Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 AC134860.6-201ENSMUST00000226038 285 ntBASIC1.34□□□□□ -2.19
Upk3bQ80YF6 Gm22683-201ENSMUST00000082854 137 ntBASIC1.34□□□□□ -2.19
Upk3bQ80YF6 Mir193a-201ENSMUST00000083461 66 ntBASIC1.34□□□□□ -2.19
Upk3bQ80YF6 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
Upk3bQ80YF6 Gm25992-201ENSMUST00000102437 109 ntBASIC1.33□□□□□ -2.2
Upk3bQ80YF6 Mir1298-201ENSMUST00000116681 98 ntBASIC1.33□□□□□ -2.2
Upk3bQ80YF6 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC1.33□□□□□ -2.2
Upk3bQ80YF6 Gm11598-201ENSMUST00000119257 357 ntBASIC1.33□□□□□ -2.2
Upk3bQ80YF6 n-R5s188-201ENSMUST00000122646 105 ntBASIC1.33□□□□□ -2.2
Upk3bQ80YF6 Gm23043-201ENSMUST00000157890 109 ntBASIC1.33□□□□□ -2.2
Upk3bQ80YF6 Gm22963-201ENSMUST00000157960 91 ntBASIC1.33□□□□□ -2.2
Upk3bQ80YF6 Gm22163-201ENSMUST00000158408 135 ntBASIC1.33□□□□□ -2.2
Upk3bQ80YF6 Gm24001-201ENSMUST00000158463 85 ntBASIC1.33□□□□□ -2.2
Upk3bQ80YF6 Gm23194-201ENSMUST00000158813 105 ntBASIC1.33□□□□□ -2.2
Upk3bQ80YF6 Gm24174-201ENSMUST00000158933 111 ntBASIC1.33□□□□□ -2.2
Upk3bQ80YF6 Gm16546-201ENSMUST00000159442 355 ntBASIC1.33□□□□□ -2.2
Upk3bQ80YF6 Gm23966-201ENSMUST00000179823 107 ntBASIC1.33□□□□□ -2.2
Upk3bQ80YF6 Gm43199-201ENSMUST00000200019 307 ntBASIC1.33□□□□□ -2.2
Upk3bQ80YF6 Gm19855-201ENSMUST00000210145 249 ntBASIC1.33□□□□□ -2.2
Upk3bQ80YF6 n-R5s183-201ENSMUST00000083939 115 ntBASIC1.33□□□□□ -2.2
Upk3bQ80YF6 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.33□□□□□ -2.2
Upk3bQ80YF6 Gm10730-201ENSMUST00000194097 2723 ntBASIC1.33□□□□□ -2.2
Upk3bQ80YF6 n-R5s15-201ENSMUST00000122635 111 ntBASIC1.32□□□□□ -2.2
Upk3bQ80YF6 Gm26181-201ENSMUST00000157687 106 ntBASIC1.32□□□□□ -2.2
Upk3bQ80YF6 Gm23181-201ENSMUST00000158685 110 ntBASIC1.32□□□□□ -2.2
Upk3bQ80YF6 Gm25071-201ENSMUST00000175232 70 ntBASIC1.32□□□□□ -2.2
Upk3bQ80YF6 Gm29603-201ENSMUST00000186792 334 ntBASIC1.32□□□□□ -2.2
Upk3bQ80YF6 AC134601.1-201ENSMUST00000221058 109 ntBASIC1.32□□□□□ -2.2
Upk3bQ80YF6 Gm22306-201ENSMUST00000082692 107 ntBASIC1.32□□□□□ -2.2
Upk3bQ80YF6 Gm25697-201ENSMUST00000082902 98 ntBASIC1.32□□□□□ -2.2
Upk3bQ80YF6 Mir488-201ENSMUST00000093595 109 ntBASIC1.32□□□□□ -2.2
Upk3bQ80YF6 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
Upk3bQ80YF6 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
