Protein–RNA interactions for Protein: Q9CZA6

Nde1, Nuclear distribution protein nudE homolog 1, mousemouse

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nde1Q9CZA6 Gm27585-201ENSMUST00000183717 199 ntBASIC1.1□□□□□ -2.23
Nde1Q9CZA6 Gm25038-201ENSMUST00000082928 130 ntBASIC1.1□□□□□ -2.23
Nde1Q9CZA6 Mir146-201ENSMUST00000083667 65 ntBASIC1.1□□□□□ -2.23
Nde1Q9CZA6 Gm25377-201ENSMUST00000104334 129 ntBASIC1.09□□□□□ -2.23
Nde1Q9CZA6 Gm13797-201ENSMUST00000121792 120 ntBASIC1.09□□□□□ -2.23
Nde1Q9CZA6 Gm26089-201ENSMUST00000157898 107 ntBASIC1.09□□□□□ -2.23
Nde1Q9CZA6 Gm25718-201ENSMUST00000158632 118 ntBASIC1.09□□□□□ -2.23
Nde1Q9CZA6 Gm28409-201ENSMUST00000187064 103 ntBASIC1.09□□□□□ -2.23
Nde1Q9CZA6 Gm43199-201ENSMUST00000200019 307 ntBASIC1.09□□□□□ -2.23
Nde1Q9CZA6 CT954323.1-201ENSMUST00000222774 229 ntBASIC1.09□□□□□ -2.23
Nde1Q9CZA6 Gm24762-201ENSMUST00000083689 104 ntBASIC1.09□□□□□ -2.23
Nde1Q9CZA6 Rny1-201ENSMUST00000083767 112 ntBASIC1.09□□□□□ -2.23
Nde1Q9CZA6 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.09□□□□□ -2.24
Nde1Q9CZA6 Mir541-201ENSMUST00000102097 90 ntBASIC1.08□□□□□ -2.24
Nde1Q9CZA6 Gm13801-201ENSMUST00000120750 160 ntBASIC1.08□□□□□ -2.24
Nde1Q9CZA6 Gm22553-201ENSMUST00000157797 295 ntBASIC1.08□□□□□ -2.24
Nde1Q9CZA6 Gm23898-201ENSMUST00000158111 103 ntBASIC1.08□□□□□ -2.24
Nde1Q9CZA6 Gm23047-201ENSMUST00000177661 94 ntBASIC1.08□□□□□ -2.24
Nde1Q9CZA6 Mir7091-201ENSMUST00000184075 79 ntBASIC1.08□□□□□ -2.24
Nde1Q9CZA6 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
Nde1Q9CZA6 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC1.08□□□□□ -2.24
Nde1Q9CZA6 Gm38183-201ENSMUST00000193189 205 ntBASIC1.08□□□□□ -2.24
Nde1Q9CZA6 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC1.08□□□□□ -2.24
Nde1Q9CZA6 Gm45508-201ENSMUST00000209298 299 ntBASIC1.08□□□□□ -2.24
Nde1Q9CZA6 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
Nde1Q9CZA6 Gm25636-201ENSMUST00000082666 133 ntBASIC1.08□□□□□ -2.24
Nde1Q9CZA6 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC1.08□□□□□ -2.24
Nde1Q9CZA6 Gm27579-201ENSMUST00000158113 63 ntBASIC1.07□□□□□ -2.24
Nde1Q9CZA6 Gm24634-201ENSMUST00000158672 107 ntBASIC1.07□□□□□ -2.24
Nde1Q9CZA6 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC1.07□□□□□ -2.24
Nde1Q9CZA6 Gm44326-201ENSMUST00000198226 101 ntBASIC1.07□□□□□ -2.24
Nde1Q9CZA6 AC154994.1-201ENSMUST00000217395 302 ntBASIC1.07□□□□□ -2.24
