Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm23130-201ENSMUST00000104252 74 ntBASIC1.06□□□□□ -2.24
Traf1P39428 Gm11322-201ENSMUST00000118095 435 ntBASIC1.06□□□□□ -2.24
Traf1P39428 n-R5s73-201ENSMUST00000122508 107 ntBASIC1.06□□□□□ -2.24
Traf1P39428 Gm25949-201ENSMUST00000175333 114 ntBASIC1.06□□□□□ -2.24
Traf1P39428 Gm22565-201ENSMUST00000175540 69 ntBASIC1.06□□□□□ -2.24
Traf1P39428 Gm43898-201ENSMUST00000204456 424 ntBASIC1.06□□□□□ -2.24
Traf1P39428 Gm37824-201ENSMUST00000193430 3236 ntBASIC1.06□□□□□ -2.24
Traf1P39428 Mir669o-201ENSMUST00000103898 96 ntBASIC1.05□□□□□ -2.24
Traf1P39428 Gm24000-201ENSMUST00000158063 89 ntBASIC1.05□□□□□ -2.24
Traf1P39428 Gm23579-201ENSMUST00000158528 103 ntBASIC1.05□□□□□ -2.24
Traf1P39428 Gm27365-201ENSMUST00000184041 177 ntBASIC1.05□□□□□ -2.24
Traf1P39428 Gm27747-201ENSMUST00000184707 85 ntBASIC1.05□□□□□ -2.24
Traf1P39428 Gm28669-201ENSMUST00000188400 100 ntBASIC1.05□□□□□ -2.24
Traf1P39428 Gm24311-201ENSMUST00000082570 104 ntBASIC1.05□□□□□ -2.24
Traf1P39428 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC1.05□□□□□ -2.24
Traf1P39428 Gm24271-201ENSMUST00000102327 111 ntBASIC1.04□□□□□ -2.24
Traf1P39428 Mir654-201ENSMUST00000104787 84 ntBASIC1.04□□□□□ -2.24
Traf1P39428 Mir669i-201ENSMUST00000117007 127 ntBASIC1.04□□□□□ -2.24
Traf1P39428 Mir6394-201ENSMUST00000184738 99 ntBASIC1.04□□□□□ -2.24
Traf1P39428 Gm20923-201ENSMUST00000190009 319 ntBASIC1.04□□□□□ -2.24
Traf1P39428 Gm44373-201ENSMUST00000196112 169 ntBASIC1.04□□□□□ -2.24
Traf1P39428 Gm44055-201ENSMUST00000204376 247 ntBASIC1.04□□□□□ -2.24
Traf1P39428 AC160984.1-201ENSMUST00000225855 3154 ntBASIC1.03□□□□□ -2.24
Traf1P39428 Gm25111-201ENSMUST00000116686 147 ntBASIC1.03□□□□□ -2.24
Traf1P39428 Gm24392-201ENSMUST00000158136 103 ntBASIC1.03□□□□□ -2.24
Traf1P39428 Gm25838-201ENSMUST00000158920 120 ntBASIC1.03□□□□□ -2.24
Traf1P39428 Gm24667-201ENSMUST00000158938 103 ntBASIC1.03□□□□□ -2.24
Traf1P39428 Gm44977-201ENSMUST00000205283 420 ntBASIC1.03□□□□□ -2.24
Traf1P39428 Mir324-201ENSMUST00000083600 89 ntBASIC1.03□□□□□ -2.24
Traf1P39428 Gm24423-201ENSMUST00000101982 106 ntBASIC1.02□□□□□ -2.25
Traf1P39428 Gm26402-201ENSMUST00000158499 113 ntBASIC1.02□□□□□ -2.25
Traf1P39428 Gm22200-201ENSMUST00000158614 67 ntBASIC1.02□□□□□ -2.25
Traf1P39428 Gm27905-201ENSMUST00000184005 207 ntBASIC1.02□□□□□ -2.25
Traf1P39428 Mir3970-201ENSMUST00000199287 90 ntBASIC1.02□□□□□ -2.25
Traf1P39428 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
Traf1P39428 Gm12797-201ENSMUST00000118645 273 ntBASIC1.01□□□□□ -2.25
Traf1P39428 Gm25424-201ENSMUST00000157612 58 ntBASIC1.01□□□□□ -2.25
Traf1P39428 Gm23003-201ENSMUST00000179948 107 ntBASIC1.01□□□□□ -2.25
Traf1P39428 Gm42533-201ENSMUST00000196247 157 ntBASIC1.01□□□□□ -2.25
Traf1P39428 Gm42506-201ENSMUST00000202009 150 ntBASIC1.01□□□□□ -2.25
Traf1P39428 Gm18213-201ENSMUST00000207850 178 ntBASIC1.01□□□□□ -2.25
Traf1P39428 Gm44563-201ENSMUST00000207958 178 ntBASIC1.01□□□□□ -2.25
Traf1P39428 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC1.01□□□□□ -2.25
Traf1P39428 AC116460.1-201ENSMUST00000219040 313 ntBASIC1.01□□□□□ -2.25
Traf1P39428 AC129085.1-201ENSMUST00000225263 165 ntBASIC1.01□□□□□ -2.25
Traf1P39428 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
Traf1P39428 Gm22101-201ENSMUST00000157928 103 ntBASIC1□□□□□ -2.25
Traf1P39428 Gm20386-201ENSMUST00000174010 132 ntBASIC1□□□□□ -2.25
Traf1P39428 Gm44326-201ENSMUST00000198226 101 ntBASIC1□□□□□ -2.25
Traf1P39428 Gm36189-201ENSMUST00000204113 523 ntBASIC1□□□□□ -2.25
