Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Nubp1Q9R060 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Nubp1Q9R060 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC3.07□□□□□ -1.92
Nubp1Q9R060 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Nubp1Q9R060 Gm22815-201ENSMUST00000157451 62 ntBASIC3.07□□□□□ -1.92
Nubp1Q9R060 Gm23668-201ENSMUST00000157465 111 ntBASIC3.07□□□□□ -1.92
Nubp1Q9R060 Gm22011-201ENSMUST00000158790 123 ntBASIC3.07□□□□□ -1.92
Nubp1Q9R060 Gm44393-201ENSMUST00000197418 138 ntBASIC3.07□□□□□ -1.92
Nubp1Q9R060 AC153948.1-201ENSMUST00000219080 3838 ntBASIC3.07□□□□□ -1.92
Nubp1Q9R060 Gm25610-201ENSMUST00000104016 129 ntBASIC3.06□□□□□ -1.92
Nubp1Q9R060 Mir880-201ENSMUST00000104809 78 ntBASIC3.06□□□□□ -1.92
Nubp1Q9R060 Gm25680-201ENSMUST00000116917 126 ntBASIC3.06□□□□□ -1.92
Nubp1Q9R060 Gm22635-201ENSMUST00000116962 126 ntBASIC3.06□□□□□ -1.92
Nubp1Q9R060 Gm23788-201ENSMUST00000122535 106 ntBASIC3.06□□□□□ -1.92
Nubp1Q9R060 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC3.06□□□□□ -1.92
Nubp1Q9R060 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC3.06□□□□□ -1.92
Nubp1Q9R060 Gm20399-201ENSMUST00000174652 132 ntBASIC3.06□□□□□ -1.92
Nubp1Q9R060 Mir6916-201ENSMUST00000184514 63 ntBASIC3.06□□□□□ -1.92
Nubp1Q9R060 Gm37085-201ENSMUST00000193780 196 ntBASIC3.06□□□□□ -1.92
Nubp1Q9R060 Gm45522-201ENSMUST00000210784 166 ntBASIC3.06□□□□□ -1.92
Nubp1Q9R060 Olfr1202-202ENSMUST00000214703 3665 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Nubp1Q9R060 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Nubp1Q9R060 Gm23615-201ENSMUST00000082602 65 ntBASIC3.06□□□□□ -1.92
Nubp1Q9R060 Gm25855-201ENSMUST00000082787 72 ntBASIC3.06□□□□□ -1.92
Nubp1Q9R060 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
Nubp1Q9R060 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC3.06□□□□□ -1.92
Nubp1Q9R060 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC3.06□□□□□ -1.92
Nubp1Q9R060 Gm15697-201ENSMUST00000121946 2902 ntBASIC3.06□□□□□ -1.92
Nubp1Q9R060 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Nubp1Q9R060 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Nubp1Q9R060 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Nubp1Q9R060 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC3.05□□□□□ -1.92
Nubp1Q9R060 Gm23223-201ENSMUST00000158119 127 ntBASIC3.05□□□□□ -1.92
Nubp1Q9R060 Gm23380-201ENSMUST00000158448 103 ntBASIC3.05□□□□□ -1.92
Nubp1Q9R060 Gm25976-201ENSMUST00000158695 130 ntBASIC3.05□□□□□ -1.92
Nubp1Q9R060 Gm6947-201ENSMUST00000186254 78 ntBASIC3.05□□□□□ -1.92
Nubp1Q9R060 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC3.05□□□□□ -1.92
Nubp1Q9R060 Gm43977-201ENSMUST00000203970 189 ntBASIC3.05□□□□□ -1.92
Nubp1Q9R060 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Nubp1Q9R060 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Nubp1Q9R060 AC161254.1-201ENSMUST00000220310 3842 ntBASIC3.05□□□□□ -1.92
Nubp1Q9R060 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC3.05□□□□□ -1.92
Nubp1Q9R060 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Nubp1Q9R060 Gm19194-201ENSMUST00000192015 3774 ntBASIC3.04□□□□□ -1.92
Nubp1Q9R060 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC3.04□□□□□ -1.92
Nubp1Q9R060 Gm23697-201ENSMUST00000103897 110 ntBASIC3.04□□□□□ -1.92
Nubp1Q9R060 Gm8260-201ENSMUST00000119230 353 ntBASIC3.04□□□□□ -1.92
Nubp1Q9R060 8030453O22Rik-201ENSMUST00000128919 370 ntTSL 3 BASIC3.04□□□□□ -1.92
Nubp1Q9R060 Gm26214-201ENSMUST00000158581 107 ntBASIC3.04□□□□□ -1.92
Nubp1Q9R060 Mir6388-201ENSMUST00000184417 75 ntBASIC3.04□□□□□ -1.92
