Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Gm25980-201ENSMUST00000157176 218 ntBASIC-0.21□□□□□ -2.44
Scn8aQ9WTU3 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC-0.21□□□□□ -2.44
Scn8aQ9WTU3 Gm22294-201ENSMUST00000083308 104 ntBASIC-0.21□□□□□ -2.44
Scn8aQ9WTU3 Gm23025-201ENSMUST00000158769 111 ntBASIC-0.21□□□□□ -2.44
Scn8aQ9WTU3 Gm24575-201ENSMUST00000175502 77 ntBASIC-0.21□□□□□ -2.44
Scn8aQ9WTU3 Gm11392-201ENSMUST00000181419 710 ntBASIC-0.21□□□□□ -2.44
Scn8aQ9WTU3 Mir8107-201ENSMUST00000184024 117 ntBASIC-0.21□□□□□ -2.44
Scn8aQ9WTU3 Gm27943-201ENSMUST00000184844 116 ntBASIC-0.21□□□□□ -2.44
Scn8aQ9WTU3 Gm36946-201ENSMUST00000192706 435 ntBASIC-0.21□□□□□ -2.44
Scn8aQ9WTU3 Gm43367-201ENSMUST00000199986 625 ntBASIC-0.21□□□□□ -2.44
Scn8aQ9WTU3 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC-0.22□□□□□ -2.44
Scn8aQ9WTU3 Gm26384-201ENSMUST00000102183 110 ntBASIC-0.22□□□□□ -2.44
Scn8aQ9WTU3 Gm24283-201ENSMUST00000104233 107 ntBASIC-0.22□□□□□ -2.44
Scn8aQ9WTU3 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC-0.22□□□□□ -2.44
Scn8aQ9WTU3 Mir3470a-201ENSMUST00000175223 77 ntBASIC-0.22□□□□□ -2.44
Scn8aQ9WTU3 Gm22466-201ENSMUST00000175278 69 ntBASIC-0.22□□□□□ -2.44
Scn8aQ9WTU3 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC-0.22□□□□□ -2.44
Scn8aQ9WTU3 Mir6377-201ENSMUST00000183760 114 ntBASIC-0.22□□□□□ -2.44
Scn8aQ9WTU3 Gm14392-201ENSMUST00000120332 401 ntBASIC-0.23□□□□□ -2.45
Scn8aQ9WTU3 Gm24315-201ENSMUST00000177835 127 ntBASIC-0.23□□□□□ -2.45
Scn8aQ9WTU3 Gm44726-201ENSMUST00000203427 217 ntBASIC-0.23□□□□□ -2.45
Scn8aQ9WTU3 Gm44473-201ENSMUST00000204039 152 ntBASIC-0.23□□□□□ -2.45
Scn8aQ9WTU3 Gm22248-201ENSMUST00000082482 150 ntBASIC-0.23□□□□□ -2.45
Scn8aQ9WTU3 Traj38-201ENSMUST00000103704 62 ntAPPRIS P1 BASIC-0.23□□□□□ -2.45
Scn8aQ9WTU3 Gm24818-201ENSMUST00000175093 161 ntBASIC-0.23□□□□□ -2.45
Scn8aQ9WTU3 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC-0.23□□□□□ -2.45
Scn8aQ9WTU3 Gm26011-201ENSMUST00000104410 104 ntBASIC-0.24□□□□□ -2.45
Scn8aQ9WTU3 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC-0.24□□□□□ -2.45
Scn8aQ9WTU3 Gm25108-201ENSMUST00000122473 78 ntBASIC-0.24□□□□□ -2.45
Scn8aQ9WTU3 Gm23665-201ENSMUST00000158054 62 ntBASIC-0.24□□□□□ -2.45
Scn8aQ9WTU3 Gm28917-201ENSMUST00000187294 237 ntBASIC-0.24□□□□□ -2.45
Scn8aQ9WTU3 Gm28766-201ENSMUST00000191086 234 ntBASIC-0.24□□□□□ -2.45
Scn8aQ9WTU3 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC-0.24□□□□□ -2.45
Scn8aQ9WTU3 Gm45403-201ENSMUST00000209453 276 ntBASIC-0.24□□□□□ -2.45
