Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 Gm44177-201ENSMUST00000204338 2667 ntBASIC3.44□□□□□ -1.86
Scaf1Q5U4C3 Gm13588-201ENSMUST00000120026 135 ntBASIC3.44□□□□□ -1.86
Scaf1Q5U4C3 Gm25707-201ENSMUST00000175120 96 ntBASIC3.44□□□□□ -1.86
Scaf1Q5U4C3 Gm24926-201ENSMUST00000178053 79 ntBASIC3.44□□□□□ -1.86
Scaf1Q5U4C3 Gm22632-201ENSMUST00000178266 79 ntBASIC3.44□□□□□ -1.86
Scaf1Q5U4C3 AC129202.1-201ENSMUST00000224895 526 ntBASIC3.44□□□□□ -1.86
Scaf1Q5U4C3 Gm26494-201ENSMUST00000083154 143 ntBASIC3.44□□□□□ -1.86
Scaf1Q5U4C3 Gm24493-201ENSMUST00000083805 143 ntBASIC3.44□□□□□ -1.86
Scaf1Q5U4C3 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Scaf1Q5U4C3 Gm24482-201ENSMUST00000117005 93 ntBASIC3.43□□□□□ -1.86
Scaf1Q5U4C3 Gm14588-201ENSMUST00000119895 172 ntBASIC3.43□□□□□ -1.86
Scaf1Q5U4C3 Trav5d-3-201ENSMUST00000170041 270 ntBASIC3.43□□□□□ -1.86
Scaf1Q5U4C3 Gm38298-201ENSMUST00000193578 118 ntBASIC3.43□□□□□ -1.86
Scaf1Q5U4C3 AC120540.2-201ENSMUST00000221716 387 ntBASIC3.43□□□□□ -1.86
Scaf1Q5U4C3 Gm23303-201ENSMUST00000082714 152 ntBASIC3.43□□□□□ -1.86
Scaf1Q5U4C3 Gm23445-201ENSMUST00000082800 107 ntBASIC3.43□□□□□ -1.86
Scaf1Q5U4C3 Mir151-201ENSMUST00000083678 68 ntBASIC3.43□□□□□ -1.86
Scaf1Q5U4C3 Gm23847-201ENSMUST00000083829 110 ntBASIC3.43□□□□□ -1.86
Scaf1Q5U4C3 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Scaf1Q5U4C3 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Scaf1Q5U4C3 Gm15067-201ENSMUST00000119534 156 ntBASIC3.42□□□□□ -1.86
Scaf1Q5U4C3 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC3.42□□□□□ -1.86
Scaf1Q5U4C3 Gm26411-201ENSMUST00000157668 107 ntBASIC3.42□□□□□ -1.86
Scaf1Q5U4C3 Gm22554-201ENSMUST00000157798 147 ntBASIC3.42□□□□□ -1.86
Scaf1Q5U4C3 Gm23033-201ENSMUST00000157996 134 ntBASIC3.42□□□□□ -1.86
Scaf1Q5U4C3 Gm25771-201ENSMUST00000158565 144 ntBASIC3.42□□□□□ -1.86
Scaf1Q5U4C3 Gm25769-201ENSMUST00000158569 127 ntBASIC3.42□□□□□ -1.86
Scaf1Q5U4C3 Mir93-201ENSMUST00000083593 88 ntBASIC3.42□□□□□ -1.86
Scaf1Q5U4C3 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Scaf1Q5U4C3 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC3.42□□□□□ -1.86
Scaf1Q5U4C3 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
Scaf1Q5U4C3 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Scaf1Q5U4C3 Mir92-1-201ENSMUST00000102108 80 ntBASIC3.41□□□□□ -1.86
Scaf1Q5U4C3 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC3.41□□□□□ -1.86
Scaf1Q5U4C3 Gm22790-201ENSMUST00000157229 129 ntBASIC3.41□□□□□ -1.86
Scaf1Q5U4C3 Mir6925-201ENSMUST00000197857 70 ntBASIC3.41□□□□□ -1.86
Scaf1Q5U4C3 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Scaf1Q5U4C3 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
Scaf1Q5U4C3 Gm22664-201ENSMUST00000158719 105 ntBASIC3.4□□□□□ -1.87
Scaf1Q5U4C3 Gm27668-201ENSMUST00000184188 120 ntBASIC3.4□□□□□ -1.87
Scaf1Q5U4C3 Mir378a-201ENSMUST00000198300 66 ntBASIC3.4□□□□□ -1.87
Scaf1Q5U4C3 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Scaf1Q5U4C3 AC124739.2-201ENSMUST00000222201 109 ntBASIC3.4□□□□□ -1.87
Scaf1Q5U4C3 Gm25402-201ENSMUST00000082966 131 ntBASIC3.4□□□□□ -1.87
Scaf1Q5U4C3 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
Scaf1Q5U4C3 Gm23859-201ENSMUST00000158383 64 ntBASIC3.39□□□□□ -1.87
Scaf1Q5U4C3 Snord53-201ENSMUST00000175146 78 ntBASIC3.39□□□□□ -1.87
Scaf1Q5U4C3 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC3.39□□□□□ -1.87
Scaf1Q5U4C3 Gm24148-201ENSMUST00000082762 80 ntBASIC3.39□□□□□ -1.87
Scaf1Q5U4C3 Snora3-201ENSMUST00000083082 132 ntBASIC3.39□□□□□ -1.87
