Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Gm24076-201ENSMUST00000158179 94 ntBASIC1.36□□□□□ -2.19
Ddx28Q9CWT6 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC1.36□□□□□ -2.19
Ddx28Q9CWT6 Mir3061-201ENSMUST00000175129 91 ntBASIC1.36□□□□□ -2.19
Ddx28Q9CWT6 Gm22862-201ENSMUST00000178593 121 ntBASIC1.36□□□□□ -2.19
Ddx28Q9CWT6 Gm21064-202ENSMUST00000190583 278 ntBASIC1.36□□□□□ -2.19
Ddx28Q9CWT6 Gm42855-201ENSMUST00000197388 253 ntBASIC1.36□□□□□ -2.19
Ddx28Q9CWT6 Mir320-201ENSMUST00000083594 82 ntBASIC1.36□□□□□ -2.19
Ddx28Q9CWT6 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
Ddx28Q9CWT6 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
Ddx28Q9CWT6 Gm25541-201ENSMUST00000116888 126 ntBASIC1.35□□□□□ -2.19
Ddx28Q9CWT6 Gm14882-201ENSMUST00000117216 218 ntBASIC1.35□□□□□ -2.19
Ddx28Q9CWT6 Gm22559-201ENSMUST00000157329 134 ntBASIC1.35□□□□□ -2.19
Ddx28Q9CWT6 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.35□□□□□ -2.19
Ddx28Q9CWT6 Gm23545-201ENSMUST00000158205 104 ntBASIC1.35□□□□□ -2.19
Ddx28Q9CWT6 Gm23419-201ENSMUST00000175523 84 ntBASIC1.35□□□□□ -2.19
Ddx28Q9CWT6 Gm23141-201ENSMUST00000178682 94 ntBASIC1.35□□□□□ -2.19
Ddx28Q9CWT6 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC1.35□□□□□ -2.19
Ddx28Q9CWT6 Gm27898-201ENSMUST00000183987 80 ntBASIC1.35□□□□□ -2.19
Ddx28Q9CWT6 Mir7009-201ENSMUST00000184519 64 ntBASIC1.35□□□□□ -2.19
Ddx28Q9CWT6 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC1.35□□□□□ -2.19
Ddx28Q9CWT6 Gm23277-201ENSMUST00000157914 136 ntBASIC1.34□□□□□ -2.19
Ddx28Q9CWT6 Gm23258-201ENSMUST00000158319 106 ntBASIC1.34□□□□□ -2.19
Ddx28Q9CWT6 Mir5104-201ENSMUST00000175319 94 ntBASIC1.34□□□□□ -2.19
Ddx28Q9CWT6 Gm25750-201ENSMUST00000175483 112 ntBASIC1.34□□□□□ -2.19
Ddx28Q9CWT6 Mir669k-201ENSMUST00000177742 127 ntBASIC1.34□□□□□ -2.19
Ddx28Q9CWT6 Gm25673-201ENSMUST00000179957 127 ntBASIC1.34□□□□□ -2.19
Ddx28Q9CWT6 Gm28344-201ENSMUST00000185704 279 ntBASIC1.34□□□□□ -2.19
Ddx28Q9CWT6 Mir653-201ENSMUST00000102402 85 ntBASIC1.33□□□□□ -2.2
Ddx28Q9CWT6 Gm25068-201ENSMUST00000103895 110 ntBASIC1.33□□□□□ -2.2
Ddx28Q9CWT6 Gm25832-201ENSMUST00000104140 130 ntBASIC1.33□□□□□ -2.2
Ddx28Q9CWT6 Gm25377-201ENSMUST00000104334 129 ntBASIC1.33□□□□□ -2.2
Ddx28Q9CWT6 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC1.33□□□□□ -2.2
Ddx28Q9CWT6 Gm23996-201ENSMUST00000158062 131 ntBASIC1.33□□□□□ -2.2
Ddx28Q9CWT6 Gm25223-201ENSMUST00000158200 110 ntBASIC1.33□□□□□ -2.2
Ddx28Q9CWT6 Gm25654-201ENSMUST00000158467 88 ntBASIC1.33□□□□□ -2.2
Ddx28Q9CWT6 Gm22888-201ENSMUST00000158640 77 ntBASIC1.33□□□□□ -2.2
Ddx28Q9CWT6 Gm22403-201ENSMUST00000174919 84 ntBASIC1.33□□□□□ -2.2
Ddx28Q9CWT6 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
Ddx28Q9CWT6 Gm44326-201ENSMUST00000198226 101 ntBASIC1.33□□□□□ -2.2
Ddx28Q9CWT6 Gm43199-201ENSMUST00000200019 307 ntBASIC1.33□□□□□ -2.2
Ddx28Q9CWT6 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC1.33□□□□□ -2.2
Ddx28Q9CWT6 Gm22884-201ENSMUST00000083127 140 ntBASIC1.33□□□□□ -2.2
Ddx28Q9CWT6 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
Ddx28Q9CWT6 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC1.32□□□□□ -2.2
Ddx28Q9CWT6 Gm23221-201ENSMUST00000158118 93 ntBASIC1.32□□□□□ -2.2
Ddx28Q9CWT6 Gm23852-201ENSMUST00000158376 77 ntBASIC1.32□□□□□ -2.2
Ddx28Q9CWT6 Gm6003-201ENSMUST00000187903 463 ntBASIC1.32□□□□□ -2.2
Ddx28Q9CWT6 Gm28669-201ENSMUST00000188400 100 ntBASIC1.32□□□□□ -2.2
Ddx28Q9CWT6 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC1.32□□□□□ -2.2
Ddx28Q9CWT6 Snord1a-201ENSMUST00000083160 74 ntBASIC1.32□□□□□ -2.2
Ddx28Q9CWT6 Gm42718-201ENSMUST00000197319 2681 ntBASIC1.31□□□□□ -2.2
Ddx28Q9CWT6 Snord70-201ENSMUST00000104157 87 ntBASIC1.31□□□□□ -2.2
Ddx28Q9CWT6 Gm25390-201ENSMUST00000157341 103 ntBASIC1.31□□□□□ -2.2
Ddx28Q9CWT6 Gm23901-201ENSMUST00000157570 107 ntBASIC1.31□□□□□ -2.2
Ddx28Q9CWT6 Gm23584-201ENSMUST00000157655 129 ntBASIC1.31□□□□□ -2.2
Ddx28Q9CWT6 Gm23558-201ENSMUST00000157823 80 ntBASIC1.31□□□□□ -2.2
Ddx28Q9CWT6 Gm24902-201ENSMUST00000158126 123 ntBASIC1.31□□□□□ -2.2
Ddx28Q9CWT6 Gm22767-201ENSMUST00000158365 165 ntBASIC1.31□□□□□ -2.2
Ddx28Q9CWT6 Gm22164-201ENSMUST00000158413 106 ntBASIC1.31□□□□□ -2.2
Ddx28Q9CWT6 Gm25267-201ENSMUST00000158522 63 ntBASIC1.31□□□□□ -2.2
Ddx28Q9CWT6 Gm25831-201ENSMUST00000158924 163 ntBASIC1.31□□□□□ -2.2
Ddx28Q9CWT6 Gm22929-201ENSMUST00000175517 107 ntBASIC1.31□□□□□ -2.2
Ddx28Q9CWT6 Gm26426-201ENSMUST00000177866 123 ntBASIC1.31□□□□□ -2.2
Ddx28Q9CWT6 Gm26060-201ENSMUST00000180094 123 ntBASIC1.31□□□□□ -2.2
Ddx28Q9CWT6 Gm9251-201ENSMUST00000197202 628 ntBASIC1.31□□□□□ -2.2
Ddx28Q9CWT6 Gm45508-201ENSMUST00000209298 299 ntBASIC1.31□□□□□ -2.2
Ddx28Q9CWT6 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC1.31□□□□□ -2.2
Ddx28Q9CWT6 Gm26080-201ENSMUST00000104069 131 ntBASIC1.3□□□□□ -2.2
Ddx28Q9CWT6 Snord89-201ENSMUST00000104516 110 ntBASIC1.3□□□□□ -2.2
Ddx28Q9CWT6 Gm11856-201ENSMUST00000118712 276 ntBASIC1.3□□□□□ -2.2
Ddx28Q9CWT6 Gm25958-201ENSMUST00000175114 71 ntBASIC1.3□□□□□ -2.2
Ddx28Q9CWT6 Mir6350-201ENSMUST00000183639 105 ntBASIC1.3□□□□□ -2.2
Ddx28Q9CWT6 CT033781.2-201ENSMUST00000221113 153 ntBASIC1.3□□□□□ -2.2
Ddx28Q9CWT6 AC129085.1-201ENSMUST00000225263 165 ntBASIC1.3□□□□□ -2.2
Ddx28Q9CWT6 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.29□□□□□ -2.2
Ddx28Q9CWT6 Gm14838-201ENSMUST00000118913 248 ntBASIC1.29□□□□□ -2.2
Ddx28Q9CWT6 Gm23655-201ENSMUST00000122627 105 ntBASIC1.29□□□□□ -2.2
Ddx28Q9CWT6 Gm26279-201ENSMUST00000157095 102 ntBASIC1.29□□□□□ -2.2
Ddx28Q9CWT6 Gm23122-201ENSMUST00000157645 103 ntBASIC1.29□□□□□ -2.2
Ddx28Q9CWT6 Gm24729-201ENSMUST00000158225 137 ntBASIC1.29□□□□□ -2.2
Ddx28Q9CWT6 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC1.29□□□□□ -2.2
Ddx28Q9CWT6 Gm44921-201ENSMUST00000205290 301 ntBASIC1.29□□□□□ -2.2
Ddx28Q9CWT6 CT025689.3-201ENSMUST00000223817 301 ntBASIC1.29□□□□□ -2.2
Ddx28Q9CWT6 Gm25895-201ENSMUST00000083714 100 ntBASIC1.29□□□□□ -2.2
Ddx28Q9CWT6 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
Ddx28Q9CWT6 Gm14923-201ENSMUST00000118270 155 ntBASIC1.28□□□□□ -2.2
Ddx28Q9CWT6 Gm25558-201ENSMUST00000158083 106 ntBASIC1.28□□□□□ -2.2
Ddx28Q9CWT6 Gm25494-201ENSMUST00000158143 100 ntBASIC1.28□□□□□ -2.2
Ddx28Q9CWT6 Gm26038-201ENSMUST00000158151 106 ntBASIC1.28□□□□□ -2.2
Ddx28Q9CWT6 Gm26213-201ENSMUST00000158582 110 ntBASIC1.28□□□□□ -2.2
Ddx28Q9CWT6 Mir3087-201ENSMUST00000199405 56 ntBASIC1.28□□□□□ -2.2
Ddx28Q9CWT6 Gm16976-205ENSMUST00000227324 226 ntBASIC1.28□□□□□ -2.2
Ddx28Q9CWT6 Gm25636-201ENSMUST00000082666 133 ntBASIC1.28□□□□□ -2.2
Ddx28Q9CWT6 Gm22686-201ENSMUST00000082847 100 ntBASIC1.28□□□□□ -2.2
Ddx28Q9CWT6 Gm25482-201ENSMUST00000083225 107 ntBASIC1.28□□□□□ -2.2
Ddx28Q9CWT6 Gm24929-201ENSMUST00000083403 139 ntBASIC1.28□□□□□ -2.2
Ddx28Q9CWT6 Gm24762-201ENSMUST00000083689 104 ntBASIC1.28□□□□□ -2.2
Ddx28Q9CWT6 Gm24494-201ENSMUST00000083804 81 ntBASIC1.28□□□□□ -2.2
Ddx28Q9CWT6 Mir880-201ENSMUST00000104809 78 ntBASIC1.27□□□□□ -2.21
Ddx28Q9CWT6 Gm24640-201ENSMUST00000116949 126 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 210.5 ms