Nubp1Q9R060 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC3.04□□□□□ -1.92
Nubp1Q9R060 Gm44680-201ENSMUST00000208414 2910 ntBASIC3.03□□□□□ -1.92
Nubp1Q9R060 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
Nubp1Q9R060 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC3.03□□□□□ -1.92
Nubp1Q9R060 Gm26077-201ENSMUST00000104064 123 ntBASIC3.03□□□□□ -1.92
Nubp1Q9R060 n-R5s188-201ENSMUST00000122646 105 ntBASIC3.03□□□□□ -1.92
Nubp1Q9R060 Gm25112-201ENSMUST00000122680 104 ntBASIC3.03□□□□□ -1.92
Nubp1Q9R060 Gm26090-201ENSMUST00000157897 128 ntBASIC3.03□□□□□ -1.92
Nubp1Q9R060 Gm24771-201ENSMUST00000158508 137 ntBASIC3.03□□□□□ -1.92
Nubp1Q9R060 Gm25996-201ENSMUST00000175393 117 ntBASIC3.03□□□□□ -1.92
Nubp1Q9R060 Gm28358-202ENSMUST00000189292 223 ntBASIC3.03□□□□□ -1.92
Nubp1Q9R060 Gm37007-201ENSMUST00000194234 319 ntBASIC3.03□□□□□ -1.92
Nubp1Q9R060 Gm45471-201ENSMUST00000211270 281 ntBASIC3.03□□□□□ -1.92
Nubp1Q9R060 AC100590.2-201ENSMUST00000219028 215 ntBASIC3.03□□□□□ -1.92
Nubp1Q9R060 Cd52-201ENSMUST00000000696 514 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Nubp1Q9R060 Gm22249-201ENSMUST00000082485 136 ntBASIC3.03□□□□□ -1.92
Nubp1Q9R060 Gm18795-202ENSMUST00000223373 2920 ntBASIC3.03□□□□□ -1.92
Nubp1Q9R060 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Nubp1Q9R060 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC3.03□□□□□ -1.92
Nubp1Q9R060 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.93
Nubp1Q9R060 Gm6185-201ENSMUST00000193379 3553 ntBASIC3.02□□□□□ -1.93
Nubp1Q9R060 n-R5s200-201ENSMUST00000104194 113 ntBASIC3.02□□□□□ -1.93
Nubp1Q9R060 n-R5s26-201ENSMUST00000104601 122 ntBASIC3.02□□□□□ -1.93
Nubp1Q9R060 Gm12858-201ENSMUST00000121913 208 ntBASIC3.02□□□□□ -1.93
Nubp1Q9R060 Gm23601-201ENSMUST00000157259 131 ntBASIC3.02□□□□□ -1.93
Nubp1Q9R060 Gm22515-201ENSMUST00000158273 305 ntBASIC3.02□□□□□ -1.93
Nubp1Q9R060 Gm22770-201ENSMUST00000158368 67 ntBASIC3.02□□□□□ -1.93
Nubp1Q9R060 Gm26004-201ENSMUST00000158804 116 ntBASIC3.02□□□□□ -1.93
Nubp1Q9R060 Mir3965-201ENSMUST00000175570 69 ntBASIC3.02□□□□□ -1.93
Nubp1Q9R060 Gm26109-201ENSMUST00000083970 70 ntBASIC3.02□□□□□ -1.93
Nubp1Q9R060 Gm44560-201ENSMUST00000207816 3115 ntBASIC3.02□□□□□ -1.93
Nubp1Q9R060 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Nubp1Q9R060 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Nubp1Q9R060 Gm14811-201ENSMUST00000117070 117 ntBASIC3.01□□□□□ -1.93
Nubp1Q9R060 Gm11248-201ENSMUST00000119568 201 ntBASIC3.01□□□□□ -1.93
Nubp1Q9R060 Gm26476-201ENSMUST00000122618 313 ntBASIC3.01□□□□□ -1.93
Nubp1Q9R060 Gm22983-201ENSMUST00000158308 104 ntBASIC3.01□□□□□ -1.93
Nubp1Q9R060 Mir3471-1-201ENSMUST00000175139 131 ntBASIC3.01□□□□□ -1.93
Nubp1Q9R060 Mir3070b-201ENSMUST00000175205 89 ntBASIC3.01□□□□□ -1.93
Nubp1Q9R060 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC3.01□□□□□ -1.93
Nubp1Q9R060 Gm38083-201ENSMUST00000194758 3498 ntBASIC3.01□□□□□ -1.93
Nubp1Q9R060 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Nubp1Q9R060 Gm43540-201ENSMUST00000196320 3848 ntBASIC3.01□□□□□ -1.93
Nubp1Q9R060 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC3□□□□□ -1.93
Nubp1Q9R060 Gm22545-201ENSMUST00000104350 132 ntBASIC3□□□□□ -1.93
Nubp1Q9R060 Gm11253-201ENSMUST00000118486 201 ntBASIC3□□□□□ -1.93
Nubp1Q9R060 Gm23123-201ENSMUST00000157648 144 ntBASIC3□□□□□ -1.93
Nubp1Q9R060 Gm24333-201ENSMUST00000175101 84 ntBASIC3□□□□□ -1.93
Nubp1Q9R060 Gm20693-201ENSMUST00000177431 211 ntBASIC3□□□□□ -1.93
Nubp1Q9R060 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 176.5 ms