Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm23182-201ENSMUST00000158688 135 ntBASIC1.55□□□□□ -2.16
NcanP55066 Gm25834-201ENSMUST00000158916 101 ntBASIC1.55□□□□□ -2.16
NcanP55066 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC1.55□□□□□ -2.16
NcanP55066 Mir6481-201ENSMUST00000184617 110 ntBASIC1.55□□□□□ -2.16
NcanP55066 Gm29014-201ENSMUST00000191422 326 ntBASIC1.55□□□□□ -2.16
NcanP55066 Gm45002-201ENSMUST00000208045 120 ntBASIC1.55□□□□□ -2.16
NcanP55066 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC1.55□□□□□ -2.16
NcanP55066 Gm5010-201ENSMUST00000213131 260 ntBASIC1.55□□□□□ -2.16
NcanP55066 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC1.55□□□□□ -2.16
NcanP55066 Gm22421-201ENSMUST00000083058 107 ntBASIC1.55□□□□□ -2.16
NcanP55066 Snora3-201ENSMUST00000083082 132 ntBASIC1.55□□□□□ -2.16
NcanP55066 Gm24453-201ENSMUST00000083346 76 ntBASIC1.55□□□□□ -2.16
NcanP55066 Gm24668-201ENSMUST00000158935 104 ntBASIC1.54□□□□□ -2.16
NcanP55066 Gm29308-201ENSMUST00000188863 315 ntBASIC1.54□□□□□ -2.16
NcanP55066 AC211878.4-201ENSMUST00000220970 262 ntBASIC1.54□□□□□ -2.16
NcanP55066 Gm16976-205ENSMUST00000227324 226 ntBASIC1.54□□□□□ -2.16
NcanP55066 Gm24805-201ENSMUST00000082931 104 ntBASIC1.54□□□□□ -2.16
NcanP55066 Mir155-201ENSMUST00000083463 65 ntBASIC1.54□□□□□ -2.16
NcanP55066 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.54□□□□□ -2.16
NcanP55066 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
NcanP55066 Gm25424-201ENSMUST00000157612 58 ntBASIC1.53□□□□□ -2.16
NcanP55066 Gm26482-201ENSMUST00000158015 62 ntBASIC1.53□□□□□ -2.16
NcanP55066 Gm23893-201ENSMUST00000158106 134 ntBASIC1.53□□□□□ -2.16
NcanP55066 Gm22431-201ENSMUST00000158545 107 ntBASIC1.53□□□□□ -2.16
NcanP55066 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
NcanP55066 Mir6419-201ENSMUST00000184784 113 ntBASIC1.53□□□□□ -2.16
NcanP55066 AC160863.1-201ENSMUST00000218412 317 ntBASIC1.53□□□□□ -2.16
NcanP55066 AC126691.1-201ENSMUST00000226534 202 ntBASIC1.53□□□□□ -2.16
NcanP55066 AC101945.1-201ENSMUST00000226734 466 ntBASIC1.53□□□□□ -2.16
NcanP55066 AC154213.2-201ENSMUST00000227138 187 ntBASIC1.53□□□□□ -2.16
NcanP55066 Gm23461-201ENSMUST00000083265 107 ntBASIC1.53□□□□□ -2.16
NcanP55066 Mir146-201ENSMUST00000083667 65 ntBASIC1.53□□□□□ -2.16
NcanP55066 Gm25759-201ENSMUST00000103988 129 ntBASIC1.52□□□□□ -2.17
NcanP55066 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC1.52□□□□□ -2.17
NcanP55066 Gm34139-201ENSMUST00000196166 294 ntBASIC1.52□□□□□ -2.17
NcanP55066 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC1.52□□□□□ -2.17
NcanP55066 Gm23100-201ENSMUST00000083455 141 ntBASIC1.52□□□□□ -2.17
NcanP55066 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
NcanP55066 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC1.51□□□□□ -2.17
NcanP55066 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
NcanP55066 Gm23101-201ENSMUST00000157550 137 ntBASIC1.51□□□□□ -2.17
NcanP55066 Gm23584-201ENSMUST00000157655 129 ntBASIC1.51□□□□□ -2.17
NcanP55066 Gm22386-201ENSMUST00000158192 129 ntBASIC1.51□□□□□ -2.17
NcanP55066 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC1.51□□□□□ -2.17
NcanP55066 Snora24-201ENSMUST00000174989 130 ntBASIC1.51□□□□□ -2.17
NcanP55066 Gm23571-201ENSMUST00000180073 127 ntBASIC1.51□□□□□ -2.17
NcanP55066 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC1.51□□□□□ -2.17
NcanP55066 7330423F06Rik-201ENSMUST00000197499 301 ntBASIC1.51□□□□□ -2.17
NcanP55066 Gm6105-201ENSMUST00000200580 624 ntBASIC1.51□□□□□ -2.17
