Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Gm22884-201ENSMUST00000083127 140 ntBASIC1.62□□□□□ -2.15
Sf3a3Q9D554 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
Sf3a3Q9D554 Gm42770-201ENSMUST00000199657 4155 ntBASIC1.62□□□□□ -2.15
Sf3a3Q9D554 Gm14914-201ENSMUST00000117576 2031 ntBASIC1.62□□□□□ -2.15
Sf3a3Q9D554 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC1.62□□□□□ -2.15
Sf3a3Q9D554 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
Sf3a3Q9D554 Gm24171-201ENSMUST00000104126 131 ntBASIC1.61□□□□□ -2.15
Sf3a3Q9D554 Gm15115-201ENSMUST00000121145 264 ntBASIC1.61□□□□□ -2.15
Sf3a3Q9D554 Gm11334-201ENSMUST00000121969 156 ntBASIC1.61□□□□□ -2.15
Sf3a3Q9D554 Gm22163-201ENSMUST00000158408 135 ntBASIC1.61□□□□□ -2.15
Sf3a3Q9D554 Gm24174-201ENSMUST00000158933 111 ntBASIC1.61□□□□□ -2.15
Sf3a3Q9D554 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC1.61□□□□□ -2.15
Sf3a3Q9D554 Gm38364-201ENSMUST00000191814 179 ntBASIC1.61□□□□□ -2.15
Sf3a3Q9D554 Gm37997-201ENSMUST00000193515 267 ntBASIC1.61□□□□□ -2.15
Sf3a3Q9D554 Gm19790-201ENSMUST00000214414 251 ntBASIC1.61□□□□□ -2.15
Sf3a3Q9D554 AC134601.1-201ENSMUST00000221058 109 ntBASIC1.61□□□□□ -2.15
Sf3a3Q9D554 AC154282.1-201ENSMUST00000223154 265 ntBASIC1.61□□□□□ -2.15
Sf3a3Q9D554 Gm24262-201ENSMUST00000157431 144 ntBASIC1.6□□□□□ -2.15
Sf3a3Q9D554 Gm24750-201ENSMUST00000157843 104 ntBASIC1.6□□□□□ -2.15
Sf3a3Q9D554 Gm23996-201ENSMUST00000158062 131 ntBASIC1.6□□□□□ -2.15
Sf3a3Q9D554 Gm22476-201ENSMUST00000158902 100 ntBASIC1.6□□□□□ -2.15
Sf3a3Q9D554 Mir7678-201ENSMUST00000185076 71 ntBASIC1.6□□□□□ -2.15
Sf3a3Q9D554 Snord80-202ENSMUST00000199023 77 ntBASIC1.6□□□□□ -2.15
Sf3a3Q9D554 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC1.6□□□□□ -2.15
Sf3a3Q9D554 Gm22973-201ENSMUST00000083298 191 ntBASIC1.6□□□□□ -2.15
Sf3a3Q9D554 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
Sf3a3Q9D554 Snord72-201ENSMUST00000104549 81 ntBASIC1.59□□□□□ -2.15
Sf3a3Q9D554 Gm11856-201ENSMUST00000118712 276 ntBASIC1.59□□□□□ -2.15
Sf3a3Q9D554 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC1.59□□□□□ -2.15
Sf3a3Q9D554 Gm24222-201ENSMUST00000158834 93 ntBASIC1.59□□□□□ -2.15
Sf3a3Q9D554 Mir7675-201ENSMUST00000184262 58 ntBASIC1.59□□□□□ -2.15
Sf3a3Q9D554 Gm29603-201ENSMUST00000186792 334 ntBASIC1.59□□□□□ -2.15
Sf3a3Q9D554 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC1.59□□□□□ -2.15
