Protein–RNA interactions for Protein: Q6NVF9

Cpsf6, Cleavage and polyadenylation specificity factor subunit 6, mousemouse

Known RBP Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6Q6NVF9 Mir878-201ENSMUST00000104680 78 ntBASIC2.62□□□□□ -1.99
Cpsf6Q6NVF9 DQ267100-201ENSMUST00000122600 72 ntBASIC2.62□□□□□ -1.99
Cpsf6Q6NVF9 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC2.62□□□□□ -1.99
Cpsf6Q6NVF9 Gm22963-201ENSMUST00000157960 91 ntBASIC2.62□□□□□ -1.99
Cpsf6Q6NVF9 Gm23223-201ENSMUST00000158119 127 ntBASIC2.62□□□□□ -1.99
Cpsf6Q6NVF9 Gm25769-201ENSMUST00000158569 127 ntBASIC2.62□□□□□ -1.99
Cpsf6Q6NVF9 Gm24524-201ENSMUST00000082925 170 ntBASIC2.62□□□□□ -1.99
Cpsf6Q6NVF9 Gm23246-201ENSMUST00000083371 67 ntBASIC2.62□□□□□ -1.99
Cpsf6Q6NVF9 Gm25627-201ENSMUST00000084003 153 ntBASIC2.62□□□□□ -1.99
Cpsf6Q6NVF9 Snora33-201ENSMUST00000093556 129 ntBASIC2.62□□□□□ -1.99
Cpsf6Q6NVF9 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
Cpsf6Q6NVF9 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
Cpsf6Q6NVF9 Gm25610-201ENSMUST00000104016 129 ntBASIC2.61□□□□□ -1.99
Cpsf6Q6NVF9 Gm26099-201ENSMUST00000157248 109 ntBASIC2.61□□□□□ -1.99
Cpsf6Q6NVF9 Gm24082-201ENSMUST00000175175 83 ntBASIC2.61□□□□□ -1.99
Cpsf6Q6NVF9 Mir7578-201ENSMUST00000183455 82 ntBASIC2.61□□□□□ -1.99
Cpsf6Q6NVF9 Mir7242-201ENSMUST00000183710 79 ntBASIC2.61□□□□□ -1.99
Cpsf6Q6NVF9 Gm29658-201ENSMUST00000185404 230 ntBASIC2.61□□□□□ -1.99
Cpsf6Q6NVF9 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Cpsf6Q6NVF9 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC2.61□□□□□ -1.99
Cpsf6Q6NVF9 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Cpsf6Q6NVF9 AC157570.1-201ENSMUST00000218052 3778 ntBASIC2.6□□□□□ -1.99
Cpsf6Q6NVF9 Mir293-201ENSMUST00000104841 80 ntBASIC2.6□□□□□ -1.99
Cpsf6Q6NVF9 n-R5s189-201ENSMUST00000122675 114 ntBASIC2.6□□□□□ -1.99
Cpsf6Q6NVF9 Gm23983-201ENSMUST00000157142 114 ntBASIC2.6□□□□□ -1.99
Cpsf6Q6NVF9 Gm25280-201ENSMUST00000157269 101 ntBASIC2.6□□□□□ -1.99
Cpsf6Q6NVF9 Gm26088-201ENSMUST00000157896 131 ntBASIC2.6□□□□□ -1.99
Cpsf6Q6NVF9 Gm37081-201ENSMUST00000192034 196 ntBASIC2.6□□□□□ -1.99
Cpsf6Q6NVF9 Gm44600-201ENSMUST00000208540 111 ntBASIC2.6□□□□□ -1.99
Cpsf6Q6NVF9 Mir128-1-201ENSMUST00000083586 70 ntBASIC2.6□□□□□ -1.99
Cpsf6Q6NVF9 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Cpsf6Q6NVF9 Gm11792-201ENSMUST00000120640 168 ntBASIC2.59□□□□□ -1.99
Cpsf6Q6NVF9 n-R5s73-201ENSMUST00000122508 107 ntBASIC2.59□□□□□ -1.99
Cpsf6Q6NVF9 Gm22067-201ENSMUST00000122790 107 ntBASIC2.59□□□□□ -1.99
Cpsf6Q6NVF9 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC2.59□□□□□ -1.99
Cpsf6Q6NVF9 Gm22279-201ENSMUST00000157200 93 ntBASIC2.59□□□□□ -1.99
Cpsf6Q6NVF9 Gm23349-201ENSMUST00000158432 98 ntBASIC2.59□□□□□ -1.99
Cpsf6Q6NVF9 Gm44491-201ENSMUST00000196794 96 ntBASIC2.59□□□□□ -1.99
Cpsf6Q6NVF9 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -2
Cpsf6Q6NVF9 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC2.59□□□□□ -2
Cpsf6Q6NVF9 Olfr810-203ENSMUST00000214878 4709 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
Cpsf6Q6NVF9 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.58□□□□□ -2
Cpsf6Q6NVF9 Gm13136-201ENSMUST00000121031 2950 ntBASIC2.58□□□□□ -2
Cpsf6Q6NVF9 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
Cpsf6Q6NVF9 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Cpsf6Q6NVF9 Gm14937-201ENSMUST00000119709 208 ntBASIC2.58□□□□□ -2
Cpsf6Q6NVF9 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC2.58□□□□□ -2
Cpsf6Q6NVF9 Gm25488-201ENSMUST00000158728 118 ntBASIC2.58□□□□□ -2
Cpsf6Q6NVF9 Gm25490-201ENSMUST00000158734 130 ntBASIC2.58□□□□□ -2
