Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Gm26415-201ENSMUST00000157673 292 ntBASIC2.8□□□□□ -1.96
Sh3rf1Q69ZI1 Gm22651-201ENSMUST00000157872 94 ntBASIC2.8□□□□□ -1.96
Sh3rf1Q69ZI1 Snord53-201ENSMUST00000175146 78 ntBASIC2.8□□□□□ -1.96
Sh3rf1Q69ZI1 AC168266.1-201ENSMUST00000216024 226 ntBASIC2.8□□□□□ -1.96
Sh3rf1Q69ZI1 AC124687.1-201ENSMUST00000221868 189 ntBASIC2.8□□□□□ -1.96
Sh3rf1Q69ZI1 n-R5s40-201ENSMUST00000082475 124 ntBASIC2.8□□□□□ -1.96
Sh3rf1Q69ZI1 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Sh3rf1Q69ZI1 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Sh3rf1Q69ZI1 Gm25945-201ENSMUST00000122484 135 ntBASIC2.79□□□□□ -1.96
Sh3rf1Q69ZI1 Gm23788-201ENSMUST00000122535 106 ntBASIC2.79□□□□□ -1.96
Sh3rf1Q69ZI1 Gm25270-201ENSMUST00000122606 138 ntBASIC2.79□□□□□ -1.96
Sh3rf1Q69ZI1 Mir6386-201ENSMUST00000183558 104 ntBASIC2.79□□□□□ -1.96
Sh3rf1Q69ZI1 Gm23790-201ENSMUST00000083013 107 ntBASIC2.79□□□□□ -1.96
Sh3rf1Q69ZI1 Gm42445-201ENSMUST00000196996 2893 ntBASIC2.79□□□□□ -1.96
Sh3rf1Q69ZI1 Gm38706-201ENSMUST00000182397 2617 ntBASIC2.78□□□□□ -1.96
Sh3rf1Q69ZI1 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
Sh3rf1Q69ZI1 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
Sh3rf1Q69ZI1 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Sh3rf1Q69ZI1 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Sh3rf1Q69ZI1 Gm24126-201ENSMUST00000104111 106 ntBASIC2.78□□□□□ -1.96
Sh3rf1Q69ZI1 Gm23268-201ENSMUST00000175494 78 ntBASIC2.78□□□□□ -1.96
Sh3rf1Q69ZI1 Gm22129-201ENSMUST00000179034 107 ntBASIC2.78□□□□□ -1.96
Sh3rf1Q69ZI1 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC2.78□□□□□ -1.96
Sh3rf1Q69ZI1 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC2.78□□□□□ -1.96
Sh3rf1Q69ZI1 Gm26326-201ENSMUST00000083070 129 ntBASIC2.78□□□□□ -1.96
Sh3rf1Q69ZI1 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Sh3rf1Q69ZI1 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Sh3rf1Q69ZI1 Gm23911-201ENSMUST00000104596 134 ntBASIC2.77□□□□□ -1.97
Sh3rf1Q69ZI1 Gm26406-201ENSMUST00000158503 124 ntBASIC2.77□□□□□ -1.97
Sh3rf1Q69ZI1 Gm22416-201ENSMUST00000158590 88 ntBASIC2.77□□□□□ -1.97
Sh3rf1Q69ZI1 Gm25119-201ENSMUST00000158815 88 ntBASIC2.77□□□□□ -1.97
Sh3rf1Q69ZI1 Gm28669-201ENSMUST00000188400 100 ntBASIC2.77□□□□□ -1.97
Sh3rf1Q69ZI1 Gm45288-201ENSMUST00000210236 151 ntBASIC2.77□□□□□ -1.97
Sh3rf1Q69ZI1 AC174457.1-201ENSMUST00000215932 226 ntBASIC2.77□□□□□ -1.97
Sh3rf1Q69ZI1 Gm25124-201ENSMUST00000083345 164 ntBASIC2.77□□□□□ -1.97
Sh3rf1Q69ZI1 Gm42770-201ENSMUST00000199657 4155 ntBASIC2.77□□□□□ -1.97
Sh3rf1Q69ZI1 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Sh3rf1Q69ZI1 Gm22750-201ENSMUST00000102076 103 ntBASIC2.76□□□□□ -1.97
Sh3rf1Q69ZI1 Snord78-201ENSMUST00000104032 66 ntBASIC2.76□□□□□ -1.97
Sh3rf1Q69ZI1 Gm22772-201ENSMUST00000104451 121 ntBASIC2.76□□□□□ -1.97
Sh3rf1Q69ZI1 Gm26341-201ENSMUST00000104561 134 ntBASIC2.76□□□□□ -1.97
Sh3rf1Q69ZI1 Gm24632-201ENSMUST00000122770 323 ntBASIC2.76□□□□□ -1.97
Sh3rf1Q69ZI1 Gm22330-201ENSMUST00000158068 115 ntBASIC2.76□□□□□ -1.97
Sh3rf1Q69ZI1 Gm25769-201ENSMUST00000158569 127 ntBASIC2.76□□□□□ -1.97
Sh3rf1Q69ZI1 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC2.76□□□□□ -1.97
Sh3rf1Q69ZI1 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Sh3rf1Q69ZI1 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Sh3rf1Q69ZI1 Gm37928-201ENSMUST00000193265 4131 ntBASIC2.76□□□□□ -1.97
Sh3rf1Q69ZI1 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Sh3rf1Q69ZI1 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Sh3rf1Q69ZI1 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
