Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gm25528-201ENSMUST00000180264 132 ntBASIC2.81□□□□□ -1.96
RaraP11416 Gm27379-201ENSMUST00000183730 123 ntBASIC2.81□□□□□ -1.96
RaraP11416 Gm44325-201ENSMUST00000196757 77 ntBASIC2.81□□□□□ -1.96
RaraP11416 mt-Ts2-201ENSMUST00000082416 59 ntBASIC2.81□□□□□ -1.96
RaraP11416 Gm37928-201ENSMUST00000193265 4131 ntBASIC2.81□□□□□ -1.96
RaraP11416 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
RaraP11416 AC153966.1-201ENSMUST00000220106 3764 ntBASIC2.81□□□□□ -1.96
RaraP11416 Olfr592-202ENSMUST00000106893 6566 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
RaraP11416 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
RaraP11416 Gm26076-201ENSMUST00000104065 105 ntBASIC2.8□□□□□ -1.96
RaraP11416 Gm22674-201ENSMUST00000104413 131 ntBASIC2.8□□□□□ -1.96
RaraP11416 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC2.8□□□□□ -1.96
RaraP11416 Gm23390-201ENSMUST00000157393 106 ntBASIC2.8□□□□□ -1.96
RaraP11416 Gm28647-201ENSMUST00000188416 197 ntBASIC2.8□□□□□ -1.96
RaraP11416 Snord7-201ENSMUST00000083781 97 ntBASIC2.8□□□□□ -1.96
RaraP11416 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
RaraP11416 Mir92-1-201ENSMUST00000102108 80 ntBASIC2.79□□□□□ -1.96
RaraP11416 Snora36b-201ENSMUST00000104383 132 ntBASIC2.79□□□□□ -1.96
RaraP11416 Gm26345-201ENSMUST00000157534 120 ntBASIC2.79□□□□□ -1.96
RaraP11416 Gm24291-201ENSMUST00000157633 162 ntBASIC2.79□□□□□ -1.96
RaraP11416 Trav5d-3-201ENSMUST00000170041 270 ntBASIC2.79□□□□□ -1.96
RaraP11416 Gm22638-201ENSMUST00000179674 107 ntBASIC2.79□□□□□ -1.96
RaraP11416 Gm37807-201ENSMUST00000194310 190 ntBASIC2.79□□□□□ -1.96
RaraP11416 Gm25820-201ENSMUST00000198589 127 ntBASIC2.79□□□□□ -1.96
RaraP11416 Gm42960-201ENSMUST00000202160 241 ntBASIC2.79□□□□□ -1.96
RaraP11416 Gm45544-201ENSMUST00000211130 88 ntBASIC2.79□□□□□ -1.96
RaraP11416 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC2.79□□□□□ -1.96
RaraP11416 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
RaraP11416 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
RaraP11416 Gm23854-201ENSMUST00000158378 108 ntBASIC2.78□□□□□ -1.96
RaraP11416 Mir6376-201ENSMUST00000185149 131 ntBASIC2.78□□□□□ -1.96
RaraP11416 Mir3961-201ENSMUST00000198795 59 ntBASIC2.78□□□□□ -1.96
RaraP11416 Mir9-1-201ENSMUST00000199907 89 ntBASIC2.78□□□□□ -1.96
RaraP11416 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC2.78□□□□□ -1.96
RaraP11416 AC124687.1-201ENSMUST00000221868 189 ntBASIC2.78□□□□□ -1.96
RaraP11416 Gm19118-201ENSMUST00000222554 98 ntBASIC2.78□□□□□ -1.96
RaraP11416 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
RaraP11416 Gm25357-201ENSMUST00000082745 72 ntBASIC2.78□□□□□ -1.96
RaraP11416 Gm25697-201ENSMUST00000082902 98 ntBASIC2.78□□□□□ -1.96
RaraP11416 Gm25628-201ENSMUST00000084002 105 ntBASIC2.78□□□□□ -1.96
RaraP11416 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC2.78□□□□□ -1.96
RaraP11416 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
RaraP11416 Gm23128-201ENSMUST00000104257 132 ntBASIC2.77□□□□□ -1.97
RaraP11416 Gm25526-201ENSMUST00000104332 132 ntBASIC2.77□□□□□ -1.97
RaraP11416 Gm22033-201ENSMUST00000116947 90 ntBASIC2.77□□□□□ -1.97
RaraP11416 Gm14947-201ENSMUST00000133704 303 ntBASIC2.77□□□□□ -1.97
RaraP11416 Gm22666-201ENSMUST00000158717 164 ntBASIC2.77□□□□□ -1.97
RaraP11416 Mir3083-201ENSMUST00000175377 64 ntBASIC2.77□□□□□ -1.97
RaraP11416 Gm23128-202ENSMUST00000196578 133 ntBASIC2.77□□□□□ -1.97
RaraP11416 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
