Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Gm23991-201ENSMUST00000117033 93 ntBASIC0.26□□□□□ -2.37
Ccdc28aQ8CEI3 Gm24000-201ENSMUST00000158063 89 ntBASIC0.26□□□□□ -2.37
Ccdc28aQ8CEI3 Gm25976-201ENSMUST00000158695 130 ntBASIC0.26□□□□□ -2.37
Ccdc28aQ8CEI3 Gm16539-201ENSMUST00000160086 327 ntBASIC0.26□□□□□ -2.37
Ccdc28aQ8CEI3 Gm26073-201ENSMUST00000179906 127 ntBASIC0.26□□□□□ -2.37
Ccdc28aQ8CEI3 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC0.26□□□□□ -2.37
Ccdc28aQ8CEI3 Gm28669-201ENSMUST00000188400 100 ntBASIC0.26□□□□□ -2.37
Ccdc28aQ8CEI3 Gm28927-201ENSMUST00000191528 272 ntBASIC0.26□□□□□ -2.37
Ccdc28aQ8CEI3 Mir3535-201ENSMUST00000197651 147 ntBASIC0.26□□□□□ -2.37
Ccdc28aQ8CEI3 AC164297.5-201ENSMUST00000224365 198 ntBASIC0.26□□□□□ -2.37
Ccdc28aQ8CEI3 Gm26495-201ENSMUST00000083152 137 ntBASIC0.26□□□□□ -2.37
Ccdc28aQ8CEI3 Mir410-201ENSMUST00000083563 81 ntBASIC0.26□□□□□ -2.37
Ccdc28aQ8CEI3 Gm26111-201ENSMUST00000083969 106 ntBASIC0.26□□□□□ -2.37
Ccdc28aQ8CEI3 Gm14307-201ENSMUST00000118930 291 ntBASIC0.25□□□□□ -2.37
Ccdc28aQ8CEI3 Gm11835-201ENSMUST00000120635 663 ntBASIC0.25□□□□□ -2.37
Ccdc28aQ8CEI3 Gm14297-201ENSMUST00000129110 291 ntBASIC0.25□□□□□ -2.37
Ccdc28aQ8CEI3 Gm16362-201ENSMUST00000135189 214 ntBASIC0.25□□□□□ -2.37
Ccdc28aQ8CEI3 Gm22706-201ENSMUST00000157907 112 ntBASIC0.25□□□□□ -2.37
Ccdc28aQ8CEI3 Gm23024-201ENSMUST00000158770 292 ntBASIC0.25□□□□□ -2.37
Ccdc28aQ8CEI3 Gm27317-201ENSMUST00000183533 95 ntBASIC0.25□□□□□ -2.37
Ccdc28aQ8CEI3 Gm37763-201ENSMUST00000193445 120 ntBASIC0.25□□□□□ -2.37
Ccdc28aQ8CEI3 Gm44052-201ENSMUST00000203382 396 ntBASIC0.25□□□□□ -2.37
Ccdc28aQ8CEI3 AC159619.2-201ENSMUST00000222924 401 ntBASIC0.25□□□□□ -2.37
Ccdc28aQ8CEI3 Gm30155-201ENSMUST00000223458 339 ntBASIC0.25□□□□□ -2.37
Ccdc28aQ8CEI3 AC165092.3-201ENSMUST00000223602 282 ntBASIC0.25□□□□□ -2.37
Ccdc28aQ8CEI3 Gm23412-201ENSMUST00000083017 107 ntBASIC0.25□□□□□ -2.37
Ccdc28aQ8CEI3 Gm25138-201ENSMUST00000083248 136 ntBASIC0.25□□□□□ -2.37
Ccdc28aQ8CEI3 Gm24616-201ENSMUST00000083274 139 ntBASIC0.25□□□□□ -2.37
Ccdc28aQ8CEI3 Mir448-201ENSMUST00000083516 112 ntBASIC0.25□□□□□ -2.37
Ccdc28aQ8CEI3 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC0.25□□□□□ -2.37
Ccdc28aQ8CEI3 Mir451a-201ENSMUST00000093557 72 ntBASIC0.25□□□□□ -2.37
Ccdc28aQ8CEI3 Gm11248-201ENSMUST00000119568 201 ntBASIC0.24□□□□□ -2.37
Ccdc28aQ8CEI3 Gm14946-201ENSMUST00000119859 296 ntBASIC0.24□□□□□ -2.37
