Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC0□□□□□ -2.41
Rpa3Q9CQ71 Gm43367-201ENSMUST00000199986 625 ntBASIC0□□□□□ -2.41
Rpa3Q9CQ71 Gm3702-201ENSMUST00000211754 346 ntBASIC0□□□□□ -2.41
Rpa3Q9CQ71 Olfr1139-ps1-201ENSMUST00000217634 168 ntBASIC0□□□□□ -2.41
Rpa3Q9CQ71 CT010454.1-201ENSMUST00000225975 265 ntBASIC0□□□□□ -2.41
Rpa3Q9CQ71 Gm25703-201ENSMUST00000083123 151 ntBASIC0□□□□□ -2.41
Rpa3Q9CQ71 Gm3867-201ENSMUST00000086108 279 ntBASIC0□□□□□ -2.41
Rpa3Q9CQ71 Gm26329-201ENSMUST00000093723 110 ntBASIC0□□□□□ -2.41
Rpa3Q9CQ71 Gm10730-201ENSMUST00000194097 2723 ntBASIC-0□□□□□ -2.41
Rpa3Q9CQ71 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC-0.01□□□□□ -2.41
Rpa3Q9CQ71 Gm24500-201ENSMUST00000158447 124 ntBASIC-0.01□□□□□ -2.41
Rpa3Q9CQ71 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC-0.01□□□□□ -2.41
Rpa3Q9CQ71 Gm44055-201ENSMUST00000204376 247 ntBASIC-0.01□□□□□ -2.41
Rpa3Q9CQ71 AC122769.2-201ENSMUST00000227248 302 ntBASIC-0.01□□□□□ -2.41
Rpa3Q9CQ71 Snord95-201ENSMUST00000082846 68 ntBASIC-0.01□□□□□ -2.41
Rpa3Q9CQ71 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC-0.02□□□□□ -2.41
Rpa3Q9CQ71 Gm11522-201ENSMUST00000120533 176 ntBASIC-0.02□□□□□ -2.41
Rpa3Q9CQ71 Gm13720-201ENSMUST00000120741 196 ntBASIC-0.02□□□□□ -2.41
Rpa3Q9CQ71 Gm25882-201ENSMUST00000157784 85 ntBASIC-0.02□□□□□ -2.41
Rpa3Q9CQ71 Gm22520-201ENSMUST00000158269 129 ntBASIC-0.02□□□□□ -2.41
Rpa3Q9CQ71 Gm28669-201ENSMUST00000188400 100 ntBASIC-0.02□□□□□ -2.41
Rpa3Q9CQ71 Gm44457-201ENSMUST00000198109 76 ntBASIC-0.02□□□□□ -2.41
Rpa3Q9CQ71 AC166358.7-201ENSMUST00000221132 108 ntBASIC-0.02□□□□□ -2.41
Rpa3Q9CQ71 AC125543.5-201ENSMUST00000222799 108 ntBASIC-0.02□□□□□ -2.41
Rpa3Q9CQ71 Mir196a-2-201ENSMUST00000083554 85 ntBASIC-0.02□□□□□ -2.41
Rpa3Q9CQ71 Gm23851-201ENSMUST00000083831 103 ntBASIC-0.02□□□□□ -2.41
Rpa3Q9CQ71 Gm25496-201ENSMUST00000104430 120 ntBASIC-0.03□□□□□ -2.41
Rpa3Q9CQ71 Gm26393-201ENSMUST00000157625 129 ntBASIC-0.03□□□□□ -2.41
Rpa3Q9CQ71 Gm24847-201ENSMUST00000158032 108 ntBASIC-0.03□□□□□ -2.41
Rpa3Q9CQ71 Gm24549-201ENSMUST00000158647 139 ntBASIC-0.03□□□□□ -2.41
Rpa3Q9CQ71 Gm24547-201ENSMUST00000158649 149 ntBASIC-0.03□□□□□ -2.41
Rpa3Q9CQ71 Gm23821-201ENSMUST00000158738 106 ntBASIC-0.03□□□□□ -2.41
Rpa3Q9CQ71 Gm16307-201ENSMUST00000161269 210 ntBASIC-0.03□□□□□ -2.41
Rpa3Q9CQ71 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC-0.03□□□□□ -2.41
