntBASIC1.38□□□□□ -2.19
Ssbp4Q3U4B1 Gm44325-201ENSMUST00000196757 77 ntBASIC1.38□□□□□ -2.19
Ssbp4Q3U4B1 Gm9251-201ENSMUST00000197202 628 ntBASIC1.38□□□□□ -2.19
Ssbp4Q3U4B1 Gm42623-201ENSMUST00000197225 379 ntBASIC1.38□□□□□ -2.19
Ssbp4Q3U4B1 Mir3087-201ENSMUST00000199405 56 ntBASIC1.38□□□□□ -2.19
Ssbp4Q3U4B1 AC129085.1-201ENSMUST00000225263 165 ntBASIC1.38□□□□□ -2.19
Ssbp4Q3U4B1 Snora3-201ENSMUST00000083082 132 ntBASIC1.38□□□□□ -2.19
Ssbp4Q3U4B1 Gm25832-201ENSMUST00000104140 130 ntBASIC1.37□□□□□ -2.19
Ssbp4Q3U4B1 Snord100-201ENSMUST00000116836 74 ntBASIC1.37□□□□□ -2.19
Ssbp4Q3U4B1 Gm15069-201ENSMUST00000117792 192 ntBASIC1.37□□□□□ -2.19
Ssbp4Q3U4B1 Gm15068-201ENSMUST00000119796 192 ntBASIC1.37□□□□□ -2.19
Ssbp4Q3U4B1 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC1.37□□□□□ -2.19
Ssbp4Q3U4B1 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC1.37□□□□□ -2.19
Ssbp4Q3U4B1 Gm23898-201ENSMUST00000158111 103 ntBASIC1.37□□□□□ -2.19
Ssbp4Q3U4B1 Gm22386-201ENSMUST00000158192 129 ntBASIC1.37□□□□□ -2.19
Ssbp4Q3U4B1 Gm25071-201ENSMUST00000175232 70 ntBASIC1.37□□□□□ -2.19
Ssbp4Q3U4B1 Gm25035-201ENSMUST00000175414 77 ntBASIC1.37□□□□□ -2.19
Ssbp4Q3U4B1 Snord87-201ENSMUST00000175437 87 ntBASIC1.37□□□□□ -2.19
Ssbp4Q3U4B1 Gm28537-201ENSMUST00000189026 315 ntBASIC1.37□□□□□ -2.19
Ssbp4Q3U4B1 Gm29631-201ENSMUST00000191065 315 ntBASIC1.37□□□□□ -2.19
Ssbp4Q3U4B1 Gm18433-201ENSMUST00000192747 197 ntBASIC1.37□□□□□ -2.19
Ssbp4Q3U4B1 Gm26379-202ENSMUST00000200225 132 ntBASIC1.37□□□□□ -2.19
Ssbp4Q3U4B1 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC1.37□□□□□ -2.19
Ssbp4Q3U4B1 AC168062.3-201ENSMUST00000227025 165 ntBASIC1.37□□□□□ -2.19
Ssbp4Q3U4B1 Gm22306-201ENSMUST00000082692 107 ntBASIC1.37□□□□□ -2.19
Ssbp4Q3U4B1 Gm25697-201ENSMUST00000082902 98 ntBASIC1.37□□□□□ -2.19
Ssbp4Q3U4B1 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
Ssbp4Q3U4B1 Gm24171-201ENSMUST00000104126 131 ntBASIC1.36□□□□□ -2.19
Ssbp4Q3U4B1 Gm13246-201ENSMUST00000120994 315 ntBASIC1.36□□□□□ -2.19
Ssbp4Q3U4B1 Gm26181-201ENSMUST00000157687 106 ntBASIC1.36□□□□□ -2.19
Ssbp4Q3U4B1 Gm17490-201ENSMUST00000166779 63 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
Ssbp4Q3U4B1 Gm27672-201ENSMUST00000183751 204 ntBASIC1.36□□□□□ -2.19
Ssbp4Q3U4B1 Gm28669-201ENSMUST00000188400 100 ntBASIC1.36□□□□□ -2.19