Scn8aQ9WTU3 Mir126a-201ENSMUST00000083606 73 ntBASIC-0.24□□□□□ -2.45
Scn8aQ9WTU3 Gm24587-201ENSMUST00000116697 89 ntBASIC-0.25□□□□□ -2.45
Scn8aQ9WTU3 Gm22321-201ENSMUST00000157152 104 ntBASIC-0.25□□□□□ -2.45
Scn8aQ9WTU3 Gm26073-201ENSMUST00000179906 127 ntBASIC-0.25□□□□□ -2.45
Scn8aQ9WTU3 AC154994.1-201ENSMUST00000217395 302 ntBASIC-0.25□□□□□ -2.45
Scn8aQ9WTU3 Snora75-201ENSMUST00000082903 133 ntBASIC-0.25□□□□□ -2.45
Scn8aQ9WTU3 Gm10172-201ENSMUST00000085929 558 ntBASIC-0.25□□□□□ -2.45
Scn8aQ9WTU3 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC-0.25□□□□□ -2.45
Scn8aQ9WTU3 Mir487b-201ENSMUST00000102265 82 ntBASIC-0.25□□□□□ -2.45
Scn8aQ9WTU3 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC-0.25□□□□□ -2.45
Scn8aQ9WTU3 AC147101.1-201ENSMUST00000217964 312 ntBASIC-0.25□□□□□ -2.45
Scn8aQ9WTU3 AC102369.1-201ENSMUST00000218415 373 ntBASIC-0.25□□□□□ -2.45
Scn8aQ9WTU3 Gm26123-201ENSMUST00000083363 135 ntBASIC-0.25□□□□□ -2.45
Scn8aQ9WTU3 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC-0.25□□□□□ -2.45
Scn8aQ9WTU3 Gm25317-201ENSMUST00000116824 129 ntBASIC-0.26□□□□□ -2.45
Scn8aQ9WTU3 Gm14766-201ENSMUST00000121689 367 ntBASIC-0.26□□□□□ -2.45
Scn8aQ9WTU3 Gm26415-201ENSMUST00000157673 292 ntBASIC-0.26□□□□□ -2.45
Scn8aQ9WTU3 Gm22337-201ENSMUST00000157721 132 ntBASIC-0.26□□□□□ -2.45
Scn8aQ9WTU3 Gm22113-201ENSMUST00000158343 104 ntBASIC-0.26□□□□□ -2.45
Scn8aQ9WTU3 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC-0.26□□□□□ -2.45
Scn8aQ9WTU3 Gm20462-201ENSMUST00000172623 408 ntBASIC-0.26□□□□□ -2.45
Scn8aQ9WTU3 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC-0.26□□□□□ -2.45
Scn8aQ9WTU3 Gm25596-201ENSMUST00000178368 107 ntBASIC-0.26□□□□□ -2.45
Scn8aQ9WTU3 Gm7654-201ENSMUST00000186738 683 ntBASIC-0.26□□□□□ -2.45
Scn8aQ9WTU3 Gm18291-201ENSMUST00000190791 301 ntBASIC-0.26□□□□□ -2.45
Scn8aQ9WTU3 Gm22303-201ENSMUST00000082686 122 ntBASIC-0.26□□□□□ -2.45
Scn8aQ9WTU3 Mir451a-201ENSMUST00000093557 72 ntBASIC-0.26□□□□□ -2.45
Scn8aQ9WTU3 Gm23989-201ENSMUST00000117030 66 ntBASIC-0.26□□□□□ -2.45
Scn8aQ9WTU3 Gm24595-201ENSMUST00000122501 110 ntBASIC-0.26□□□□□ -2.45
Scn8aQ9WTU3 Mir100-201ENSMUST00000175270 80 ntBASIC-0.26□□□□□ -2.45
Scn8aQ9WTU3 Gm45544-201ENSMUST00000211130 88 ntBASIC-0.26□□□□□ -2.45
Scn8aQ9WTU3 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC-0.26□□□□□ -2.45
Scn8aQ9WTU3 C030006N10Rik-201ENSMUST00000219077 517 ntBASIC-0.26□□□□□ -2.45
Scn8aQ9WTU3 Snord49b-201ENSMUST00000082503 72 ntBASIC-0.26□□□□□ -2.45