NcanP55066 Gm25357-201ENSMUST00000082745 72 ntBASIC1.51□□□□□ -2.17
NcanP55066 Gm24038-201ENSMUST00000082872 159 ntBASIC1.51□□□□□ -2.17
NcanP55066 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
NcanP55066 Gm14674-201ENSMUST00000117816 342 ntBASIC1.5□□□□□ -2.17
NcanP55066 Gm13797-201ENSMUST00000121792 120 ntBASIC1.5□□□□□ -2.17
NcanP55066 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC1.5□□□□□ -2.17
NcanP55066 Gm23194-201ENSMUST00000158813 105 ntBASIC1.5□□□□□ -2.17
NcanP55066 Mir3057-201ENSMUST00000175040 91 ntBASIC1.5□□□□□ -2.17
NcanP55066 Gm25935-201ENSMUST00000178746 107 ntBASIC1.5□□□□□ -2.17
NcanP55066 Gm25730-201ENSMUST00000178753 165 ntBASIC1.5□□□□□ -2.17
NcanP55066 Mir7241-201ENSMUST00000184532 64 ntBASIC1.5□□□□□ -2.17
NcanP55066 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
NcanP55066 Gm19855-201ENSMUST00000210145 249 ntBASIC1.5□□□□□ -2.17
NcanP55066 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
NcanP55066 Gm25634-201ENSMUST00000082667 105 ntBASIC1.5□□□□□ -2.17
NcanP55066 Mir384-201ENSMUST00000083565 88 ntBASIC1.5□□□□□ -2.17
NcanP55066 Gm24762-201ENSMUST00000083689 104 ntBASIC1.5□□□□□ -2.17
NcanP55066 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
NcanP55066 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
NcanP55066 Mir466p-201ENSMUST00000103925 89 ntBASIC1.49□□□□□ -2.17
NcanP55066 Snord72-201ENSMUST00000104549 81 ntBASIC1.49□□□□□ -2.17
NcanP55066 Gm12449-201ENSMUST00000117572 234 ntBASIC1.49□□□□□ -2.17
NcanP55066 Gm15214-201ENSMUST00000122155 470 ntBASIC1.49□□□□□ -2.17
NcanP55066 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC1.49□□□□□ -2.17
NcanP55066 Gm27977-201ENSMUST00000185159 111 ntBASIC1.49□□□□□ -2.17
NcanP55066 Gm28537-201ENSMUST00000189026 315 ntBASIC1.49□□□□□ -2.17
NcanP55066 Gm29631-201ENSMUST00000191065 315 ntBASIC1.49□□□□□ -2.17
NcanP55066 Gm8219-201ENSMUST00000218309 242 ntBASIC1.49□□□□□ -2.17
NcanP55066 AC098718.1-201ENSMUST00000226166 175 ntBASIC1.49□□□□□ -2.17
NcanP55066 AC122320.1-201ENSMUST00000227233 105 ntBASIC1.49□□□□□ -2.17
NcanP55066 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
NcanP55066 Gm24595-201ENSMUST00000122501 110 ntBASIC1.48□□□□□ -2.17
NcanP55066 Gm23718-201ENSMUST00000157350 307 ntBASIC1.48□□□□□ -2.17
NcanP55066 Gm25633-201ENSMUST00000178565 107 ntBASIC1.48□□□□□ -2.17
NcanP55066 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
NcanP55066 CT010449.1-201ENSMUST00000220624 153 ntBASIC1.48□□□□□ -2.17
NcanP55066 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC1.48□□□□□ -2.17
NcanP55066 Gm26204-201ENSMUST00000082906 107 ntBASIC1.48□□□□□ -2.17
NcanP55066 Gm26207-201ENSMUST00000082909 104 ntBASIC1.48□□□□□ -2.17
NcanP55066 Mir471-201ENSMUST00000093596 67 ntBASIC1.48□□□□□ -2.17
NcanP55066 Gm24132-201ENSMUST00000104745 91 ntBASIC1.47□□□□□ -2.17
NcanP55066 Gm24683-201ENSMUST00000104840 88 ntBASIC1.47□□□□□ -2.17
NcanP55066 Gm13801-201ENSMUST00000120750 160 ntBASIC1.47□□□□□ -2.17
NcanP55066 Gm6025-201ENSMUST00000121517 201 ntBASIC1.47□□□□□ -2.17
NcanP55066 Gm22279-201ENSMUST00000157200 93 ntBASIC1.47□□□□□ -2.17
NcanP55066 Gm23020-201ENSMUST00000158766 253 ntBASIC1.47□□□□□ -2.17
NcanP55066 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
NcanP55066 Gm45116-201ENSMUST00000207392 275 ntBASIC1.47□□□□□ -2.17
NcanP55066 Gm25142-201ENSMUST00000082698 107 ntBASIC1.47□□□□□ -2.17
NcanP55066 Snord47-201ENSMUST00000083034 77 ntBASIC1.47□□□□□ -2.17
NcanP55066 Mir223-201ENSMUST00000102112 110 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms