Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 AC154245.1-201ENSMUST00000224615 601 ntBASIC1.17□□□□□ -2.22
Smc1aQ9CU62 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
Smc1aQ9CU62 Gm10222-201ENSMUST00000088336 294 ntBASIC1.17□□□□□ -2.22
Smc1aQ9CU62 Gm22545-201ENSMUST00000104350 132 ntBASIC1.16□□□□□ -2.22
Smc1aQ9CU62 Gm25496-201ENSMUST00000104430 120 ntBASIC1.16□□□□□ -2.22
Smc1aQ9CU62 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
Smc1aQ9CU62 Gm22450-201ENSMUST00000179641 107 ntBASIC1.16□□□□□ -2.22
Smc1aQ9CU62 Gm25473-201ENSMUST00000180191 107 ntBASIC1.16□□□□□ -2.22
Smc1aQ9CU62 Gm27747-201ENSMUST00000184707 85 ntBASIC1.16□□□□□ -2.22
Smc1aQ9CU62 Gm42855-201ENSMUST00000197388 253 ntBASIC1.16□□□□□ -2.22
Smc1aQ9CU62 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
Smc1aQ9CU62 Gm24460-201ENSMUST00000082731 106 ntBASIC1.16□□□□□ -2.22
Smc1aQ9CU62 Gm24856-201ENSMUST00000082809 107 ntBASIC1.16□□□□□ -2.22
Smc1aQ9CU62 Gm26071-201ENSMUST00000083261 107 ntBASIC1.16□□□□□ -2.22
Smc1aQ9CU62 Gm24521-201ENSMUST00000083958 107 ntBASIC1.16□□□□□ -2.22
Smc1aQ9CU62 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC1.16□□□□□ -2.22
Smc1aQ9CU62 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC1.15□□□□□ -2.22
Smc1aQ9CU62 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
Smc1aQ9CU62 Mir875-201ENSMUST00000104698 78 ntBASIC1.15□□□□□ -2.23
Smc1aQ9CU62 Gm11792-201ENSMUST00000120640 168 ntBASIC1.15□□□□□ -2.23
Smc1aQ9CU62 Gm13560-201ENSMUST00000121865 329 ntBASIC1.15□□□□□ -2.23
Smc1aQ9CU62 Gm25664-201ENSMUST00000157697 107 ntBASIC1.15□□□□□ -2.23
Smc1aQ9CU62 Gm25044-201ENSMUST00000158603 104 ntBASIC1.15□□□□□ -2.23
Smc1aQ9CU62 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC1.15□□□□□ -2.23
Smc1aQ9CU62 Gm28921-201ENSMUST00000190219 378 ntBASIC1.15□□□□□ -2.23
Smc1aQ9CU62 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
Smc1aQ9CU62 Gm43563-201ENSMUST00000196761 198 ntBASIC1.15□□□□□ -2.23
Smc1aQ9CU62 Mir3970-201ENSMUST00000199287 90 ntBASIC1.15□□□□□ -2.23
Smc1aQ9CU62 Gm25697-201ENSMUST00000082902 98 ntBASIC1.15□□□□□ -2.23
Smc1aQ9CU62 Gm14536-201ENSMUST00000118324 138 ntBASIC1.14□□□□□ -2.23
Smc1aQ9CU62 Gm15027-201ENSMUST00000120922 138 ntBASIC1.14□□□□□ -2.23
Smc1aQ9CU62 Gm23893-201ENSMUST00000158106 134 ntBASIC1.14□□□□□ -2.23
Smc1aQ9CU62 Gm23581-201ENSMUST00000158531 63 ntBASIC1.14□□□□□ -2.23
