Protein–RNA interactions for Protein: O55187

Cbx4, E3 SUMO-protein ligase CBX4, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx4O55187 Gm28383-201ENSMUST00000187563 139 ntBASIC1.59□□□□□ -2.15
Cbx4O55187 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.59□□□□□ -2.15
Cbx4O55187 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.16
Cbx4O55187 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
Cbx4O55187 Gm22148-201ENSMUST00000104445 107 ntBASIC1.58□□□□□ -2.16
Cbx4O55187 Gm26181-201ENSMUST00000157687 106 ntBASIC1.58□□□□□ -2.16
Cbx4O55187 Gm25558-201ENSMUST00000158083 106 ntBASIC1.58□□□□□ -2.16
Cbx4O55187 Gm26097-201ENSMUST00000179642 93 ntBASIC1.58□□□□□ -2.16
Cbx4O55187 Mir7009-201ENSMUST00000184519 64 ntBASIC1.58□□□□□ -2.16
Cbx4O55187 Gm24171-201ENSMUST00000104126 131 ntBASIC1.57□□□□□ -2.16
Cbx4O55187 Mir873a-201ENSMUST00000104863 77 ntBASIC1.57□□□□□ -2.16
Cbx4O55187 Gm22888-201ENSMUST00000158640 77 ntBASIC1.57□□□□□ -2.16
Cbx4O55187 Mir21b-201ENSMUST00000184317 108 ntBASIC1.57□□□□□ -2.16
Cbx4O55187 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
Cbx4O55187 Gm45754-201ENSMUST00000212380 279 ntBASIC1.57□□□□□ -2.16
Cbx4O55187 Gm24805-201ENSMUST00000082931 104 ntBASIC1.57□□□□□ -2.16
Cbx4O55187 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
Cbx4O55187 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC1.56□□□□□ -2.16
Cbx4O55187 Gm15069-201ENSMUST00000117792 192 ntBASIC1.56□□□□□ -2.16
Cbx4O55187 Gm15068-201ENSMUST00000119796 192 ntBASIC1.56□□□□□ -2.16
Cbx4O55187 Gm26415-201ENSMUST00000157673 292 ntBASIC1.56□□□□□ -2.16
Cbx4O55187 Gm24638-201ENSMUST00000179807 132 ntBASIC1.56□□□□□ -2.16
Cbx4O55187 Gm27248-201ENSMUST00000184004 166 ntBASIC1.56□□□□□ -2.16
Cbx4O55187 Gm18433-201ENSMUST00000192747 197 ntBASIC1.56□□□□□ -2.16
Cbx4O55187 Gm42623-201ENSMUST00000197225 379 ntBASIC1.56□□□□□ -2.16
Cbx4O55187 Gm42855-201ENSMUST00000197388 253 ntBASIC1.56□□□□□ -2.16
Cbx4O55187 Gm44408-201ENSMUST00000200205 66 ntBASIC1.56□□□□□ -2.16
Cbx4O55187 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.56□□□□□ -2.16
Cbx4O55187 Mir488-201ENSMUST00000093595 109 ntBASIC1.56□□□□□ -2.16
Cbx4O55187 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
Cbx4O55187 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
Cbx4O55187 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
Cbx4O55187 Gm25938-201ENSMUST00000104139 166 ntBASIC1.55□□□□□ -2.16
Cbx4O55187 Snord100-201ENSMUST00000116836 74 ntBASIC1.55□□□□□ -2.16
Cbx4O55187 Gm24559-201ENSMUST00000157519 121 ntBASIC1.55□□□□□ -2.16
Cbx4O55187 Gm22556-201ENSMUST00000157803 100 ntBASIC1.55□□□□□ -2.16
Cbx4O55187 Gm22606-201ENSMUST00000158290 103 ntBASIC1.55□□□□□ -2.16
Cbx4O55187 Gm22163-201ENSMUST00000158408 135 ntBASIC1.55□□□□□ -2.16
Cbx4O55187 Gm26403-201ENSMUST00000158500 105 ntBASIC1.55□□□□□ -2.16
Cbx4O55187 Gm25716-201ENSMUST00000158628 104 ntBASIC1.55□□□□□ -2.16
Cbx4O55187 Gm26360-201ENSMUST00000158872 103 ntBASIC1.55□□□□□ -2.16
Cbx4O55187 Mir3471-1-201ENSMUST00000175139 131 ntBASIC1.55□□□□□ -2.16
Cbx4O55187 Gm27672-201ENSMUST00000183751 204 ntBASIC1.55□□□□□ -2.16
Cbx4O55187 Mir6351-201ENSMUST00000183826 99 ntBASIC1.55□□□□□ -2.16
Cbx4O55187 Mir148b-201ENSMUST00000083626 97 ntBASIC1.55□□□□□ -2.16
Cbx4O55187 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
Cbx4O55187 Gm14674-201ENSMUST00000117816 342 ntBASIC1.54□□□□□ -2.16
Cbx4O55187 Gm13922-201ENSMUST00000119505 156 ntBASIC1.54□□□□□ -2.16
Cbx4O55187 Gm23996-201ENSMUST00000158062 131 ntBASIC1.54□□□□□ -2.16
Cbx4O55187 Gm16546-201ENSMUST00000159442 355 ntBASIC1.54□□□□□ -2.16