Scn8aQ9WTU3 Mir463-201ENSMUST00000093570 75 ntBASIC-0.26□□□□□ -2.45
Scn8aQ9WTU3 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC-0.27□□□□□ -2.45
Scn8aQ9WTU3 Gm23113-201ENSMUST00000158477 99 ntBASIC-0.27□□□□□ -2.45
Scn8aQ9WTU3 Gm26335-201ENSMUST00000178449 107 ntBASIC-0.27□□□□□ -2.45
Scn8aQ9WTU3 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC-0.27□□□□□ -2.45
Scn8aQ9WTU3 Gm45197-201ENSMUST00000205288 151 ntBASIC-0.27□□□□□ -2.45
Scn8aQ9WTU3 Mir377-201ENSMUST00000083504 68 ntBASIC-0.27□□□□□ -2.45
Scn8aQ9WTU3 Gm24116-201ENSMUST00000103975 107 ntBASIC-0.28□□□□□ -2.45
Scn8aQ9WTU3 Gm23212-201ENSMUST00000122718 60 ntBASIC-0.28□□□□□ -2.45
Scn8aQ9WTU3 Gm24728-201ENSMUST00000158226 125 ntBASIC-0.28□□□□□ -2.45
Scn8aQ9WTU3 Gm23921-201ENSMUST00000175258 107 ntBASIC-0.28□□□□□ -2.45
Scn8aQ9WTU3 Gm27540-201ENSMUST00000184950 187 ntBASIC-0.28□□□□□ -2.45
Scn8aQ9WTU3 Gm27919-201ENSMUST00000185163 107 ntBASIC-0.28□□□□□ -2.45
Scn8aQ9WTU3 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC-0.28□□□□□ -2.45
Scn8aQ9WTU3 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC-0.28□□□□□ -2.45
Scn8aQ9WTU3 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC-0.28□□□□□ -2.45
Scn8aQ9WTU3 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC-0.28□□□□□ -2.45
Scn8aQ9WTU3 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC-0.28□□□□□ -2.45
Scn8aQ9WTU3 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC-0.28□□□□□ -2.45
Scn8aQ9WTU3 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC-0.28□□□□□ -2.45
Scn8aQ9WTU3 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC-0.28□□□□□ -2.45
Scn8aQ9WTU3 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC-0.28□□□□□ -2.45
Scn8aQ9WTU3 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC-0.28□□□□□ -2.45
Scn8aQ9WTU3 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC-0.28□□□□□ -2.45
Scn8aQ9WTU3 Mir7229-201ENSMUST00000197062 53 ntBASIC-0.28□□□□□ -2.45
Scn8aQ9WTU3 Mir145a-201ENSMUST00000083658 70 ntBASIC-0.28□□□□□ -2.45
Scn8aQ9WTU3 Gm25338-201ENSMUST00000116849 120 ntBASIC-0.28□□□□□ -2.45
Scn8aQ9WTU3 Gm11386-201ENSMUST00000117761 347 ntBASIC-0.28□□□□□ -2.45
Scn8aQ9WTU3 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC-0.28□□□□□ -2.45
Scn8aQ9WTU3 Gm23101-201ENSMUST00000157550 137 ntBASIC-0.28□□□□□ -2.45
Scn8aQ9WTU3 Gm22841-201ENSMUST00000158443 62 ntBASIC-0.28□□□□□ -2.45
Scn8aQ9WTU3 Gm43884-201ENSMUST00000204251 559 ntBASIC-0.28□□□□□ -2.45
Retrieved 100 of 76,532 protein–RNA pairs in 167 ms