Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Mir542-201ENSMUST00000102186 85 ntBASIC2.77□□□□□ -1.97
Rpa1Q8VEE4 Gm12013-201ENSMUST00000121971 155 ntBASIC2.77□□□□□ -1.97
Rpa1Q8VEE4 n-R5s187-201ENSMUST00000122769 111 ntBASIC2.77□□□□□ -1.97
Rpa1Q8VEE4 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC2.77□□□□□ -1.97
Rpa1Q8VEE4 Gm27446-201ENSMUST00000183963 89 ntBASIC2.77□□□□□ -1.97
Rpa1Q8VEE4 AC167721.1-201ENSMUST00000217088 279 ntBASIC2.77□□□□□ -1.97
Rpa1Q8VEE4 Gm16976-205ENSMUST00000227324 226 ntBASIC2.77□□□□□ -1.97
Rpa1Q8VEE4 Gm23264-201ENSMUST00000083372 107 ntBASIC2.77□□□□□ -1.97
Rpa1Q8VEE4 Mir300-201ENSMUST00000083485 79 ntBASIC2.77□□□□□ -1.97
Rpa1Q8VEE4 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Rpa1Q8VEE4 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Rpa1Q8VEE4 Gm15272-201ENSMUST00000120865 233 ntBASIC2.76□□□□□ -1.97
Rpa1Q8VEE4 n-R5s73-201ENSMUST00000122508 107 ntBASIC2.76□□□□□ -1.97
Rpa1Q8VEE4 Gm23656-201ENSMUST00000122626 112 ntBASIC2.76□□□□□ -1.97
Rpa1Q8VEE4 Gm24443-201ENSMUST00000157242 132 ntBASIC2.76□□□□□ -1.97
Rpa1Q8VEE4 Gm22888-201ENSMUST00000158640 77 ntBASIC2.76□□□□□ -1.97
Rpa1Q8VEE4 Gm20477-201ENSMUST00000174028 280 ntBASIC2.76□□□□□ -1.97
Rpa1Q8VEE4 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC2.76□□□□□ -1.97
Rpa1Q8VEE4 Mir547-201ENSMUST00000102051 78 ntBASIC2.75□□□□□ -1.97
Rpa1Q8VEE4 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Rpa1Q8VEE4 Gm22939-201ENSMUST00000103958 131 ntBASIC2.75□□□□□ -1.97
Rpa1Q8VEE4 Gm25091-201ENSMUST00000103997 71 ntBASIC2.75□□□□□ -1.97
Rpa1Q8VEE4 Gm22782-201ENSMUST00000104082 132 ntBASIC2.75□□□□□ -1.97
Rpa1Q8VEE4 Gm24127-201ENSMUST00000104110 130 ntBASIC2.75□□□□□ -1.97
Rpa1Q8VEE4 Gm22486-201ENSMUST00000116815 137 ntBASIC2.75□□□□□ -1.97
Rpa1Q8VEE4 Gm22070-201ENSMUST00000178475 107 ntBASIC2.75□□□□□ -1.97
Rpa1Q8VEE4 Gm37104-201ENSMUST00000193278 196 ntBASIC2.75□□□□□ -1.97
Rpa1Q8VEE4 Gm18346-201ENSMUST00000216782 325 ntBASIC2.75□□□□□ -1.97
Rpa1Q8VEE4 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Rpa1Q8VEE4 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Rpa1Q8VEE4 BC022960-201ENSMUST00000119987 1815 ntBASIC2.75□□□□□ -1.97
Rpa1Q8VEE4 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Rpa1Q8VEE4 Gm25308-201ENSMUST00000104171 158 ntBASIC2.74□□□□□ -1.97
Rpa1Q8VEE4 Gm12309-201ENSMUST00000119889 182 ntBASIC2.74□□□□□ -1.97
Rpa1Q8VEE4 Gm7209-201ENSMUST00000122339 333 ntBASIC2.74□□□□□ -1.97
Rpa1Q8VEE4 Gm14389-201ENSMUST00000140453 241 ntBASIC2.74□□□□□ -1.97
Rpa1Q8VEE4 Gm22999-201ENSMUST00000157082 88 ntBASIC2.74□□□□□ -1.97
Rpa1Q8VEE4 Gm24250-201ENSMUST00000157320 135 ntBASIC2.74□□□□□ -1.97
Rpa1Q8VEE4 Gm23770-201ENSMUST00000178009 108 ntBASIC2.74□□□□□ -1.97
Rpa1Q8VEE4 Gm22832-201ENSMUST00000178022 108 ntBASIC2.74□□□□□ -1.97
Rpa1Q8VEE4 Gm23863-201ENSMUST00000178265 108 ntBASIC2.74□□□□□ -1.97
Rpa1Q8VEE4 Gm24828-201ENSMUST00000178507 108 ntBASIC2.74□□□□□ -1.97
Rpa1Q8VEE4 Gm23052-201ENSMUST00000178633 108 ntBASIC2.74□□□□□ -1.97
Rpa1Q8VEE4 Gm25729-201ENSMUST00000179050 108 ntBASIC2.74□□□□□ -1.97
Rpa1Q8VEE4 Gm25359-201ENSMUST00000179315 108 ntBASIC2.74□□□□□ -1.97
Rpa1Q8VEE4 Gm22624-201ENSMUST00000179913 108 ntBASIC2.74□□□□□ -1.97
Rpa1Q8VEE4 Mir6386-201ENSMUST00000183558 104 ntBASIC2.74□□□□□ -1.97
Rpa1Q8VEE4 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC2.74□□□□□ -1.97
Rpa1Q8VEE4 Gm26168-201ENSMUST00000083787 112 ntBASIC2.74□□□□□ -1.97
Rpa1Q8VEE4 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