RaraP11416 Igkv4-60-201ENSMUST00000200639 358 ntBASIC2.77□□□□□ -1.97
RaraP11416 Gm22283-201ENSMUST00000082556 161 ntBASIC2.77□□□□□ -1.97
RaraP11416 Gm42635-201ENSMUST00000200266 2571 ntBASIC2.77□□□□□ -1.97
RaraP11416 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.76□□□□□ -1.97
RaraP11416 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
RaraP11416 Gm22772-201ENSMUST00000104451 121 ntBASIC2.76□□□□□ -1.97
RaraP11416 Gm14674-201ENSMUST00000117816 342 ntBASIC2.76□□□□□ -1.97
RaraP11416 Gm26253-201ENSMUST00000122493 103 ntBASIC2.76□□□□□ -1.97
RaraP11416 Gm24475-201ENSMUST00000157435 143 ntBASIC2.76□□□□□ -1.97
RaraP11416 Gm22332-201ENSMUST00000158072 126 ntBASIC2.76□□□□□ -1.97
RaraP11416 Gm16584-201ENSMUST00000159267 189 ntBASIC2.76□□□□□ -1.97
RaraP11416 Gm43206-201ENSMUST00000197990 114 ntBASIC2.76□□□□□ -1.97
RaraP11416 Gm34314-201ENSMUST00000203622 367 ntBASIC2.76□□□□□ -1.97
RaraP11416 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC2.76□□□□□ -1.97
RaraP11416 Gm25851-201ENSMUST00000082794 107 ntBASIC2.76□□□□□ -1.97
RaraP11416 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
RaraP11416 Snord78-201ENSMUST00000104032 66 ntBASIC2.75□□□□□ -1.97
RaraP11416 n-R5s73-201ENSMUST00000122508 107 ntBASIC2.75□□□□□ -1.97
RaraP11416 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC2.75□□□□□ -1.97
RaraP11416 Gm26215-201ENSMUST00000158584 139 ntBASIC2.75□□□□□ -1.97
RaraP11416 Gm24345-201ENSMUST00000158706 124 ntBASIC2.75□□□□□ -1.97
RaraP11416 Gm20718-201ENSMUST00000176058 259 ntBASIC2.75□□□□□ -1.97
RaraP11416 Mir6377-201ENSMUST00000183760 114 ntBASIC2.75□□□□□ -1.97
RaraP11416 Gm29658-201ENSMUST00000185404 230 ntBASIC2.75□□□□□ -1.97
RaraP11416 Gm43626-201ENSMUST00000198575 162 ntBASIC2.75□□□□□ -1.97
RaraP11416 Gm19855-201ENSMUST00000210145 249 ntBASIC2.75□□□□□ -1.97
RaraP11416 CT571266.1-201ENSMUST00000222859 153 ntBASIC2.75□□□□□ -1.97
RaraP11416 Gm23249-201ENSMUST00000083369 161 ntBASIC2.75□□□□□ -1.97
RaraP11416 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
RaraP11416 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
RaraP11416 Gm43032-201ENSMUST00000197967 3123 ntBASIC2.75□□□□□ -1.97
RaraP11416 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
RaraP11416 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
RaraP11416 Gm22149-201ENSMUST00000104442 136 ntBASIC2.74□□□□□ -1.97
RaraP11416 Gm25289-201ENSMUST00000122799 119 ntBASIC2.74□□□□□ -1.97
RaraP11416 AC124537.1-201ENSMUST00000222890 159 ntBASIC2.74□□□□□ -1.97
RaraP11416 Gm25199-201ENSMUST00000083095 104 ntBASIC2.74□□□□□ -1.97
RaraP11416 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
RaraP11416 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.74□□□□□ -1.97
RaraP11416 CT009504.1-201ENSMUST00000218252 3330 ntBASIC2.73□□□□□ -1.97
RaraP11416 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.73□□□□□ -1.97
RaraP11416 Gm11792-201ENSMUST00000120640 168 ntBASIC2.73□□□□□ -1.97
RaraP11416 n-R5s15-201ENSMUST00000122635 111 ntBASIC2.73□□□□□ -1.97
RaraP11416 Gm23268-201ENSMUST00000175494 78 ntBASIC2.73□□□□□ -1.97
RaraP11416 AC174457.1-201ENSMUST00000215932 226 ntBASIC2.73□□□□□ -1.97
RaraP11416 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
RaraP11416 Gm42801-201ENSMUST00000202562 2865 ntBASIC2.73□□□□□ -1.97
RaraP11416 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
RaraP11416 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
RaraP11416 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 215.3 ms