Upk3bQ80YF6 Gm26074-201ENSMUST00000104063 129 ntBASIC1.31□□□□□ -2.2
Upk3bQ80YF6 Gm11792-201ENSMUST00000120640 168 ntBASIC1.31□□□□□ -2.2
Upk3bQ80YF6 Gm22790-201ENSMUST00000157229 129 ntBASIC1.31□□□□□ -2.2
Upk3bQ80YF6 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.31□□□□□ -2.2
Upk3bQ80YF6 Gm17364-201ENSMUST00000163881 72 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
Upk3bQ80YF6 Gm24366-201ENSMUST00000175383 86 ntBASIC1.31□□□□□ -2.2
Upk3bQ80YF6 Gm42855-201ENSMUST00000197388 253 ntBASIC1.31□□□□□ -2.2
Upk3bQ80YF6 Gm44385-201ENSMUST00000198781 81 ntBASIC1.31□□□□□ -2.2
Upk3bQ80YF6 Gm8219-201ENSMUST00000218309 242 ntBASIC1.31□□□□□ -2.2
Upk3bQ80YF6 AC154282.1-201ENSMUST00000223154 265 ntBASIC1.31□□□□□ -2.2
Upk3bQ80YF6 CT030645.1-201ENSMUST00000224020 231 ntBASIC1.31□□□□□ -2.2
Upk3bQ80YF6 AC168880.2-201ENSMUST00000224488 201 ntBASIC1.31□□□□□ -2.2
Upk3bQ80YF6 Gm24038-201ENSMUST00000082872 159 ntBASIC1.31□□□□□ -2.2
Upk3bQ80YF6 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC1.31□□□□□ -2.2
Upk3bQ80YF6 AC160984.1-201ENSMUST00000225855 3154 ntBASIC1.31□□□□□ -2.2
Upk3bQ80YF6 Gm6952-201ENSMUST00000118629 159 ntBASIC1.3□□□□□ -2.2
Upk3bQ80YF6 Gm13433-201ENSMUST00000121701 240 ntBASIC1.3□□□□□ -2.2
Upk3bQ80YF6 Gm11334-201ENSMUST00000121969 156 ntBASIC1.3□□□□□ -2.2
Upk3bQ80YF6 Gm24262-201ENSMUST00000157431 144 ntBASIC1.3□□□□□ -2.2
Upk3bQ80YF6 Gm22946-201ENSMUST00000158558 82 ntBASIC1.3□□□□□ -2.2
Upk3bQ80YF6 Gm26160-201ENSMUST00000158965 63 ntBASIC1.3□□□□□ -2.2
Upk3bQ80YF6 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC1.3□□□□□ -2.2
Upk3bQ80YF6 Gm23860-201ENSMUST00000179446 132 ntBASIC1.3□□□□□ -2.2
Upk3bQ80YF6 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.3□□□□□ -2.2
Upk3bQ80YF6 Gm22686-201ENSMUST00000082847 100 ntBASIC1.3□□□□□ -2.2
Upk3bQ80YF6 Gm25627-201ENSMUST00000084003 153 ntBASIC1.3□□□□□ -2.2
Upk3bQ80YF6 AC161250.2-201ENSMUST00000215114 3107 ntBASIC1.29□□□□□ -2.2
Upk3bQ80YF6 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
Upk3bQ80YF6 Gm26342-201ENSMUST00000104557 129 ntBASIC1.29□□□□□ -2.2
Upk3bQ80YF6 Gm13922-201ENSMUST00000119505 156 ntBASIC1.29□□□□□ -2.2
Upk3bQ80YF6 n-R5s159-201ENSMUST00000122681 120 ntBASIC1.29□□□□□ -2.2
Upk3bQ80YF6 Gm24895-201ENSMUST00000122742 74 ntBASIC1.29□□□□□ -2.2
Upk3bQ80YF6 Gm25558-201ENSMUST00000158083 106 ntBASIC1.29□□□□□ -2.2
Upk3bQ80YF6 Gm22384-201ENSMUST00000158187 104 ntBASIC1.29□□□□□ -2.2
Upk3bQ80YF6 Gm23208-201ENSMUST00000158666 127 ntBASIC1.29□□□□□ -2.2
Upk3bQ80YF6 Gm44338-201ENSMUST00000198614 110 ntBASIC1.29□□□□□ -2.2
Upk3bQ80YF6 Hmgb1l-201ENSMUST00000082150 571 ntBASIC1.29□□□□□ -2.2
Upk3bQ80YF6 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
Upk3bQ80YF6 Gm44177-201ENSMUST00000204338 2667 ntBASIC1.28□□□□□ -2.2
Upk3bQ80YF6 Gm24276-201ENSMUST00000102181 110 ntBASIC1.28□□□□□ -2.2
Upk3bQ80YF6 Gm22373-201ENSMUST00000104584 89 ntBASIC1.28□□□□□ -2.2
Upk3bQ80YF6 Gm23898-201ENSMUST00000158111 103 ntBASIC1.28□□□□□ -2.2
Upk3bQ80YF6 Mir3086-201ENSMUST00000175072 87 ntBASIC1.28□□□□□ -2.2
Upk3bQ80YF6 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.28□□□□□ -2.2
Upk3bQ80YF6 AC154994.1-201ENSMUST00000217395 302 ntBASIC1.28□□□□□ -2.2
Upk3bQ80YF6 AC192091.2-201ENSMUST00000217869 117 ntBASIC1.28□□□□□ -2.2
Upk3bQ80YF6 AC160863.1-201ENSMUST00000218412 317 ntBASIC1.28□□□□□ -2.2
Upk3bQ80YF6 Gm18502-201ENSMUST00000218679 199 ntBASIC1.28□□□□□ -2.2
Upk3bQ80YF6 AC126691.1-201ENSMUST00000226534 202 ntBASIC1.28□□□□□ -2.2
Upk3bQ80YF6 Gm25812-201ENSMUST00000082751 103 ntBASIC1.28□□□□□ -2.2
Upk3bQ80YF6 Gm23947-201ENSMUST00000093636 107 ntBASIC1.28□□□□□ -2.2
Upk3bQ80YF6 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC1.28□□□□□ -2.2
Upk3bQ80YF6 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.21
Upk3bQ80YF6 Mir1193-201ENSMUST00000116761 121 ntBASIC1.27□□□□□ -2.21
Upk3bQ80YF6 n-R5s73-201ENSMUST00000122508 107 ntBASIC1.27□□□□□ -2.21
Upk3bQ80YF6 Gm22477-201ENSMUST00000122569 316 ntBASIC1.27□□□□□ -2.21
Upk3bQ80YF6 Gm22082-201ENSMUST00000157587 161 ntBASIC1.27□□□□□ -2.21
Upk3bQ80YF6 Gm22612-201ENSMUST00000158293 101 ntBASIC1.27□□□□□ -2.21
Upk3bQ80YF6 Gm26004-201ENSMUST00000158804 116 ntBASIC1.27□□□□□ -2.21
Upk3bQ80YF6 Trav5d-3-201ENSMUST00000170041 270 ntBASIC1.27□□□□□ -2.21
Upk3bQ80YF6 Gm25642-201ENSMUST00000175137 66 ntBASIC1.27□□□□□ -2.21
Upk3bQ80YF6 Gm16404-201ENSMUST00000177739 468 ntBASIC1.27□□□□□ -2.21
Upk3bQ80YF6 Gm14598-201ENSMUST00000180109 468 ntBASIC1.27□□□□□ -2.21
Upk3bQ80YF6 Gm14625-201ENSMUST00000180231 468 ntBASIC1.27□□□□□ -2.21
Upk3bQ80YF6 Mir7679-201ENSMUST00000183379 63 ntBASIC1.27□□□□□ -2.21
Upk3bQ80YF6 Gm42719-201ENSMUST00000197393 355 ntBASIC1.27□□□□□ -2.21
Upk3bQ80YF6 Gm44464-201ENSMUST00000198010 138 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 138.7 ms