Nde1Q9CZA6 AC154213.2-201ENSMUST00000227138 187 ntBASIC1.07□□□□□ -2.24
Nde1Q9CZA6 Gm25634-201ENSMUST00000082667 105 ntBASIC1.07□□□□□ -2.24
Nde1Q9CZA6 Mir490-201ENSMUST00000093567 84 ntBASIC1.07□□□□□ -2.24
Nde1Q9CZA6 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
Nde1Q9CZA6 Gm18795-202ENSMUST00000223373 2920 ntBASIC1.07□□□□□ -2.24
Nde1Q9CZA6 Gm16032-201ENSMUST00000118534 168 ntBASIC1.06□□□□□ -2.24
Nde1Q9CZA6 Gm11204-201ENSMUST00000122438 147 ntBASIC1.06□□□□□ -2.24
Nde1Q9CZA6 Gm24594-201ENSMUST00000122502 99 ntBASIC1.06□□□□□ -2.24
Nde1Q9CZA6 Gm22145-201ENSMUST00000157396 148 ntBASIC1.06□□□□□ -2.24
Nde1Q9CZA6 Gm26038-201ENSMUST00000158151 106 ntBASIC1.06□□□□□ -2.24
Nde1Q9CZA6 Mir6350-201ENSMUST00000183639 105 ntBASIC1.06□□□□□ -2.24
Nde1Q9CZA6 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
Nde1Q9CZA6 Gm44052-201ENSMUST00000203382 396 ntBASIC1.06□□□□□ -2.24
Nde1Q9CZA6 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC1.06□□□□□ -2.24
Nde1Q9CZA6 Gm22306-201ENSMUST00000082692 107 ntBASIC1.06□□□□□ -2.24
Nde1Q9CZA6 Mir34a-201ENSMUST00000083559 102 ntBASIC1.06□□□□□ -2.24
Nde1Q9CZA6 Gm24494-201ENSMUST00000083804 81 ntBASIC1.06□□□□□ -2.24
Nde1Q9CZA6 Gm26293-201ENSMUST00000104170 84 ntBASIC1.05□□□□□ -2.24
Nde1Q9CZA6 Gm23277-201ENSMUST00000157914 136 ntBASIC1.05□□□□□ -2.24
Nde1Q9CZA6 Gm25750-201ENSMUST00000175483 112 ntBASIC1.05□□□□□ -2.24
Nde1Q9CZA6 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.05□□□□□ -2.24
Nde1Q9CZA6 Mir3087-201ENSMUST00000199405 56 ntBASIC1.05□□□□□ -2.24
Nde1Q9CZA6 Snord1a-201ENSMUST00000083160 74 ntBASIC1.05□□□□□ -2.24
Nde1Q9CZA6 n-R5s183-201ENSMUST00000083939 115 ntBASIC1.05□□□□□ -2.24
Nde1Q9CZA6 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
Nde1Q9CZA6 Gm24835-201ENSMUST00000116777 111 ntBASIC1.04□□□□□ -2.24
Nde1Q9CZA6 Gm6897-201ENSMUST00000117714 138 ntBASIC1.04□□□□□ -2.24
Nde1Q9CZA6 Gm14758-201ENSMUST00000119104 138 ntBASIC1.04□□□□□ -2.24
Nde1Q9CZA6 Gm12815-201ENSMUST00000121737 135 ntBASIC1.04□□□□□ -2.24
Nde1Q9CZA6 Gm23892-201ENSMUST00000158105 130 ntBASIC1.04□□□□□ -2.24
Nde1Q9CZA6 Gm25015-201ENSMUST00000158400 128 ntBASIC1.04□□□□□ -2.24
Nde1Q9CZA6 Gm25654-201ENSMUST00000158467 88 ntBASIC1.04□□□□□ -2.24
Nde1Q9CZA6 Mir3471-1-201ENSMUST00000175139 131 ntBASIC1.04□□□□□ -2.24
Nde1Q9CZA6 Gm26426-201ENSMUST00000177866 123 ntBASIC1.04□□□□□ -2.24
Nde1Q9CZA6 Gm23141-201ENSMUST00000178682 94 ntBASIC1.04□□□□□ -2.24
