Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC1.11□□□□□ -2.23
Nup54Q8BTS4 Gm29022-201ENSMUST00000190702 225 ntBASIC1.11□□□□□ -2.23
Nup54Q8BTS4 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC1.11□□□□□ -2.23
Nup54Q8BTS4 Gm25820-201ENSMUST00000198589 127 ntBASIC1.11□□□□□ -2.23
Nup54Q8BTS4 Gm43199-201ENSMUST00000200019 307 ntBASIC1.11□□□□□ -2.23
Nup54Q8BTS4 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
Nup54Q8BTS4 AC160550.1-201ENSMUST00000228659 181 ntBASIC1.11□□□□□ -2.23
Nup54Q8BTS4 Gm24588-201ENSMUST00000116696 83 ntBASIC1.1□□□□□ -2.23
Nup54Q8BTS4 Mir1904-201ENSMUST00000122702 80 ntBASIC1.1□□□□□ -2.23
Nup54Q8BTS4 n-R5s183-201ENSMUST00000083939 115 ntBASIC1.1□□□□□ -2.23
Nup54Q8BTS4 Gm11856-201ENSMUST00000118712 276 ntBASIC1.09□□□□□ -2.23
Nup54Q8BTS4 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC1.09□□□□□ -2.23
Nup54Q8BTS4 Gm23760-201ENSMUST00000158350 116 ntBASIC1.09□□□□□ -2.23
Nup54Q8BTS4 Gm22888-201ENSMUST00000158640 77 ntBASIC1.09□□□□□ -2.23
Nup54Q8BTS4 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC1.09□□□□□ -2.23
Nup54Q8BTS4 CT033781.2-201ENSMUST00000221113 153 ntBASIC1.09□□□□□ -2.23
Nup54Q8BTS4 Gm22358-201ENSMUST00000082877 122 ntBASIC1.09□□□□□ -2.23
Nup54Q8BTS4 Gm23378-201ENSMUST00000082942 107 ntBASIC1.09□□□□□ -2.23
Nup54Q8BTS4 Gm25188-201ENSMUST00000083913 122 ntBASIC1.09□□□□□ -2.23
Nup54Q8BTS4 Gm24523-201ENSMUST00000083965 132 ntBASIC1.09□□□□□ -2.23
Nup54Q8BTS4 Gm11792-201ENSMUST00000120640 168 ntBASIC1.08□□□□□ -2.24
Nup54Q8BTS4 Gm23106-201ENSMUST00000157554 101 ntBASIC1.08□□□□□ -2.24
Nup54Q8BTS4 Gm22101-201ENSMUST00000157928 103 ntBASIC1.08□□□□□ -2.24
Nup54Q8BTS4 Gm24006-201ENSMUST00000158462 132 ntBASIC1.08□□□□□ -2.24
Nup54Q8BTS4 Gm25768-201ENSMUST00000158570 98 ntBASIC1.08□□□□□ -2.24
Nup54Q8BTS4 Gm22074-201ENSMUST00000158595 113 ntBASIC1.08□□□□□ -2.24
Nup54Q8BTS4 Gm26363-201ENSMUST00000158866 83 ntBASIC1.08□□□□□ -2.24
Nup54Q8BTS4 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.08□□□□□ -2.24
Nup54Q8BTS4 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
Nup54Q8BTS4 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC1.08□□□□□ -2.24
Nup54Q8BTS4 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
Nup54Q8BTS4 Gm25538-201ENSMUST00000101943 107 ntBASIC1.07□□□□□ -2.24
Nup54Q8BTS4 Gm23329-201ENSMUST00000157415 108 ntBASIC1.07□□□□□ -2.24