Cpsf6Q6NVF9 Mir6377-201ENSMUST00000183760 114 ntBASIC2.58□□□□□ -2
Cpsf6Q6NVF9 Gm19257-201ENSMUST00000186121 183 ntBASIC2.58□□□□□ -2
Cpsf6Q6NVF9 Gm43521-201ENSMUST00000197838 255 ntBASIC2.58□□□□□ -2
Cpsf6Q6NVF9 Gm43107-201ENSMUST00000198729 255 ntBASIC2.58□□□□□ -2
Cpsf6Q6NVF9 Gm42960-201ENSMUST00000202160 241 ntBASIC2.58□□□□□ -2
Cpsf6Q6NVF9 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC2.58□□□□□ -2
Cpsf6Q6NVF9 Gm25697-201ENSMUST00000082902 98 ntBASIC2.58□□□□□ -2
Cpsf6Q6NVF9 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC2.58□□□□□ -2
Cpsf6Q6NVF9 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.57□□□□□ -2
Cpsf6Q6NVF9 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC2.57□□□□□ -2
Cpsf6Q6NVF9 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC2.57□□□□□ -2
Cpsf6Q6NVF9 Gm22387-201ENSMUST00000158191 131 ntBASIC2.57□□□□□ -2
Cpsf6Q6NVF9 Gm25976-201ENSMUST00000158695 130 ntBASIC2.57□□□□□ -2
Cpsf6Q6NVF9 Gm18346-201ENSMUST00000216782 325 ntBASIC2.57□□□□□ -2
Cpsf6Q6NVF9 AC122327.1-201ENSMUST00000220778 108 ntBASIC2.57□□□□□ -2
Cpsf6Q6NVF9 Gm24203-201ENSMUST00000082949 114 ntBASIC2.57□□□□□ -2
Cpsf6Q6NVF9 Gm45178-201ENSMUST00000207744 4110 ntBASIC2.56□□□□□ -2
Cpsf6Q6NVF9 Gm25526-201ENSMUST00000104332 132 ntBASIC2.56□□□□□ -2
Cpsf6Q6NVF9 Gm22497-201ENSMUST00000104499 131 ntBASIC2.56□□□□□ -2
Cpsf6Q6NVF9 Gm25539-201ENSMUST00000116886 122 ntBASIC2.56□□□□□ -2
Cpsf6Q6NVF9 Gm9009-201ENSMUST00000117321 326 ntBASIC2.56□□□□□ -2
Cpsf6Q6NVF9 Gm24649-201ENSMUST00000157106 134 ntBASIC2.56□□□□□ -2
Cpsf6Q6NVF9 Gm23261-201ENSMUST00000158316 136 ntBASIC2.56□□□□□ -2
Cpsf6Q6NVF9 Gm24816-201ENSMUST00000175311 151 ntBASIC2.56□□□□□ -2
Cpsf6Q6NVF9 Gm23268-201ENSMUST00000175494 78 ntBASIC2.56□□□□□ -2
Cpsf6Q6NVF9 Gm42807-201ENSMUST00000200141 329 ntBASIC2.56□□□□□ -2
Cpsf6Q6NVF9 Gm43977-201ENSMUST00000203970 189 ntBASIC2.56□□□□□ -2
Cpsf6Q6NVF9 Gm30534-201ENSMUST00000217928 207 ntBASIC2.56□□□□□ -2
Cpsf6Q6NVF9 AC168056.1-201ENSMUST00000225270 180 ntBASIC2.56□□□□□ -2
Cpsf6Q6NVF9 Snora41-201ENSMUST00000082668 132 ntBASIC2.56□□□□□ -2
Cpsf6Q6NVF9 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC2.55□□□□□ -2
Cpsf6Q6NVF9 Gm23986-201ENSMUST00000157144 63 ntBASIC2.55□□□□□ -2
Cpsf6Q6NVF9 Gm22540-201ENSMUST00000158168 117 ntBASIC2.55□□□□□ -2
Cpsf6Q6NVF9 Gm23190-201ENSMUST00000180307 64 ntBASIC2.55□□□□□ -2
Cpsf6Q6NVF9 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC2.55□□□□□ -2
Cpsf6Q6NVF9 Gm42770-201ENSMUST00000199657 4155 ntBASIC2.55□□□□□ -2
Cpsf6Q6NVF9 Gm44240-201ENSMUST00000204015 2654 ntBASIC2.55□□□□□ -2
Cpsf6Q6NVF9 Gm38162-201ENSMUST00000195562 4597 ntBASIC2.54□□□□□ -2
Cpsf6Q6NVF9 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
Cpsf6Q6NVF9 Gm23351-201ENSMUST00000158427 125 ntBASIC2.54□□□□□ -2
Cpsf6Q6NVF9 Gm27379-201ENSMUST00000183730 123 ntBASIC2.54□□□□□ -2
Cpsf6Q6NVF9 Igkv11-118-201ENSMUST00000199448 346 ntBASIC2.54□□□□□ -2
Cpsf6Q6NVF9 Gm34314-201ENSMUST00000203622 367 ntBASIC2.54□□□□□ -2
Cpsf6Q6NVF9 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC2.54□□□□□ -2
Cpsf6Q6NVF9 AC166341.8-201ENSMUST00000221267 108 ntBASIC2.54□□□□□ -2
Cpsf6Q6NVF9 AC129202.2-201ENSMUST00000225123 177 ntBASIC2.54□□□□□ -2
Cpsf6Q6NVF9 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.54□□□□□ -2
Cpsf6Q6NVF9 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.54□□□□□ -2
Cpsf6Q6NVF9 Gm23128-201ENSMUST00000104257 132 ntBASIC2.53□□□□□ -2
Cpsf6Q6NVF9 Gm24291-201ENSMUST00000157633 162 ntBASIC2.53□□□□□ -2
Cpsf6Q6NVF9 Gm26411-201ENSMUST00000157668 107 ntBASIC2.53□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 172.6 ms