Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC0.42□□□□□ -2.34
RTRAFQ9CQE8 Gm12924-201ENSMUST00000121747 318 ntBASIC0.41□□□□□ -2.34
RTRAFQ9CQE8 Gm22080-201ENSMUST00000157591 106 ntBASIC0.41□□□□□ -2.34
RTRAFQ9CQE8 Gm26159-201ENSMUST00000158968 104 ntBASIC0.41□□□□□ -2.34
RTRAFQ9CQE8 Gm27289-201ENSMUST00000183341 82 ntBASIC0.41□□□□□ -2.34
RTRAFQ9CQE8 Gm27898-201ENSMUST00000183987 80 ntBASIC0.41□□□□□ -2.34
RTRAFQ9CQE8 Gm29512-201ENSMUST00000185544 315 ntBASIC0.41□□□□□ -2.34
RTRAFQ9CQE8 Gm37313-201ENSMUST00000191673 290 ntBASIC0.41□□□□□ -2.34
RTRAFQ9CQE8 Gm44488-201ENSMUST00000199467 119 ntBASIC0.41□□□□□ -2.34
RTRAFQ9CQE8 Gm44052-201ENSMUST00000203382 396 ntBASIC0.41□□□□□ -2.34
RTRAFQ9CQE8 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC0.41□□□□□ -2.34
RTRAFQ9CQE8 Gm25878-201ENSMUST00000104327 93 ntBASIC0.4□□□□□ -2.35
RTRAFQ9CQE8 Gm26479-201ENSMUST00000122620 106 ntBASIC0.4□□□□□ -2.35
RTRAFQ9CQE8 Gm26415-201ENSMUST00000157673 292 ntBASIC0.4□□□□□ -2.35
RTRAFQ9CQE8 Gm24634-201ENSMUST00000158672 107 ntBASIC0.4□□□□□ -2.35
RTRAFQ9CQE8 Gm28418-201ENSMUST00000186179 423 ntBASIC0.4□□□□□ -2.35
RTRAFQ9CQE8 Gm29140-201ENSMUST00000190187 476 ntBASIC0.4□□□□□ -2.35
RTRAFQ9CQE8 Gm38183-201ENSMUST00000193189 205 ntBASIC0.4□□□□□ -2.35
RTRAFQ9CQE8 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC0.4□□□□□ -2.35
RTRAFQ9CQE8 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC0.4□□□□□ -2.35
RTRAFQ9CQE8 AC192333.1-201ENSMUST00000224573 376 ntBASIC0.4□□□□□ -2.35
RTRAFQ9CQE8 AC129085.1-201ENSMUST00000225263 165 ntBASIC0.4□□□□□ -2.35
RTRAFQ9CQE8 Snora20-201ENSMUST00000082703 128 ntBASIC0.4□□□□□ -2.35
RTRAFQ9CQE8 Gm25793-201ENSMUST00000083287 107 ntBASIC0.4□□□□□ -2.35
RTRAFQ9CQE8 Mir500-201ENSMUST00000093600 92 ntBASIC0.4□□□□□ -2.35
RTRAFQ9CQE8 Gm25378-201ENSMUST00000104333 129 ntBASIC0.39□□□□□ -2.35
RTRAFQ9CQE8 Gm16265-201ENSMUST00000134558 108 ntBASIC0.39□□□□□ -2.35
RTRAFQ9CQE8 Gm23328-201ENSMUST00000157418 132 ntBASIC0.39□□□□□ -2.35
RTRAFQ9CQE8 Mir6364-201ENSMUST00000183396 86 ntBASIC0.39□□□□□ -2.35
RTRAFQ9CQE8 Gm44057-201ENSMUST00000204547 96 ntBASIC0.39□□□□□ -2.35
RTRAFQ9CQE8 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC0.39□□□□□ -2.35
RTRAFQ9CQE8 AC158598.2-201ENSMUST00000213397 3832 ntBASIC0.39□□□□□ -2.35
RTRAFQ9CQE8 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.38□□□□□ -2.35
RTRAFQ9CQE8 Gm25715-201ENSMUST00000158627 125 ntBASIC0.38□□□□□ -2.35