Ccdc28aQ8CEI3 Gm13577-201ENSMUST00000121365 205 ntBASIC0.24□□□□□ -2.37
Ccdc28aQ8CEI3 Gm22085-201ENSMUST00000158344 110 ntBASIC0.24□□□□□ -2.37
Ccdc28aQ8CEI3 Gm26116-201ENSMUST00000175600 77 ntBASIC0.24□□□□□ -2.37
Ccdc28aQ8CEI3 Mir6389-201ENSMUST00000183661 102 ntBASIC0.24□□□□□ -2.37
Ccdc28aQ8CEI3 Gm23404-201ENSMUST00000082543 97 ntBASIC0.24□□□□□ -2.37
Ccdc28aQ8CEI3 Mir30c-2-201ENSMUST00000083633 84 ntBASIC0.24□□□□□ -2.37
Ccdc28aQ8CEI3 Mir709-201ENSMUST00000102190 88 ntBASIC0.23□□□□□ -2.37
Ccdc28aQ8CEI3 Gm24476-201ENSMUST00000157437 131 ntBASIC0.23□□□□□ -2.37
Ccdc28aQ8CEI3 Gm22814-201ENSMUST00000157452 104 ntBASIC0.23□□□□□ -2.37
Ccdc28aQ8CEI3 Gm26285-201ENSMUST00000177923 107 ntBASIC0.23□□□□□ -2.37
Ccdc28aQ8CEI3 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC0.23□□□□□ -2.37
Ccdc28aQ8CEI3 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC0.23□□□□□ -2.37
Ccdc28aQ8CEI3 Gm37338-201ENSMUST00000191986 127 ntBASIC0.23□□□□□ -2.37
Ccdc28aQ8CEI3 Gm45471-201ENSMUST00000211270 281 ntBASIC0.23□□□□□ -2.37
Ccdc28aQ8CEI3 AC154296.2-201ENSMUST00000214696 545 ntBASIC0.23□□□□□ -2.37
Ccdc28aQ8CEI3 Gm23622-201ENSMUST00000082460 107 ntBASIC0.23□□□□□ -2.37
Ccdc28aQ8CEI3 Snord42a-201ENSMUST00000082606 65 ntBASIC0.23□□□□□ -2.37
Ccdc28aQ8CEI3 Gm24043-201ENSMUST00000083108 116 ntBASIC0.23□□□□□ -2.37
Ccdc28aQ8CEI3 Gm10730-201ENSMUST00000194097 2723 ntBASIC0.23□□□□□ -2.37
Ccdc28aQ8CEI3 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
Ccdc28aQ8CEI3 Gm25878-201ENSMUST00000104327 93 ntBASIC0.22□□□□□ -2.37
Ccdc28aQ8CEI3 Gm22673-201ENSMUST00000104415 131 ntBASIC0.22□□□□□ -2.37
Ccdc28aQ8CEI3 Gm23640-201ENSMUST00000157860 104 ntBASIC0.22□□□□□ -2.37
Ccdc28aQ8CEI3 Gm42506-201ENSMUST00000202009 150 ntBASIC0.22□□□□□ -2.37
Ccdc28aQ8CEI3 Gm44419-201ENSMUST00000203338 229 ntBASIC0.22□□□□□ -2.37
Ccdc28aQ8CEI3 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC0.22□□□□□ -2.37
Ccdc28aQ8CEI3 AC153526.1-201ENSMUST00000219750 190 ntBASIC0.22□□□□□ -2.37
Ccdc28aQ8CEI3 CT010454.1-201ENSMUST00000225975 265 ntBASIC0.22□□□□□ -2.37
Ccdc28aQ8CEI3 n-R5s94-201ENSMUST00000082573 119 ntBASIC0.22□□□□□ -2.37
Ccdc28aQ8CEI3 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.21□□□□□ -2.38
Ccdc28aQ8CEI3 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.21□□□□□ -2.38
Ccdc28aQ8CEI3 Gm25170-201ENSMUST00000104191 129 ntBASIC0.21□□□□□ -2.38
Ccdc28aQ8CEI3 Gm22021-201ENSMUST00000104353 107 ntBASIC0.21□□□□□ -2.38
Ccdc28aQ8CEI3 Gm26274-201ENSMUST00000157103 321 ntBASIC0.21□□□□□ -2.38