Rpa1Q8VEE4 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
Rpa1Q8VEE4 Gm3081-201ENSMUST00000193413 3025 ntBASIC2.73□□□□□ -1.97
Rpa1Q8VEE4 Snora36b-201ENSMUST00000104383 132 ntBASIC2.73□□□□□ -1.97
Rpa1Q8VEE4 Gm24138-201ENSMUST00000157572 114 ntBASIC2.73□□□□□ -1.97
Rpa1Q8VEE4 Gm24681-201ENSMUST00000158760 107 ntBASIC2.73□□□□□ -1.97
Rpa1Q8VEE4 Gm26004-201ENSMUST00000158804 116 ntBASIC2.73□□□□□ -1.97
Rpa1Q8VEE4 Gm24082-201ENSMUST00000175175 83 ntBASIC2.73□□□□□ -1.97
Rpa1Q8VEE4 Gm26073-201ENSMUST00000179906 127 ntBASIC2.73□□□□□ -1.97
Rpa1Q8VEE4 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
Rpa1Q8VEE4 Gm45178-201ENSMUST00000207744 4110 ntBASIC2.73□□□□□ -1.97
Rpa1Q8VEE4 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
Rpa1Q8VEE4 Mir880-201ENSMUST00000104809 78 ntBASIC2.72□□□□□ -1.97
Rpa1Q8VEE4 Gm24656-201ENSMUST00000177548 132 ntBASIC2.72□□□□□ -1.97
Rpa1Q8VEE4 Gm27979-201ENSMUST00000185126 56 ntBASIC2.72□□□□□ -1.97
Rpa1Q8VEE4 Mir6928-201ENSMUST00000185166 70 ntBASIC2.72□□□□□ -1.97
Rpa1Q8VEE4 Gm43521-201ENSMUST00000197838 255 ntBASIC2.72□□□□□ -1.97
Rpa1Q8VEE4 Gm43107-201ENSMUST00000198729 255 ntBASIC2.72□□□□□ -1.97
Rpa1Q8VEE4 Snord43-201ENSMUST00000199549 108 ntBASIC2.72□□□□□ -1.97
Rpa1Q8VEE4 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC2.72□□□□□ -1.97
Rpa1Q8VEE4 Gm26458-201ENSMUST00000082832 128 ntBASIC2.72□□□□□ -1.97
Rpa1Q8VEE4 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.97
Rpa1Q8VEE4 Gm22004-201ENSMUST00000101884 107 ntBASIC2.71□□□□□ -1.98
Rpa1Q8VEE4 Gm22545-201ENSMUST00000104350 132 ntBASIC2.71□□□□□ -1.98
Rpa1Q8VEE4 Gm22490-201ENSMUST00000157188 119 ntBASIC2.71□□□□□ -1.98
Rpa1Q8VEE4 Gm24787-201ENSMUST00000157380 123 ntBASIC2.71□□□□□ -1.98
Rpa1Q8VEE4 Gm24238-201ENSMUST00000157792 98 ntBASIC2.71□□□□□ -1.98
Rpa1Q8VEE4 Mir3471-1-201ENSMUST00000175139 131 ntBASIC2.71□□□□□ -1.98
Rpa1Q8VEE4 Mir6377-201ENSMUST00000183760 114 ntBASIC2.71□□□□□ -1.98
Rpa1Q8VEE4 Mir7047-201ENSMUST00000184595 64 ntBASIC2.71□□□□□ -1.98
Rpa1Q8VEE4 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC2.71□□□□□ -1.98
Rpa1Q8VEE4 Gm45268-201ENSMUST00000210046 370 ntBASIC2.71□□□□□ -1.98
Rpa1Q8VEE4 AC164612.2-202ENSMUST00000216314 253 ntBASIC2.71□□□□□ -1.98
Rpa1Q8VEE4 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Rpa1Q8VEE4 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
Rpa1Q8VEE4 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Rpa1Q8VEE4 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
Rpa1Q8VEE4 Olfr592-202ENSMUST00000106893 6566 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Rpa1Q8VEE4 Gm24280-201ENSMUST00000104237 134 ntBASIC2.7□□□□□ -1.98
Rpa1Q8VEE4 Gm24376-201ENSMUST00000104399 127 ntBASIC2.7□□□□□ -1.98
Rpa1Q8VEE4 n-R5s188-201ENSMUST00000122646 105 ntBASIC2.7□□□□□ -1.98
Rpa1Q8VEE4 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC2.7□□□□□ -1.98
Rpa1Q8VEE4 Gm27786-201ENSMUST00000184337 70 ntBASIC2.7□□□□□ -1.98
Rpa1Q8VEE4 Gm44555-201ENSMUST00000209008 148 ntBASIC2.7□□□□□ -1.98
Rpa1Q8VEE4 Gm45522-201ENSMUST00000210784 166 ntBASIC2.7□□□□□ -1.98
Rpa1Q8VEE4 AC126939.3-201ENSMUST00000226061 166 ntBASIC2.7□□□□□ -1.98
Rpa1Q8VEE4 Mir3094-201ENSMUST00000175121 64 ntBASIC2.69□□□□□ -1.98
Rpa1Q8VEE4 Snora3-201ENSMUST00000083082 132 ntBASIC2.69□□□□□ -1.98
Rpa1Q8VEE4 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
Rpa1Q8VEE4 AC154386.1-201ENSMUST00000222753 2871 ntBASIC2.69□□□□□ -1.98
Rpa1Q8VEE4 Gm22497-201ENSMUST00000104499 131 ntBASIC2.68□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 11.3 ms