Rpa3Q9CQ71 Gm25078-201ENSMUST00000082530 107 ntBASIC-0.03□□□□□ -2.41
Rpa3Q9CQ71 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC-0.03□□□□□ -2.41
Rpa3Q9CQ71 Gm25110-201ENSMUST00000116684 121 ntBASIC-0.04□□□□□ -2.42
Rpa3Q9CQ71 Gm25775-201ENSMUST00000116716 121 ntBASIC-0.04□□□□□ -2.42
Rpa3Q9CQ71 Gm24795-201ENSMUST00000116737 121 ntBASIC-0.04□□□□□ -2.42
Rpa3Q9CQ71 Gm25171-201ENSMUST00000116926 121 ntBASIC-0.04□□□□□ -2.42
Rpa3Q9CQ71 Gm25044-201ENSMUST00000158603 104 ntBASIC-0.04□□□□□ -2.42
Rpa3Q9CQ71 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC-0.04□□□□□ -2.42
Rpa3Q9CQ71 Gm25671-201ENSMUST00000178612 105 ntBASIC-0.04□□□□□ -2.42
Rpa3Q9CQ71 Gm23307-201ENSMUST00000179167 105 ntBASIC-0.04□□□□□ -2.42
Rpa3Q9CQ71 Gm25286-201ENSMUST00000179790 105 ntBASIC-0.04□□□□□ -2.42
Rpa3Q9CQ71 Gm27980-201ENSMUST00000184094 169 ntBASIC-0.04□□□□□ -2.42
Rpa3Q9CQ71 AC136457.1-201ENSMUST00000224195 156 ntBASIC-0.04□□□□□ -2.42
Rpa3Q9CQ71 Gm43885-201ENSMUST00000204928 2542 ntBASIC-0.04□□□□□ -2.42
Rpa3Q9CQ71 Gm23989-201ENSMUST00000117030 66 ntBASIC-0.05□□□□□ -2.42
Rpa3Q9CQ71 Gm23101-201ENSMUST00000157550 137 ntBASIC-0.05□□□□□ -2.42
Rpa3Q9CQ71 Gm24772-201ENSMUST00000158507 110 ntBASIC-0.05□□□□□ -2.42
Rpa3Q9CQ71 Mir8107-201ENSMUST00000184024 117 ntBASIC-0.05□□□□□ -2.42
Rpa3Q9CQ71 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC-0.05□□□□□ -2.42
Rpa3Q9CQ71 AC154484.1-201ENSMUST00000227311 771 ntBASIC-0.05□□□□□ -2.42
Rpa3Q9CQ71 Mir496a-201ENSMUST00000093627 79 ntBASIC-0.05□□□□□ -2.42
Rpa3Q9CQ71 Gm26090-201ENSMUST00000157897 128 ntBASIC-0.06□□□□□ -2.42
Rpa3Q9CQ71 Gm23783-201ENSMUST00000157941 102 ntBASIC-0.06□□□□□ -2.42
Rpa3Q9CQ71 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC-0.06□□□□□ -2.42
Rpa3Q9CQ71 Gm25450-201ENSMUST00000179144 107 ntBASIC-0.06□□□□□ -2.42
Rpa3Q9CQ71 Gm28330-201ENSMUST00000190353 171 ntBASIC-0.06□□□□□ -2.42
Rpa3Q9CQ71 Gm36946-201ENSMUST00000192706 435 ntBASIC-0.06□□□□□ -2.42
Rpa3Q9CQ71 Gm45544-201ENSMUST00000211130 88 ntBASIC-0.06□□□□□ -2.42
Rpa3Q9CQ71 Snora20-201ENSMUST00000082703 128 ntBASIC-0.06□□□□□ -2.42
Rpa3Q9CQ71 Gm22368-201ENSMUST00000102416 109 ntBASIC-0.07□□□□□ -2.42
Rpa3Q9CQ71 Gm24555-201ENSMUST00000104548 124 ntBASIC-0.07□□□□□ -2.42
Rpa3Q9CQ71 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC-0.07□□□□□ -2.42
Rpa3Q9CQ71 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC-0.07□□□□□ -2.42