Cbx4O55187 Gm20734-201ENSMUST00000216939 193 ntBASIC1.54□□□□□ -2.16
Cbx4O55187 AC192091.2-201ENSMUST00000217869 117 ntBASIC1.54□□□□□ -2.16
Cbx4O55187 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
Cbx4O55187 Mir223-201ENSMUST00000102112 110 ntBASIC1.53□□□□□ -2.16
Cbx4O55187 Gm26074-201ENSMUST00000104063 129 ntBASIC1.53□□□□□ -2.16
Cbx4O55187 Gm25878-201ENSMUST00000104327 93 ntBASIC1.53□□□□□ -2.16
Cbx4O55187 Mir1298-201ENSMUST00000116681 98 ntBASIC1.53□□□□□ -2.16
Cbx4O55187 Gm11334-201ENSMUST00000121969 156 ntBASIC1.53□□□□□ -2.16
Cbx4O55187 Gm25882-201ENSMUST00000157784 85 ntBASIC1.53□□□□□ -2.16
Cbx4O55187 Gm24345-201ENSMUST00000158706 124 ntBASIC1.53□□□□□ -2.16
Cbx4O55187 Gm24174-201ENSMUST00000158933 111 ntBASIC1.53□□□□□ -2.16
Cbx4O55187 Gm25035-201ENSMUST00000175414 77 ntBASIC1.53□□□□□ -2.16
Cbx4O55187 Gm29613-201ENSMUST00000185846 313 ntBASIC1.53□□□□□ -2.16
Cbx4O55187 Gm29544-201ENSMUST00000188860 313 ntBASIC1.53□□□□□ -2.16
Cbx4O55187 Gm28808-201ENSMUST00000190978 313 ntBASIC1.53□□□□□ -2.16
Cbx4O55187 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC1.53□□□□□ -2.16
Cbx4O55187 Gm43749-201ENSMUST00000199345 352 ntBASIC1.53□□□□□ -2.16
Cbx4O55187 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC1.53□□□□□ -2.16
Cbx4O55187 Gm45544-201ENSMUST00000211130 88 ntBASIC1.53□□□□□ -2.16
Cbx4O55187 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
Cbx4O55187 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
Cbx4O55187 Gm25855-201ENSMUST00000082787 72 ntBASIC1.53□□□□□ -2.16
Cbx4O55187 Gm25832-201ENSMUST00000104140 130 ntBASIC1.52□□□□□ -2.17
Cbx4O55187 Gm11856-201ENSMUST00000118712 276 ntBASIC1.52□□□□□ -2.17
Cbx4O55187 Gm22612-201ENSMUST00000158293 101 ntBASIC1.52□□□□□ -2.17
Cbx4O55187 Trav5d-3-201ENSMUST00000170041 270 ntBASIC1.52□□□□□ -2.17
Cbx4O55187 Gm25750-201ENSMUST00000175483 112 ntBASIC1.52□□□□□ -2.17
Cbx4O55187 Gm27898-201ENSMUST00000183987 80 ntBASIC1.52□□□□□ -2.17
Cbx4O55187 Gm28409-201ENSMUST00000187064 103 ntBASIC1.52□□□□□ -2.17
Cbx4O55187 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC1.52□□□□□ -2.17
Cbx4O55187 Gm25409-201ENSMUST00000083764 131 ntBASIC1.52□□□□□ -2.17
Cbx4O55187 Gm14567-201ENSMUST00000117155 174 ntBASIC1.51□□□□□ -2.17
Cbx4O55187 Gm14671-201ENSMUST00000121790 262 ntBASIC1.51□□□□□ -2.17
Cbx4O55187 n-R5s73-201ENSMUST00000122508 107 ntBASIC1.51□□□□□ -2.17
Cbx4O55187 Gm22336-201ENSMUST00000157719 107 ntBASIC1.51□□□□□ -2.17
Cbx4O55187 Gm23080-201ENSMUST00000157846 103 ntBASIC1.51□□□□□ -2.17
Cbx4O55187 Gm22967-201ENSMUST00000157956 239 ntBASIC1.51□□□□□ -2.17
Cbx4O55187 Gm17528-201ENSMUST00000171026 239 ntBASIC1.51□□□□□ -2.17
Cbx4O55187 Gm26073-201ENSMUST00000179906 127 ntBASIC1.51□□□□□ -2.17
Cbx4O55187 Gm37116-201ENSMUST00000195161 147 ntBASIC1.51□□□□□ -2.17
Cbx4O55187 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC1.51□□□□□ -2.17
Cbx4O55187 Gm44338-201ENSMUST00000198614 110 ntBASIC1.51□□□□□ -2.17
Cbx4O55187 Gm44384-201ENSMUST00000200208 114 ntBASIC1.51□□□□□ -2.17
Cbx4O55187 Gm22283-201ENSMUST00000082556 161 ntBASIC1.51□□□□□ -2.17
Cbx4O55187 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.51□□□□□ -2.17
Cbx4O55187 Mir301b-201ENSMUST00000102333 97 ntBASIC1.5□□□□□ -2.17
Cbx4O55187 Mir880-201ENSMUST00000104809 78 ntBASIC1.5□□□□□ -2.17
Cbx4O55187 Gm13345-201ENSMUST00000121928 228 ntBASIC1.5□□□□□ -2.17
Cbx4O55187 Gm24000-201ENSMUST00000158063 89 ntBASIC1.5□□□□□ -2.17
Cbx4O55187 Mir1966-201ENSMUST00000158807 108 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 136.9 ms