Smc1aQ9CU62 Gm23194-201ENSMUST00000158813 105 ntBASIC1.14□□□□□ -2.23
Smc1aQ9CU62 Mir3471-1-201ENSMUST00000175139 131 ntBASIC1.14□□□□□ -2.23
Smc1aQ9CU62 Mir6540-201ENSMUST00000184886 108 ntBASIC1.14□□□□□ -2.23
Smc1aQ9CU62 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC1.14□□□□□ -2.23
Smc1aQ9CU62 AC124182.1-201ENSMUST00000227091 321 ntBASIC1.14□□□□□ -2.23
Smc1aQ9CU62 Gm25111-201ENSMUST00000116686 147 ntBASIC1.13□□□□□ -2.23
Smc1aQ9CU62 Mir6381-201ENSMUST00000183426 87 ntBASIC1.13□□□□□ -2.23
Smc1aQ9CU62 Gm24453-201ENSMUST00000083346 76 ntBASIC1.13□□□□□ -2.23
Smc1aQ9CU62 Gm25627-201ENSMUST00000084003 153 ntBASIC1.13□□□□□ -2.23
Smc1aQ9CU62 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
Smc1aQ9CU62 Gm14914-201ENSMUST00000117576 2031 ntBASIC1.13□□□□□ -2.23
Smc1aQ9CU62 Mir669l-201ENSMUST00000103771 98 ntBASIC1.12□□□□□ -2.23
Smc1aQ9CU62 Gm16032-201ENSMUST00000118534 168 ntBASIC1.12□□□□□ -2.23
Smc1aQ9CU62 Mir344d-3-201ENSMUST00000175458 80 ntBASIC1.12□□□□□ -2.23
Smc1aQ9CU62 Gm25024-201ENSMUST00000179667 104 ntBASIC1.12□□□□□ -2.23
Smc1aQ9CU62 Gm24020-201ENSMUST00000180156 108 ntBASIC1.12□□□□□ -2.23
Smc1aQ9CU62 Gm27420-201ENSMUST00000183823 79 ntBASIC1.12□□□□□ -2.23
Smc1aQ9CU62 AC125374.2-201ENSMUST00000214278 162 ntBASIC1.12□□□□□ -2.23
Smc1aQ9CU62 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC1.12□□□□□ -2.23
Smc1aQ9CU62 CT954323.1-201ENSMUST00000222774 229 ntBASIC1.12□□□□□ -2.23
Smc1aQ9CU62 Gm23299-201ENSMUST00000082708 79 ntBASIC1.12□□□□□ -2.23
Smc1aQ9CU62 Gm23451-201ENSMUST00000083328 122 ntBASIC1.12□□□□□ -2.23
Smc1aQ9CU62 Mir27b-201ENSMUST00000083541 73 ntBASIC1.12□□□□□ -2.23
Smc1aQ9CU62 Gm22784-201ENSMUST00000104088 132 ntBASIC1.11□□□□□ -2.23
Smc1aQ9CU62 Gm12797-201ENSMUST00000118645 273 ntBASIC1.11□□□□□ -2.23
Smc1aQ9CU62 Gm26287-201ENSMUST00000158887 81 ntBASIC1.11□□□□□ -2.23
Smc1aQ9CU62 Gm23571-201ENSMUST00000180073 127 ntBASIC1.11□□□□□ -2.23
Smc1aQ9CU62 Gm20118-201ENSMUST00000187207 162 ntBASIC1.11□□□□□ -2.23
Smc1aQ9CU62 CT010454.1-201ENSMUST00000225975 265 ntBASIC1.11□□□□□ -2.23
Smc1aQ9CU62 Snora19-201ENSMUST00000082962 132 ntBASIC1.11□□□□□ -2.23
Smc1aQ9CU62 Gm23658-201ENSMUST00000083233 132 ntBASIC1.11□□□□□ -2.23
Smc1aQ9CU62 Mir10b-201ENSMUST00000083566 68 ntBASIC1.11□□□□□ -2.23
Smc1aQ9CU62 Gm23898-201ENSMUST00000158111 103 ntBASIC1.1□□□□□ -2.23
Smc1aQ9CU62 Gm25750-201ENSMUST00000175483 112 ntBASIC1.1□□□□□ -2.23