Sf3a3Q9D554 Gm25038-201ENSMUST00000082928 130 ntBASIC1.59□□□□□ -2.15
Sf3a3Q9D554 Gm8935-202ENSMUST00000105727 1959 ntBASIC1.59□□□□□ -2.16
Sf3a3Q9D554 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.59□□□□□ -2.16
Sf3a3Q9D554 Gm26077-201ENSMUST00000104064 123 ntBASIC1.58□□□□□ -2.16
Sf3a3Q9D554 Gm14671-201ENSMUST00000121790 262 ntBASIC1.58□□□□□ -2.16
Sf3a3Q9D554 Trav5d-3-201ENSMUST00000170041 270 ntBASIC1.58□□□□□ -2.16
Sf3a3Q9D554 Mir3061-201ENSMUST00000175129 91 ntBASIC1.58□□□□□ -2.16
Sf3a3Q9D554 Mir5104-201ENSMUST00000175319 94 ntBASIC1.58□□□□□ -2.16
Sf3a3Q9D554 Mir6481-201ENSMUST00000184617 110 ntBASIC1.58□□□□□ -2.16
Sf3a3Q9D554 Gm18795-202ENSMUST00000223373 2920 ntBASIC1.57□□□□□ -2.16
Sf3a3Q9D554 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
Sf3a3Q9D554 Gm25878-201ENSMUST00000104327 93 ntBASIC1.57□□□□□ -2.16
Sf3a3Q9D554 Mir880-201ENSMUST00000104809 78 ntBASIC1.57□□□□□ -2.16
Sf3a3Q9D554 Gm23551-201ENSMUST00000116852 121 ntBASIC1.57□□□□□ -2.16
Sf3a3Q9D554 n-R5s73-201ENSMUST00000122508 107 ntBASIC1.57□□□□□ -2.16
Sf3a3Q9D554 Gm22557-201ENSMUST00000157804 102 ntBASIC1.57□□□□□ -2.16
Sf3a3Q9D554 Gm24000-201ENSMUST00000158063 89 ntBASIC1.57□□□□□ -2.16
Sf3a3Q9D554 Gm26213-201ENSMUST00000158582 110 ntBASIC1.57□□□□□ -2.16
Sf3a3Q9D554 Gm27672-201ENSMUST00000183751 204 ntBASIC1.57□□□□□ -2.16
Sf3a3Q9D554 Gm28383-201ENSMUST00000187563 139 ntBASIC1.57□□□□□ -2.16
Sf3a3Q9D554 Gm45544-201ENSMUST00000211130 88 ntBASIC1.57□□□□□ -2.16
Sf3a3Q9D554 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.57□□□□□ -2.16
Sf3a3Q9D554 Gm42718-201ENSMUST00000197319 2681 ntBASIC1.56□□□□□ -2.16
Sf3a3Q9D554 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.56□□□□□ -2.16
Sf3a3Q9D554 Mir544-201ENSMUST00000103813 78 ntBASIC1.56□□□□□ -2.16
Sf3a3Q9D554 Snord100-201ENSMUST00000116836 74 ntBASIC1.56□□□□□ -2.16
Sf3a3Q9D554 Gm22477-201ENSMUST00000122569 316 ntBASIC1.56□□□□□ -2.16
Sf3a3Q9D554 Gm24559-201ENSMUST00000157519 121 ntBASIC1.56□□□□□ -2.16
Sf3a3Q9D554 Gm26415-201ENSMUST00000157673 292 ntBASIC1.56□□□□□ -2.16
Sf3a3Q9D554 Gm22850-201ENSMUST00000157714 82 ntBASIC1.56□□□□□ -2.16
Sf3a3Q9D554 Gm24345-201ENSMUST00000158706 124 ntBASIC1.56□□□□□ -2.16
Sf3a3Q9D554 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC1.56□□□□□ -2.16
Sf3a3Q9D554 Gm44464-201ENSMUST00000198010 138 ntBASIC1.56□□□□□ -2.16
Sf3a3Q9D554 CT033781.2-201ENSMUST00000221113 153 ntBASIC1.56□□□□□ -2.16