Sh3rf1Q69ZI1 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC2.75□□□□□ -1.97
Sh3rf1Q69ZI1 Gm25558-201ENSMUST00000158083 106 ntBASIC2.75□□□□□ -1.97
Sh3rf1Q69ZI1 Gm27446-201ENSMUST00000183963 89 ntBASIC2.75□□□□□ -1.97
Sh3rf1Q69ZI1 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Sh3rf1Q69ZI1 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
Sh3rf1Q69ZI1 Gm26473-201ENSMUST00000116763 127 ntBASIC2.74□□□□□ -1.97
Sh3rf1Q69ZI1 Gm14843-201ENSMUST00000119596 212 ntBASIC2.74□□□□□ -1.97
Sh3rf1Q69ZI1 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.74□□□□□ -1.97
Sh3rf1Q69ZI1 Gm24681-201ENSMUST00000158760 107 ntBASIC2.74□□□□□ -1.97
Sh3rf1Q69ZI1 Gm35736-201ENSMUST00000203681 313 ntBASIC2.74□□□□□ -1.97
Sh3rf1Q69ZI1 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC2.74□□□□□ -1.97
Sh3rf1Q69ZI1 AC098718.1-201ENSMUST00000226166 175 ntBASIC2.74□□□□□ -1.97
Sh3rf1Q69ZI1 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Sh3rf1Q69ZI1 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
Sh3rf1Q69ZI1 Olfr592-202ENSMUST00000106893 6566 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Sh3rf1Q69ZI1 Gm24122-201ENSMUST00000104107 132 ntBASIC2.73□□□□□ -1.97
Sh3rf1Q69ZI1 Gm22674-201ENSMUST00000104413 131 ntBASIC2.73□□□□□ -1.97
Sh3rf1Q69ZI1 Gm15272-201ENSMUST00000120865 233 ntBASIC2.73□□□□□ -1.97
Sh3rf1Q69ZI1 Gm24443-201ENSMUST00000157242 132 ntBASIC2.73□□□□□ -1.97
Sh3rf1Q69ZI1 Gm25280-201ENSMUST00000157269 101 ntBASIC2.73□□□□□ -1.97
Sh3rf1Q69ZI1 Gm23588-201ENSMUST00000157659 99 ntBASIC2.73□□□□□ -1.97
Sh3rf1Q69ZI1 Gm24947-201ENSMUST00000158334 110 ntBASIC2.73□□□□□ -1.97
Sh3rf1Q69ZI1 Gm5224-201ENSMUST00000183060 350 ntBASIC2.73□□□□□ -1.97
Sh3rf1Q69ZI1 Gm9156-201ENSMUST00000189660 463 ntBASIC2.73□□□□□ -1.97
Sh3rf1Q69ZI1 Gm34314-201ENSMUST00000203622 367 ntBASIC2.73□□□□□ -1.97
Sh3rf1Q69ZI1 Gm44526-201ENSMUST00000204664 121 ntBASIC2.73□□□□□ -1.97
Sh3rf1Q69ZI1 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC2.73□□□□□ -1.97
Sh3rf1Q69ZI1 Gm45452-201ENSMUST00000210905 177 ntBASIC2.73□□□□□ -1.97
Sh3rf1Q69ZI1 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Sh3rf1Q69ZI1 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Sh3rf1Q69ZI1 Hmgb1l-201ENSMUST00000082150 571 ntBASIC2.73□□□□□ -1.97
Sh3rf1Q69ZI1 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
Sh3rf1Q69ZI1 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Sh3rf1Q69ZI1 Mir542-201ENSMUST00000102186 85 ntBASIC2.72□□□□□ -1.97
Sh3rf1Q69ZI1 Gm24280-201ENSMUST00000104237 134 ntBASIC2.72□□□□□ -1.97
Sh3rf1Q69ZI1 Gm14671-201ENSMUST00000121790 262 ntBASIC2.72□□□□□ -1.97
Sh3rf1Q69ZI1 Gm25112-201ENSMUST00000122680 104 ntBASIC2.72□□□□□ -1.97
Sh3rf1Q69ZI1 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
Sh3rf1Q69ZI1 Gm25887-201ENSMUST00000157777 84 ntBASIC2.72□□□□□ -1.97
Sh3rf1Q69ZI1 Gm24436-201ENSMUST00000157889 302 ntBASIC2.72□□□□□ -1.97
Sh3rf1Q69ZI1 Gm22540-201ENSMUST00000158168 117 ntBASIC2.72□□□□□ -1.97
Sh3rf1Q69ZI1 Gm22770-201ENSMUST00000158368 67 ntBASIC2.72□□□□□ -1.97
Sh3rf1Q69ZI1 Mir6928-201ENSMUST00000185166 70 ntBASIC2.72□□□□□ -1.97
Sh3rf1Q69ZI1 Gm44903-201ENSMUST00000206840 130 ntBASIC2.72□□□□□ -1.97
Sh3rf1Q69ZI1 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Sh3rf1Q69ZI1 Gm26247-201ENSMUST00000116702 91 ntBASIC2.71□□□□□ -1.98
Sh3rf1Q69ZI1 Gm14923-201ENSMUST00000118270 155 ntBASIC2.71□□□□□ -1.98
Sh3rf1Q69ZI1 Gm22319-201ENSMUST00000157147 122 ntBASIC2.71□□□□□ -1.98
Sh3rf1Q69ZI1 Gm24082-201ENSMUST00000175175 83 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 148 ms