Nup54Q8BTS4 Gm25424-201ENSMUST00000157612 58 ntBASIC1.07□□□□□ -2.24
Nup54Q8BTS4 Gm26482-201ENSMUST00000158015 62 ntBASIC1.07□□□□□ -2.24
Nup54Q8BTS4 Gm24942-201ENSMUST00000158328 114 ntBASIC1.07□□□□□ -2.24
Nup54Q8BTS4 Gm26213-201ENSMUST00000158582 110 ntBASIC1.07□□□□□ -2.24
Nup54Q8BTS4 Mir6336-201ENSMUST00000183581 130 ntBASIC1.07□□□□□ -2.24
Nup54Q8BTS4 Mir7059-201ENSMUST00000184825 59 ntBASIC1.07□□□□□ -2.24
Nup54Q8BTS4 Gm25142-201ENSMUST00000082698 107 ntBASIC1.07□□□□□ -2.24
Nup54Q8BTS4 Gm22287-201ENSMUST00000083197 107 ntBASIC1.07□□□□□ -2.24
Nup54Q8BTS4 Mir22-201ENSMUST00000083595 95 ntBASIC1.07□□□□□ -2.24
Nup54Q8BTS4 Gm26082-201ENSMUST00000104070 127 ntBASIC1.06□□□□□ -2.24
Nup54Q8BTS4 Gm11204-201ENSMUST00000122438 147 ntBASIC1.06□□□□□ -2.24
Nup54Q8BTS4 Gm24777-201ENSMUST00000157644 107 ntBASIC1.06□□□□□ -2.24
Nup54Q8BTS4 Gm25663-201ENSMUST00000157698 135 ntBASIC1.06□□□□□ -2.24
Nup54Q8BTS4 Gm24225-201ENSMUST00000158825 98 ntBASIC1.06□□□□□ -2.24
Nup54Q8BTS4 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC1.06□□□□□ -2.24
Nup54Q8BTS4 Gm20118-201ENSMUST00000187207 162 ntBASIC1.06□□□□□ -2.24
Nup54Q8BTS4 Gm38183-201ENSMUST00000193189 205 ntBASIC1.06□□□□□ -2.24
Nup54Q8BTS4 Gm26379-202ENSMUST00000200225 132 ntBASIC1.06□□□□□ -2.24
Nup54Q8BTS4 Gm44057-201ENSMUST00000204547 96 ntBASIC1.06□□□□□ -2.24
Nup54Q8BTS4 Olfr1483-ps1-201ENSMUST00000208241 334 ntBASIC1.06□□□□□ -2.24
Nup54Q8BTS4 Gm23299-201ENSMUST00000082708 79 ntBASIC1.06□□□□□ -2.24
Nup54Q8BTS4 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.06□□□□□ -2.24
Nup54Q8BTS4 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
Nup54Q8BTS4 Mir880-201ENSMUST00000104809 78 ntBASIC1.05□□□□□ -2.24
Nup54Q8BTS4 Mir8119-201ENSMUST00000183371 129 ntBASIC1.05□□□□□ -2.24
Nup54Q8BTS4 Gm44052-201ENSMUST00000203382 396 ntBASIC1.05□□□□□ -2.24
Nup54Q8BTS4 CT009696.1-201ENSMUST00000215745 256 ntBASIC1.05□□□□□ -2.24
Nup54Q8BTS4 Gm22704-201ENSMUST00000083027 137 ntBASIC1.05□□□□□ -2.24
Nup54Q8BTS4 Mir196b-201ENSMUST00000083509 85 ntBASIC1.05□□□□□ -2.24
Nup54Q8BTS4 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC1.05□□□□□ -2.24
Nup54Q8BTS4 Gm26074-201ENSMUST00000104063 129 ntBASIC1.04□□□□□ -2.24
Nup54Q8BTS4 Gm14001-201ENSMUST00000118847 247 ntBASIC1.04□□□□□ -2.24
Nup54Q8BTS4 Gm24808-201ENSMUST00000157993 118 ntBASIC1.04□□□□□ -2.24
Nup54Q8BTS4 Gm25643-201ENSMUST00000158874 103 ntBASIC1.04□□□□□ -2.24