Nde1Q9CZA6 Gm26060-201ENSMUST00000180094 123 ntBASIC1.04□□□□□ -2.24
Nde1Q9CZA6 Gm28344-201ENSMUST00000185704 279 ntBASIC1.04□□□□□ -2.24
Nde1Q9CZA6 Gm43602-201ENSMUST00000196772 300 ntBASIC1.04□□□□□ -2.24
Nde1Q9CZA6 AC154328.1-201ENSMUST00000225875 307 ntBASIC1.04□□□□□ -2.24
Nde1Q9CZA6 Gm25142-201ENSMUST00000082698 107 ntBASIC1.04□□□□□ -2.24
Nde1Q9CZA6 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
Nde1Q9CZA6 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
Nde1Q9CZA6 Gm22785-201ENSMUST00000104087 132 ntBASIC1.03□□□□□ -2.24
Nde1Q9CZA6 Gm12449-201ENSMUST00000117572 234 ntBASIC1.03□□□□□ -2.24
Nde1Q9CZA6 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC1.03□□□□□ -2.24
Nde1Q9CZA6 Gm25390-201ENSMUST00000157341 103 ntBASIC1.03□□□□□ -2.24
Nde1Q9CZA6 Gm22586-201ENSMUST00000157507 122 ntBASIC1.03□□□□□ -2.24
Nde1Q9CZA6 Gm23584-201ENSMUST00000157655 129 ntBASIC1.03□□□□□ -2.24
Nde1Q9CZA6 Mir384-201ENSMUST00000083565 88 ntBASIC1.03□□□□□ -2.24
Nde1Q9CZA6 Gm25683-201ENSMUST00000083940 131 ntBASIC1.03□□□□□ -2.24
Nde1Q9CZA6 Gm12080-201ENSMUST00000119821 1883 ntBASIC1.03□□□□□ -2.25
Nde1Q9CZA6 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC1.02□□□□□ -2.25
Nde1Q9CZA6 Gm11334-201ENSMUST00000121969 156 ntBASIC1.02□□□□□ -2.25
Nde1Q9CZA6 Gm23655-201ENSMUST00000122627 105 ntBASIC1.02□□□□□ -2.25
Nde1Q9CZA6 Mir5104-201ENSMUST00000175319 94 ntBASIC1.02□□□□□ -2.25
Nde1Q9CZA6 Gm20630-201ENSMUST00000177387 551 ntBASIC1.02□□□□□ -2.25
Nde1Q9CZA6 Gm9251-201ENSMUST00000197202 628 ntBASIC1.02□□□□□ -2.25
Nde1Q9CZA6 Gm26379-202ENSMUST00000200225 132 ntBASIC1.02□□□□□ -2.25
Nde1Q9CZA6 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC1.02□□□□□ -2.25
Nde1Q9CZA6 AC168062.3-201ENSMUST00000227025 165 ntBASIC1.02□□□□□ -2.25
Nde1Q9CZA6 Gm23299-201ENSMUST00000082708 79 ntBASIC1.02□□□□□ -2.25
Nde1Q9CZA6 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC1.02□□□□□ -2.25
Nde1Q9CZA6 Gm24522-201ENSMUST00000083964 108 ntBASIC1.02□□□□□ -2.25
Nde1Q9CZA6 Gm24121-201ENSMUST00000102029 106 ntBASIC1.01□□□□□ -2.25
Nde1Q9CZA6 Mir466b-8-201ENSMUST00000103883 86 ntBASIC1.01□□□□□ -2.25
Nde1Q9CZA6 Snord89-201ENSMUST00000104516 110 ntBASIC1.01□□□□□ -2.25
Nde1Q9CZA6 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
Nde1Q9CZA6 Gm14923-201ENSMUST00000118270 155 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 76,532 protein–RNA pairs in 138.5 ms