Scaf1Q5U4C3 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Scaf1Q5U4C3 Gm24000-201ENSMUST00000158063 89 ntBASIC3.38□□□□□ -1.87
Scaf1Q5U4C3 Gm24736-201ENSMUST00000158862 130 ntBASIC3.38□□□□□ -1.87
Scaf1Q5U4C3 Gm37796-201ENSMUST00000195327 134 ntBASIC3.38□□□□□ -1.87
Scaf1Q5U4C3 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Scaf1Q5U4C3 AC158598.1-201ENSMUST00000214349 3847 ntBASIC3.38□□□□□ -1.87
Scaf1Q5U4C3 Gm26341-201ENSMUST00000104561 134 ntBASIC3.37□□□□□ -1.87
Scaf1Q5U4C3 Mir1949-201ENSMUST00000157434 141 ntBASIC3.37□□□□□ -1.87
Scaf1Q5U4C3 Gm26415-201ENSMUST00000157673 292 ntBASIC3.37□□□□□ -1.87
Scaf1Q5U4C3 AC126691.1-201ENSMUST00000226534 202 ntBASIC3.37□□□□□ -1.87
Scaf1Q5U4C3 Gm25628-201ENSMUST00000084002 105 ntBASIC3.37□□□□□ -1.87
Scaf1Q5U4C3 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Scaf1Q5U4C3 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Scaf1Q5U4C3 Gm24075-201ENSMUST00000158175 72 ntBASIC3.36□□□□□ -1.87
Scaf1Q5U4C3 Gm23409-201ENSMUST00000158516 237 ntBASIC3.36□□□□□ -1.87
Scaf1Q5U4C3 Gm23181-201ENSMUST00000158685 110 ntBASIC3.36□□□□□ -1.87
Scaf1Q5U4C3 Gm22283-201ENSMUST00000082556 161 ntBASIC3.36□□□□□ -1.87
Scaf1Q5U4C3 Gm24698-201ENSMUST00000083883 130 ntBASIC3.36□□□□□ -1.87
Scaf1Q5U4C3 Gm25529-201ENSMUST00000104850 92 ntBASIC3.35□□□□□ -1.87
Scaf1Q5U4C3 Gm24212-201ENSMUST00000158258 132 ntBASIC3.35□□□□□ -1.87
Scaf1Q5U4C3 Mir3471-1-201ENSMUST00000175139 131 ntBASIC3.35□□□□□ -1.87
Scaf1Q5U4C3 Gm26379-202ENSMUST00000200225 132 ntBASIC3.35□□□□□ -1.87
Scaf1Q5U4C3 n-R5s197-201ENSMUST00000083302 119 ntBASIC3.35□□□□□ -1.87
Scaf1Q5U4C3 Gm22743-201ENSMUST00000083445 133 ntBASIC3.35□□□□□ -1.87
Scaf1Q5U4C3 Mir490-201ENSMUST00000093567 84 ntBASIC3.35□□□□□ -1.87
Scaf1Q5U4C3 Gm8935-201ENSMUST00000066794 2798 ntBASIC3.35□□□□□ -1.87
Scaf1Q5U4C3 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
Scaf1Q5U4C3 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Scaf1Q5U4C3 Gm24718-201ENSMUST00000157521 136 ntBASIC3.34□□□□□ -1.87
Scaf1Q5U4C3 Gm22708-201ENSMUST00000158987 103 ntBASIC3.34□□□□□ -1.87
Scaf1Q5U4C3 Mir8090-201ENSMUST00000185078 136 ntBASIC3.34□□□□□ -1.87
Scaf1Q5U4C3 CT025689.3-201ENSMUST00000223817 301 ntBASIC3.34□□□□□ -1.87
Scaf1Q5U4C3 Mir423-201ENSMUST00000083584 109 ntBASIC3.34□□□□□ -1.87
Scaf1Q5U4C3 Gm22576-201ENSMUST00000083733 104 ntBASIC3.34□□□□□ -1.87
Scaf1Q5U4C3 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.88
Scaf1Q5U4C3 Gm42718-201ENSMUST00000197319 2681 ntBASIC3.33□□□□□ -1.88
Scaf1Q5U4C3 Gm26420-201ENSMUST00000104273 103 ntBASIC3.33□□□□□ -1.88
Scaf1Q5U4C3 Gm26091-201ENSMUST00000122704 82 ntBASIC3.33□□□□□ -1.88
Scaf1Q5U4C3 Gm25060-201ENSMUST00000157374 130 ntBASIC3.33□□□□□ -1.88
Scaf1Q5U4C3 Gm25866-201ENSMUST00000158245 112 ntBASIC3.33□□□□□ -1.88
Scaf1Q5U4C3 Gm25994-201ENSMUST00000175392 101 ntBASIC3.33□□□□□ -1.88
Scaf1Q5U4C3 Gm27959-201ENSMUST00000185172 111 ntBASIC3.33□□□□□ -1.88
Scaf1Q5U4C3 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC3.33□□□□□ -1.88
Scaf1Q5U4C3 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
Scaf1Q5U4C3 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Scaf1Q5U4C3 Gm14568-201ENSMUST00000119321 294 ntBASIC3.32□□□□□ -1.88
Scaf1Q5U4C3 Gm14946-201ENSMUST00000119859 296 ntBASIC3.32□□□□□ -1.88
Scaf1Q5U4C3 Gm22227-201ENSMUST00000157356 259 ntBASIC3.32□□□□□ -1.88
Scaf1Q5U4C3 Gm27792-201ENSMUST00000184031 115 ntBASIC3.32□□□□□ -1.88
Scaf1Q5U4C3 Gm22683-201ENSMUST00000082854 137 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 171.9 ms