Rpa3Q9CQ71 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC-0.07□□□□□ -2.42
Rpa3Q9CQ71 Cfap61-214ENSMUST00000167179 183 ntBASIC-0.07□□□□□ -2.42
Rpa3Q9CQ71 Gm22466-201ENSMUST00000175278 69 ntBASIC-0.07□□□□□ -2.42
Rpa3Q9CQ71 Mir7010-201ENSMUST00000183464 63 ntBASIC-0.07□□□□□ -2.42
Rpa3Q9CQ71 Mir7079-201ENSMUST00000184697 69 ntBASIC-0.07□□□□□ -2.42
Rpa3Q9CQ71 Gm38208-201ENSMUST00000192476 114 ntBASIC-0.07□□□□□ -2.42
Rpa3Q9CQ71 Mir376a-201ENSMUST00000197584 68 ntBASIC-0.07□□□□□ -2.42
Rpa3Q9CQ71 Mir200a-201ENSMUST00000083466 90 ntBASIC-0.07□□□□□ -2.42
Rpa3Q9CQ71 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC-0.08□□□□□ -2.42
Rpa3Q9CQ71 Gm22598-201ENSMUST00000157600 127 ntBASIC-0.08□□□□□ -2.42
Rpa3Q9CQ71 Mir382-201ENSMUST00000083494 76 ntBASIC-0.08□□□□□ -2.42
Rpa3Q9CQ71 Gm13518-201ENSMUST00000120018 233 ntBASIC-0.09□□□□□ -2.42
Rpa3Q9CQ71 Gm22887-201ENSMUST00000178586 107 ntBASIC-0.09□□□□□ -2.42
Rpa3Q9CQ71 Mir6350-201ENSMUST00000183639 105 ntBASIC-0.09□□□□□ -2.42
Rpa3Q9CQ71 Gm27755-201ENSMUST00000184623 132 ntBASIC-0.09□□□□□ -2.42
Rpa3Q9CQ71 Mir465d-201ENSMUST00000196314 58 ntBASIC-0.09□□□□□ -2.42
Rpa3Q9CQ71 Mir7229-201ENSMUST00000197062 53 ntBASIC-0.09□□□□□ -2.42
Rpa3Q9CQ71 Gm44057-201ENSMUST00000204547 96 ntBASIC-0.09□□□□□ -2.42
Rpa3Q9CQ71 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC-0.09□□□□□ -2.42
Rpa3Q9CQ71 Snord82-201ENSMUST00000082889 70 ntBASIC-0.09□□□□□ -2.42
Rpa3Q9CQ71 Mir411-201ENSMUST00000083543 82 ntBASIC-0.09□□□□□ -2.42
Rpa3Q9CQ71 Gm23060-201ENSMUST00000102345 109 ntBASIC-0.1□□□□□ -2.43
Rpa3Q9CQ71 Gm22199-201ENSMUST00000122660 126 ntBASIC-0.1□□□□□ -2.43
Rpa3Q9CQ71 Gm22791-201ENSMUST00000157232 145 ntBASIC-0.1□□□□□ -2.43
Rpa3Q9CQ71 Gm22077-201ENSMUST00000157594 93 ntBASIC-0.1□□□□□ -2.43
Rpa3Q9CQ71 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC-0.1□□□□□ -2.43
Rpa3Q9CQ71 Gm28001-201ENSMUST00000183561 117 ntBASIC-0.1□□□□□ -2.43
Rpa3Q9CQ71 Gm44345-201ENSMUST00000199560 135 ntBASIC-0.1□□□□□ -2.43
Rpa3Q9CQ71 Gm26107-201ENSMUST00000083972 107 ntBASIC-0.1□□□□□ -2.43
Rpa3Q9CQ71 Mir547-201ENSMUST00000102051 78 ntBASIC-0.11□□□□□ -2.43
Rpa3Q9CQ71 Gm11904-201ENSMUST00000120562 248 ntBASIC-0.11□□□□□ -2.43
Rpa3Q9CQ71 Gm26415-201ENSMUST00000157673 292 ntBASIC-0.11□□□□□ -2.43
Rpa3Q9CQ71 Gm26400-201ENSMUST00000175012 85 ntBASIC-0.11□□□□□ -2.43
Retrieved 100 of 76,532 protein–RNA pairs in 244.2 ms