RTRAFQ9CQE8 Gm23024-201ENSMUST00000158770 292 ntBASIC0.38□□□□□ -2.35
RTRAFQ9CQE8 Gm23267-201ENSMUST00000178490 132 ntBASIC0.38□□□□□ -2.35
RTRAFQ9CQE8 Gm23571-201ENSMUST00000180073 127 ntBASIC0.38□□□□□ -2.35
RTRAFQ9CQE8 Mir3569-201ENSMUST00000185080 58 ntBASIC0.38□□□□□ -2.35
RTRAFQ9CQE8 Gm43505-201ENSMUST00000200579 139 ntBASIC0.38□□□□□ -2.35
RTRAFQ9CQE8 Gm45005-201ENSMUST00000206640 157 ntBASIC0.38□□□□□ -2.35
RTRAFQ9CQE8 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC0.38□□□□□ -2.35
RTRAFQ9CQE8 Gm25636-201ENSMUST00000082666 133 ntBASIC0.38□□□□□ -2.35
RTRAFQ9CQE8 Gm24453-201ENSMUST00000083346 76 ntBASIC0.38□□□□□ -2.35
RTRAFQ9CQE8 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC0.37□□□□□ -2.35
RTRAFQ9CQE8 Gm25938-201ENSMUST00000104139 166 ntBASIC0.37□□□□□ -2.35
RTRAFQ9CQE8 Gm12432-201ENSMUST00000119540 186 ntBASIC0.37□□□□□ -2.35
RTRAFQ9CQE8 Gm13801-201ENSMUST00000120750 160 ntBASIC0.37□□□□□ -2.35
RTRAFQ9CQE8 Gm22482-201ENSMUST00000122563 359 ntBASIC0.37□□□□□ -2.35
RTRAFQ9CQE8 Gm23230-201ENSMUST00000157298 133 ntBASIC0.37□□□□□ -2.35
RTRAFQ9CQE8 Gm26484-201ENSMUST00000158018 106 ntBASIC0.37□□□□□ -2.35
RTRAFQ9CQE8 Gm23967-201ENSMUST00000175062 78 ntBASIC0.37□□□□□ -2.35
RTRAFQ9CQE8 Mir5624-201ENSMUST00000176635 61 ntBASIC0.37□□□□□ -2.35
RTRAFQ9CQE8 Gm22450-201ENSMUST00000179641 107 ntBASIC0.37□□□□□ -2.35
RTRAFQ9CQE8 Gm25473-201ENSMUST00000180191 107 ntBASIC0.37□□□□□ -2.35
RTRAFQ9CQE8 Tmsb15b2-202ENSMUST00000180194 243 ntAPPRIS P1 TSL 3 BASIC0.37□□□□□ -2.35
RTRAFQ9CQE8 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC0.37□□□□□ -2.35
RTRAFQ9CQE8 Gm45544-201ENSMUST00000211130 88 ntBASIC0.37□□□□□ -2.35
RTRAFQ9CQE8 CT009696.1-201ENSMUST00000215745 256 ntBASIC0.37□□□□□ -2.35
RTRAFQ9CQE8 AC166341.3-201ENSMUST00000221861 114 ntBASIC0.37□□□□□ -2.35
RTRAFQ9CQE8 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.37□□□□□ -2.35
RTRAFQ9CQE8 Gm24856-201ENSMUST00000082809 107 ntBASIC0.37□□□□□ -2.35
RTRAFQ9CQE8 Gm26071-201ENSMUST00000083261 107 ntBASIC0.37□□□□□ -2.35
RTRAFQ9CQE8 Gm24616-201ENSMUST00000083274 139 ntBASIC0.37□□□□□ -2.35
RTRAFQ9CQE8 Mir196b-201ENSMUST00000083509 85 ntBASIC0.37□□□□□ -2.35
RTRAFQ9CQE8 Mir30c-2-201ENSMUST00000083633 84 ntBASIC0.37□□□□□ -2.35
RTRAFQ9CQE8 Gm24521-201ENSMUST00000083958 107 ntBASIC0.37□□□□□ -2.35
RTRAFQ9CQE8 Gm43960-201ENSMUST00000204249 5020 ntBASIC0.36□□□□□ -2.35