Smc1aQ9CU62 Gm29022-201ENSMUST00000190702 225 ntBASIC1.1□□□□□ -2.23
Smc1aQ9CU62 AC154994.1-201ENSMUST00000217395 302 ntBASIC1.1□□□□□ -2.23
Smc1aQ9CU62 Gm23679-201ENSMUST00000083161 119 ntBASIC1.1□□□□□ -2.23
Smc1aQ9CU62 Mir34a-201ENSMUST00000083559 102 ntBASIC1.1□□□□□ -2.23
Smc1aQ9CU62 Gm25683-201ENSMUST00000083940 131 ntBASIC1.1□□□□□ -2.23
Smc1aQ9CU62 Mir490-201ENSMUST00000093567 84 ntBASIC1.1□□□□□ -2.23
Smc1aQ9CU62 Gm24423-201ENSMUST00000101982 106 ntBASIC1.09□□□□□ -2.23
Smc1aQ9CU62 Gm23665-201ENSMUST00000158054 62 ntBASIC1.09□□□□□ -2.23
Smc1aQ9CU62 Gm24392-201ENSMUST00000158136 103 ntBASIC1.09□□□□□ -2.23
Smc1aQ9CU62 Gm24667-201ENSMUST00000158938 103 ntBASIC1.09□□□□□ -2.23
Smc1aQ9CU62 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC1.09□□□□□ -2.23
Smc1aQ9CU62 Gm28344-201ENSMUST00000185704 279 ntBASIC1.09□□□□□ -2.23
Smc1aQ9CU62 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC1.09□□□□□ -2.23
Smc1aQ9CU62 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
Smc1aQ9CU62 Gm14792-201ENSMUST00000119725 258 ntBASIC1.08□□□□□ -2.24
Smc1aQ9CU62 Gm11334-201ENSMUST00000121969 156 ntBASIC1.08□□□□□ -2.24
Smc1aQ9CU62 Gm24909-201ENSMUST00000157290 280 ntBASIC1.08□□□□□ -2.24
Smc1aQ9CU62 Gm23113-201ENSMUST00000158477 99 ntBASIC1.08□□□□□ -2.24
Smc1aQ9CU62 Gm44977-201ENSMUST00000205283 420 ntBASIC1.08□□□□□ -2.24
Smc1aQ9CU62 Mir22-201ENSMUST00000083595 95 ntBASIC1.08□□□□□ -2.24
Smc1aQ9CU62 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
Smc1aQ9CU62 Gm24431-201ENSMUST00000104073 66 ntBASIC1.07□□□□□ -2.24
Smc1aQ9CU62 Gm24375-201ENSMUST00000104397 132 ntBASIC1.07□□□□□ -2.24
Smc1aQ9CU62 Gm11388-201ENSMUST00000120908 159 ntBASIC1.07□□□□□ -2.24
Smc1aQ9CU62 Gm22802-201ENSMUST00000175621 89 ntBASIC1.07□□□□□ -2.24
Smc1aQ9CU62 Gm25235-201ENSMUST00000179933 107 ntBASIC1.07□□□□□ -2.24
Smc1aQ9CU62 Mir6380-201ENSMUST00000184334 81 ntBASIC1.07□□□□□ -2.24
Smc1aQ9CU62 Gm27545-201ENSMUST00000184755 202 ntBASIC1.07□□□□□ -2.24
Smc1aQ9CU62 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC1.07□□□□□ -2.24
Smc1aQ9CU62 Gm22884-201ENSMUST00000083127 140 ntBASIC1.07□□□□□ -2.24
Smc1aQ9CU62 Gm25650-201ENSMUST00000083784 162 ntBASIC1.07□□□□□ -2.24
Smc1aQ9CU62 Gm43877-201ENSMUST00000205029 2238 ntBASIC1.06□□□□□ -2.24
Smc1aQ9CU62 Gm23991-201ENSMUST00000117033 93 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 76,532 protein–RNA pairs in 145.1 ms