Sf3a3Q9D554 Gm25855-201ENSMUST00000082787 72 ntBASIC1.56□□□□□ -2.16
Sf3a3Q9D554 Gm37602-201ENSMUST00000195187 3310 ntBASIC1.56□□□□□ -2.16
Sf3a3Q9D554 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
Sf3a3Q9D554 Gm25541-201ENSMUST00000116888 126 ntBASIC1.55□□□□□ -2.16
Sf3a3Q9D554 Gm26181-201ENSMUST00000157687 106 ntBASIC1.55□□□□□ -2.16
Sf3a3Q9D554 Gm22337-201ENSMUST00000157721 132 ntBASIC1.55□□□□□ -2.16
Sf3a3Q9D554 Gm23209-201ENSMUST00000158667 110 ntBASIC1.55□□□□□ -2.16
Sf3a3Q9D554 Gm24677-201ENSMUST00000158755 150 ntBASIC1.55□□□□□ -2.16
Sf3a3Q9D554 Gm22403-201ENSMUST00000174919 84 ntBASIC1.55□□□□□ -2.16
Sf3a3Q9D554 Gm44962-201ENSMUST00000206460 279 ntBASIC1.55□□□□□ -2.16
Sf3a3Q9D554 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.55□□□□□ -2.16
Sf3a3Q9D554 Gm24523-201ENSMUST00000083965 132 ntBASIC1.55□□□□□ -2.16
Sf3a3Q9D554 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.55□□□□□ -2.16
Sf3a3Q9D554 Gm6444-201ENSMUST00000119611 458 ntBASIC1.54□□□□□ -2.16
Sf3a3Q9D554 Gm15536-201ENSMUST00000121411 114 ntBASIC1.54□□□□□ -2.16
Sf3a3Q9D554 Gm23277-201ENSMUST00000157914 136 ntBASIC1.54□□□□□ -2.16
Sf3a3Q9D554 Gm16404-201ENSMUST00000177739 468 ntBASIC1.54□□□□□ -2.16
Sf3a3Q9D554 Gm26073-201ENSMUST00000179906 127 ntBASIC1.54□□□□□ -2.16
Sf3a3Q9D554 Gm14598-201ENSMUST00000180109 468 ntBASIC1.54□□□□□ -2.16
Sf3a3Q9D554 Gm14625-201ENSMUST00000180231 468 ntBASIC1.54□□□□□ -2.16
Sf3a3Q9D554 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC1.54□□□□□ -2.16
Sf3a3Q9D554 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.54□□□□□ -2.16
Sf3a3Q9D554 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
Sf3a3Q9D554 Gm22283-201ENSMUST00000082556 161 ntBASIC1.54□□□□□ -2.16
Sf3a3Q9D554 Gm26074-201ENSMUST00000104063 129 ntBASIC1.53□□□□□ -2.16
Sf3a3Q9D554 Gm22148-201ENSMUST00000104445 107 ntBASIC1.53□□□□□ -2.16
Sf3a3Q9D554 Gm11792-201ENSMUST00000120640 168 ntBASIC1.53□□□□□ -2.16
Sf3a3Q9D554 Gm22387-201ENSMUST00000158191 131 ntBASIC1.53□□□□□ -2.16
Sf3a3Q9D554 Gm22665-201ENSMUST00000158720 275 ntBASIC1.53□□□□□ -2.16
Sf3a3Q9D554 Gm25409-201ENSMUST00000083764 131 ntBASIC1.53□□□□□ -2.16
Sf3a3Q9D554 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC1.52□□□□□ -2.17
Sf3a3Q9D554 Gm14567-201ENSMUST00000117155 174 ntBASIC1.52□□□□□ -2.17
Sf3a3Q9D554 Gm23558-201ENSMUST00000157823 80 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 165.4 ms