Ccdc28aQ8CEI3 Gm23982-201ENSMUST00000157141 106 ntBASIC0.21□□□□□ -2.38
Ccdc28aQ8CEI3 Gm26415-201ENSMUST00000157673 292 ntBASIC0.21□□□□□ -2.38
Ccdc28aQ8CEI3 Gm22983-201ENSMUST00000158308 104 ntBASIC0.21□□□□□ -2.38
Ccdc28aQ8CEI3 Gm23853-201ENSMUST00000158375 104 ntBASIC0.21□□□□□ -2.38
Ccdc28aQ8CEI3 Mir6350-201ENSMUST00000183639 105 ntBASIC0.21□□□□□ -2.38
Ccdc28aQ8CEI3 Gm27717-201ENSMUST00000183933 151 ntBASIC0.21□□□□□ -2.38
Ccdc28aQ8CEI3 Gm43563-201ENSMUST00000196761 198 ntBASIC0.21□□□□□ -2.38
Ccdc28aQ8CEI3 Gm44211-201ENSMUST00000204867 145 ntBASIC0.21□□□□□ -2.38
Ccdc28aQ8CEI3 Gm8219-201ENSMUST00000218309 242 ntBASIC0.21□□□□□ -2.38
Ccdc28aQ8CEI3 AC154747.1-201ENSMUST00000225265 239 ntBASIC0.21□□□□□ -2.38
Ccdc28aQ8CEI3 Snora20-201ENSMUST00000082703 128 ntBASIC0.21□□□□□ -2.38
Ccdc28aQ8CEI3 Gm22421-201ENSMUST00000083058 107 ntBASIC0.21□□□□□ -2.38
Ccdc28aQ8CEI3 Gm6985-201ENSMUST00000121255 271 ntBASIC0.2□□□□□ -2.38
Ccdc28aQ8CEI3 Gm24015-201ENSMUST00000157725 232 ntBASIC0.2□□□□□ -2.38
Ccdc28aQ8CEI3 Gm24963-201ENSMUST00000157916 144 ntBASIC0.2□□□□□ -2.38
Ccdc28aQ8CEI3 Mir1933-201ENSMUST00000158930 88 ntBASIC0.2□□□□□ -2.38
Ccdc28aQ8CEI3 Gm22801-201ENSMUST00000175624 84 ntBASIC0.2□□□□□ -2.38
Ccdc28aQ8CEI3 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC0.2□□□□□ -2.38
Ccdc28aQ8CEI3 Gm27668-201ENSMUST00000184188 120 ntBASIC0.2□□□□□ -2.38
Ccdc28aQ8CEI3 Gm44057-201ENSMUST00000204547 96 ntBASIC0.2□□□□□ -2.38
Ccdc28aQ8CEI3 Gm45544-201ENSMUST00000211130 88 ntBASIC0.2□□□□□ -2.38
Ccdc28aQ8CEI3 AC129085.1-201ENSMUST00000225263 165 ntBASIC0.2□□□□□ -2.38
Ccdc28aQ8CEI3 Mir10b-201ENSMUST00000083566 68 ntBASIC0.2□□□□□ -2.38
Ccdc28aQ8CEI3 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC0.19□□□□□ -2.38
Ccdc28aQ8CEI3 Gm23321-201ENSMUST00000104465 126 ntBASIC0.19□□□□□ -2.38
Ccdc28aQ8CEI3 Gm12837-201ENSMUST00000120131 373 ntBASIC0.19□□□□□ -2.38
Ccdc28aQ8CEI3 Gm25318-201ENSMUST00000122554 314 ntBASIC0.19□□□□□ -2.38
Ccdc28aQ8CEI3 Gm26090-201ENSMUST00000157897 128 ntBASIC0.19□□□□□ -2.38
Ccdc28aQ8CEI3 Scarna3a-201ENSMUST00000158911 140 ntBASIC0.19□□□□□ -2.38
Ccdc28aQ8CEI3 Gm28849-201ENSMUST00000188127 174 ntBASIC0.19□□□□□ -2.38
Ccdc28aQ8CEI3 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC0.19□□□□□ -2.38
Ccdc28aQ8CEI3 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
Ccdc28aQ8CEI3 Gm25044-201ENSMUST00000158603 104 ntBASIC0.18□□□□□ -2.38
Retrieved 100 of 76,532 protein–RNA pairs in 135.9 ms