RTRAFQ9CQE8 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
RTRAFQ9CQE8 Gm25506-201ENSMUST00000104339 70 ntBASIC0.36□□□□□ -2.35
RTRAFQ9CQE8 Gm26303-201ENSMUST00000116845 119 ntBASIC0.36□□□□□ -2.35
RTRAFQ9CQE8 Gm14919-201ENSMUST00000120839 390 ntBASIC0.36□□□□□ -2.35
RTRAFQ9CQE8 Gm15213-201ENSMUST00000122098 216 ntBASIC0.36□□□□□ -2.35
RTRAFQ9CQE8 Gm26090-201ENSMUST00000157897 128 ntBASIC0.36□□□□□ -2.35
RTRAFQ9CQE8 Gm22522-201ENSMUST00000158271 151 ntBASIC0.36□□□□□ -2.35
RTRAFQ9CQE8 Gm23763-201ENSMUST00000158345 60 ntBASIC0.36□□□□□ -2.35
RTRAFQ9CQE8 Gm23760-201ENSMUST00000158350 116 ntBASIC0.36□□□□□ -2.35
RTRAFQ9CQE8 Mir7663-201ENSMUST00000183950 61 ntBASIC0.36□□□□□ -2.35
RTRAFQ9CQE8 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC0.36□□□□□ -2.35
RTRAFQ9CQE8 Mir7059-201ENSMUST00000184825 59 ntBASIC0.36□□□□□ -2.35
RTRAFQ9CQE8 Gm42594-201ENSMUST00000199511 246 ntBASIC0.36□□□□□ -2.35
RTRAFQ9CQE8 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC0.36□□□□□ -2.35
RTRAFQ9CQE8 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC0.36□□□□□ -2.35
RTRAFQ9CQE8 Gm44858-201ENSMUST00000207360 154 ntBASIC0.36□□□□□ -2.35
RTRAFQ9CQE8 AC154552.1-201ENSMUST00000222969 202 ntBASIC0.36□□□□□ -2.35
RTRAFQ9CQE8 Gm25138-201ENSMUST00000083248 136 ntBASIC0.36□□□□□ -2.35
RTRAFQ9CQE8 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC0.36□□□□□ -2.35
RTRAFQ9CQE8 Gm23941-201ENSMUST00000101953 107 ntBASIC0.35□□□□□ -2.35
RTRAFQ9CQE8 Gm14671-201ENSMUST00000121790 262 ntBASIC0.35□□□□□ -2.35
RTRAFQ9CQE8 Gm22553-201ENSMUST00000157797 295 ntBASIC0.35□□□□□ -2.35
RTRAFQ9CQE8 Gm22448-201ENSMUST00000179254 107 ntBASIC0.35□□□□□ -2.35
RTRAFQ9CQE8 Gm43432-201ENSMUST00000196352 121 ntBASIC0.35□□□□□ -2.35
RTRAFQ9CQE8 Mir547-201ENSMUST00000102051 78 ntBASIC0.34□□□□□ -2.36
RTRAFQ9CQE8 Gm25875-201ENSMUST00000104323 107 ntBASIC0.34□□□□□ -2.36
RTRAFQ9CQE8 Gm11420-201ENSMUST00000120047 402 ntBASIC0.34□□□□□ -2.36
RTRAFQ9CQE8 Gm22586-201ENSMUST00000157507 122 ntBASIC0.34□□□□□ -2.36
RTRAFQ9CQE8 Gm25664-201ENSMUST00000157697 107 ntBASIC0.34□□□□□ -2.36
RTRAFQ9CQE8 Gm25044-201ENSMUST00000158603 104 ntBASIC0.34□□□□□ -2.36
RTRAFQ9CQE8 Gm22118-201ENSMUST00000175593 171 ntBASIC0.34□□□□□ -2.36
RTRAFQ9CQE8 Mir6540-201ENSMUST00000184886 108 ntBASIC0.34□□□□□ -2.36
RTRAFQ9CQE8 Gm38060-201ENSMUST00000194822 464 ntBASIC0.34□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 225.9 ms