Nup54Q8BTS4 Mir344d-3-201ENSMUST00000175458 80 ntBASIC1.04□□□□□ -2.24
Nup54Q8BTS4 Gm23003-201ENSMUST00000179948 107 ntBASIC1.04□□□□□ -2.24
Nup54Q8BTS4 Gm45508-201ENSMUST00000209298 299 ntBASIC1.04□□□□□ -2.24
Nup54Q8BTS4 Gm13797-201ENSMUST00000121792 120 ntBASIC1.03□□□□□ -2.24
Nup54Q8BTS4 Gm23328-201ENSMUST00000157418 132 ntBASIC1.03□□□□□ -2.24
Nup54Q8BTS4 Mir6240-201ENSMUST00000184281 117 ntBASIC1.03□□□□□ -2.24
Nup54Q8BTS4 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC1.03□□□□□ -2.24
Nup54Q8BTS4 Gm25634-201ENSMUST00000082667 105 ntBASIC1.03□□□□□ -2.24
Nup54Q8BTS4 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
Nup54Q8BTS4 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC1.02□□□□□ -2.25
Nup54Q8BTS4 Gm23466-201ENSMUST00000157133 106 ntBASIC1.02□□□□□ -2.25
Nup54Q8BTS4 Gm25715-201ENSMUST00000158627 125 ntBASIC1.02□□□□□ -2.25
Nup54Q8BTS4 Mir3968-201ENSMUST00000175355 100 ntBASIC1.02□□□□□ -2.25
Nup54Q8BTS4 Gm24020-201ENSMUST00000180156 108 ntBASIC1.02□□□□□ -2.25
Nup54Q8BTS4 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC1.02□□□□□ -2.25
Nup54Q8BTS4 Gm28669-201ENSMUST00000188400 100 ntBASIC1.02□□□□□ -2.25
Nup54Q8BTS4 Gm26224-201ENSMUST00000082506 80 ntBASIC1.02□□□□□ -2.25
Nup54Q8BTS4 Gm25855-201ENSMUST00000082787 72 ntBASIC1.02□□□□□ -2.25
Nup54Q8BTS4 Gm25128-201ENSMUST00000083339 76 ntBASIC1.02□□□□□ -2.25
Nup54Q8BTS4 AC160984.1-201ENSMUST00000225855 3154 ntBASIC1.01□□□□□ -2.25
Nup54Q8BTS4 Gm22586-201ENSMUST00000157507 122 ntBASIC1.01□□□□□ -2.25
Nup54Q8BTS4 Gm20391-201ENSMUST00000174722 106 ntBASIC1.01□□□□□ -2.25
Nup54Q8BTS4 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
Nup54Q8BTS4 Gm37715-201ENSMUST00000193206 235 ntBASIC1.01□□□□□ -2.25
Nup54Q8BTS4 Gm36189-201ENSMUST00000204113 523 ntBASIC1.01□□□□□ -2.25
Nup54Q8BTS4 CT025630.1-201ENSMUST00000227901 172 ntBASIC1.01□□□□□ -2.25
Nup54Q8BTS4 Gm25650-201ENSMUST00000083784 162 ntBASIC1.01□□□□□ -2.25
Nup54Q8BTS4 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
Nup54Q8BTS4 Gm24594-201ENSMUST00000122502 99 ntBASIC1□□□□□ -2.25
Nup54Q8BTS4 Gm24635-201ENSMUST00000122712 128 ntBASIC1□□□□□ -2.25
Nup54Q8BTS4 Gm22425-201ENSMUST00000158532 138 ntBASIC1□□□□□ -2.25
Nup54Q8BTS4 Gm22802-201ENSMUST00000175621 89 ntBASIC1□□□□□ -2.25
Nup54Q8BTS4 Gm27420-201ENSMUST00000183823 79 ntBASIC1□□□□□ -2.25
Retrieved 100 of 76,532 protein–RNA pairs in 193.7 ms