Ssbp4Q3U4B1 Gm42988-201ENSMUST00000198116 225 ntBASIC1.36□□□□□ -2.19
Ssbp4Q3U4B1 Trav5-2-201ENSMUST00000199855 280 ntBASIC1.36□□□□□ -2.19
Ssbp4Q3U4B1 AC126691.1-201ENSMUST00000226534 202 ntBASIC1.36□□□□□ -2.19
Ssbp4Q3U4B1 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC1.36□□□□□ -2.19
Ssbp4Q3U4B1 Mir223-201ENSMUST00000102112 110 ntBASIC1.35□□□□□ -2.19
Ssbp4Q3U4B1 Gm14567-201ENSMUST00000117155 174 ntBASIC1.35□□□□□ -2.19
Ssbp4Q3U4B1 Gm25558-201ENSMUST00000158083 106 ntBASIC1.35□□□□□ -2.19
Ssbp4Q3U4B1 Gm22163-201ENSMUST00000158408 135 ntBASIC1.35□□□□□ -2.19
Ssbp4Q3U4B1 Mir1931-201ENSMUST00000158589 119 ntBASIC1.35□□□□□ -2.19
Ssbp4Q3U4B1 Gm23966-201ENSMUST00000179823 107 ntBASIC1.35□□□□□ -2.19
Ssbp4Q3U4B1 Gm27265-201ENSMUST00000183559 77 ntBASIC1.35□□□□□ -2.19
Ssbp4Q3U4B1 Gm29603-201ENSMUST00000186792 334 ntBASIC1.35□□□□□ -2.19
Ssbp4Q3U4B1 Ighv15-1-201ENSMUST00000194450 276 ntBASIC1.35□□□□□ -2.19
Ssbp4Q3U4B1 AC153646.2-201ENSMUST00000220516 109 ntBASIC1.35□□□□□ -2.19
Ssbp4Q3U4B1 AC151902.2-201ENSMUST00000226419 301 ntBASIC1.35□□□□□ -2.19
Ssbp4Q3U4B1 Gm22738-201ENSMUST00000083440 147 ntBASIC1.35□□□□□ -2.19
Ssbp4Q3U4B1 AC133934.2-201ENSMUST00000221729 4129 ntBASIC1.35□□□□□ -2.19
Ssbp4Q3U4B1 Gm25992-201ENSMUST00000102437 109 ntBASIC1.34□□□□□ -2.19
Ssbp4Q3U4B1 Gm24263-201ENSMUST00000104059 107 ntBASIC1.34□□□□□ -2.19
Ssbp4Q3U4B1 Gm23320-201ENSMUST00000104462 127 ntBASIC1.34□□□□□ -2.19
Ssbp4Q3U4B1 Gm25541-201ENSMUST00000116888 126 ntBASIC1.34□□□□□ -2.19
Ssbp4Q3U4B1 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.34□□□□□ -2.19
Ssbp4Q3U4B1 Gm23080-201ENSMUST00000157846 103 ntBASIC1.34□□□□□ -2.19
Ssbp4Q3U4B1 Gm22967-201ENSMUST00000157956 239 ntBASIC1.34□□□□□ -2.19
Ssbp4Q3U4B1 Gm22612-201ENSMUST00000158293 101 ntBASIC1.34□□□□□ -2.19
Ssbp4Q3U4B1 Mir6419-201ENSMUST00000184784 113 ntBASIC1.34□□□□□ -2.19
Ssbp4Q3U4B1 Gm43602-201ENSMUST00000196772 300 ntBASIC1.34□□□□□ -2.19
Ssbp4Q3U4B1 Gm44338-201ENSMUST00000198614 110 ntBASIC1.34□□□□□ -2.19
Ssbp4Q3U4B1 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
Ssbp4Q3U4B1 Gm26049-201ENSMUST00000157313 108 ntBASIC1.33□□□□□ -2.2
Ssbp4Q3U4B1 Gm24054-201ENSMUST00000158619 105 ntBASIC1.33□□□□□ -2.2
Ssbp4Q3U4B1 Gm17020-201ENSMUST00000172274 274 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 159.3 ms