Traf1P39428 Gm45471-201ENSMUST00000211270 281 ntBASIC1□□□□□ -2.25
Traf1P39428 Gm10730-201ENSMUST00000194097 2723 ntBASIC0.99□□□□□ -2.25
Traf1P39428 Gm23584-201ENSMUST00000157655 129 ntBASIC0.99□□□□□ -2.25
Traf1P39428 Gm25235-201ENSMUST00000179933 107 ntBASIC0.99□□□□□ -2.25
Traf1P39428 Gm27587-201ENSMUST00000185116 163 ntBASIC0.99□□□□□ -2.25
Traf1P39428 Gm29490-201ENSMUST00000190923 342 ntBASIC0.99□□□□□ -2.25
Traf1P39428 Gm42988-201ENSMUST00000198116 225 ntBASIC0.99□□□□□ -2.25
Traf1P39428 Gm22287-201ENSMUST00000083197 107 ntBASIC0.99□□□□□ -2.25
Traf1P39428 AC158598.2-201ENSMUST00000213397 3832 ntBASIC0.98□□□□□ -2.25
Traf1P39428 Gm22544-201ENSMUST00000104349 127 ntBASIC0.98□□□□□ -2.25
Traf1P39428 Gm12837-201ENSMUST00000120131 373 ntBASIC0.98□□□□□ -2.25
Traf1P39428 Gm22163-201ENSMUST00000158408 135 ntBASIC0.98□□□□□ -2.25
Traf1P39428 Gm24345-201ENSMUST00000158706 124 ntBASIC0.98□□□□□ -2.25
Traf1P39428 Gm25166-201ENSMUST00000158909 111 ntBASIC0.98□□□□□ -2.25
Traf1P39428 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC0.98□□□□□ -2.25
Traf1P39428 Gm28256-201ENSMUST00000188953 139 ntBASIC0.98□□□□□ -2.25
Traf1P39428 Gm28559-201ENSMUST00000190532 139 ntBASIC0.98□□□□□ -2.25
Traf1P39428 Gm38323-201ENSMUST00000192450 210 ntBASIC0.98□□□□□ -2.25
Traf1P39428 Mir468-201ENSMUST00000197332 78 ntBASIC0.98□□□□□ -2.25
Traf1P39428 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
Traf1P39428 Gm22283-201ENSMUST00000082556 161 ntBASIC0.98□□□□□ -2.25
Traf1P39428 Gm14671-201ENSMUST00000121790 262 ntBASIC0.97□□□□□ -2.25
Traf1P39428 Gm26482-201ENSMUST00000158015 62 ntBASIC0.97□□□□□ -2.25
Traf1P39428 Gm23219-201ENSMUST00000158123 87 ntBASIC0.97□□□□□ -2.25
Traf1P39428 Gm23581-201ENSMUST00000158531 63 ntBASIC0.97□□□□□ -2.25
Traf1P39428 Gm24634-201ENSMUST00000158672 107 ntBASIC0.97□□□□□ -2.25
Traf1P39428 Mir7039-201ENSMUST00000183852 85 ntBASIC0.97□□□□□ -2.25
Traf1P39428 Gm38113-201ENSMUST00000193704 201 ntBASIC0.97□□□□□ -2.25
Traf1P39428 Gm44458-201ENSMUST00000196594 143 ntBASIC0.97□□□□□ -2.25
Traf1P39428 AC165092.3-201ENSMUST00000223602 282 ntBASIC0.97□□□□□ -2.25
Traf1P39428 AC154245.1-201ENSMUST00000224615 601 ntBASIC0.97□□□□□ -2.25
Traf1P39428 Gm25142-201ENSMUST00000082698 107 ntBASIC0.97□□□□□ -2.25
Traf1P39428 Gm22809-201ENSMUST00000082743 156 ntBASIC0.97□□□□□ -2.25
Traf1P39428 Gm14001-201ENSMUST00000118847 247 ntBASIC0.96□□□□□ -2.26
Traf1P39428 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC0.96□□□□□ -2.26
Traf1P39428 Gm24006-201ENSMUST00000158462 132 ntBASIC0.96□□□□□ -2.26
Traf1P39428 Gm24880-201ENSMUST00000158776 85 ntBASIC0.96□□□□□ -2.26
Traf1P39428 Mir6350-201ENSMUST00000183639 105 ntBASIC0.96□□□□□ -2.26
Traf1P39428 Mir6985-201ENSMUST00000184641 61 ntBASIC0.96□□□□□ -2.26
Traf1P39428 Gm23451-201ENSMUST00000083328 122 ntBASIC0.96□□□□□ -2.26
Traf1P39428 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.96□□□□□ -2.26
Traf1P39428 Mir1961-201ENSMUST00000158643 112 ntBASIC0.95□□□□□ -2.26
Traf1P39428 Gm25643-201ENSMUST00000158874 103 ntBASIC0.95□□□□□ -2.26
Traf1P39428 Gm37889-201ENSMUST00000194174 251 ntBASIC0.95□□□□□ -2.26
Traf1P39428 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC0.95□□□□□ -2.26
Traf1P39428 Mir19b-2-201ENSMUST00000083539 84 ntBASIC0.95□□□□□ -2.26
Traf1P39428 Mir10b-201ENSMUST00000083566 68 ntBASIC0.95□□□□□ -2.26
Traf1P39428 Gm14792-201ENSMUST00000119725 258 ntBASIC0.94□□□□□ -2.26
Traf1P39428 Snora24-201ENSMUST00000174989 130 ntBASIC0.94□□□□□ -2.26
Traf1P39428 Gm26073-201ENSMUST00000179906 127 ntBASIC0.94□□□□□ -2.26
Retrieved 100 of 76,532 protein–RNA pairs in 155.3 ms