Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Gm16307-201ENSMUST00000161269 210 ntBASIC-0.07□□□□□ -2.42
Trav2Q5R1I9 Mir5124a-201ENSMUST00000175528 72 ntBASIC-0.07□□□□□ -2.42
Trav2Q5R1I9 Gm28597-201ENSMUST00000187664 666 ntBASIC-0.07□□□□□ -2.42
Trav2Q5R1I9 Gm44352-201ENSMUST00000196358 110 ntBASIC-0.07□□□□□ -2.42
Trav2Q5R1I9 AC116589.3-202ENSMUST00000221770 649 ntBASIC-0.07□□□□□ -2.42
Trav2Q5R1I9 AC116589.6-201ENSMUST00000222252 649 ntBASIC-0.07□□□□□ -2.42
Trav2Q5R1I9 Gm25930-201ENSMUST00000082785 107 ntBASIC-0.07□□□□□ -2.42
Trav2Q5R1I9 Gm22294-201ENSMUST00000083308 104 ntBASIC-0.07□□□□□ -2.42
Trav2Q5R1I9 Gm25579-201ENSMUST00000083407 106 ntBASIC-0.07□□□□□ -2.42
Trav2Q5R1I9 Mir200a-201ENSMUST00000083466 90 ntBASIC-0.07□□□□□ -2.42
Trav2Q5R1I9 Mir411-201ENSMUST00000083543 82 ntBASIC-0.07□□□□□ -2.42
Trav2Q5R1I9 Gm23142-201ENSMUST00000101848 105 ntBASIC-0.08□□□□□ -2.42
Trav2Q5R1I9 Gm26240-201ENSMUST00000101893 105 ntBASIC-0.08□□□□□ -2.42
Trav2Q5R1I9 Snord69-201ENSMUST00000104024 80 ntBASIC-0.08□□□□□ -2.42
Trav2Q5R1I9 Gm25878-201ENSMUST00000104327 93 ntBASIC-0.08□□□□□ -2.42
Trav2Q5R1I9 Gm14039-201ENSMUST00000118705 101 ntBASIC-0.08□□□□□ -2.42
Trav2Q5R1I9 Gm24903-201ENSMUST00000158131 126 ntBASIC-0.08□□□□□ -2.42
Trav2Q5R1I9 AC192616.1-201ENSMUST00000221922 132 ntBASIC-0.08□□□□□ -2.42
Trav2Q5R1I9 Gm25110-201ENSMUST00000116684 121 ntBASIC-0.09□□□□□ -2.42
Trav2Q5R1I9 Gm25775-201ENSMUST00000116716 121 ntBASIC-0.09□□□□□ -2.42
Trav2Q5R1I9 Gm24795-201ENSMUST00000116737 121 ntBASIC-0.09□□□□□ -2.42
Trav2Q5R1I9 Gm25171-201ENSMUST00000116926 121 ntBASIC-0.09□□□□□ -2.42
Trav2Q5R1I9 Gm14293-201ENSMUST00000118528 577 ntBASIC-0.09□□□□□ -2.42
Trav2Q5R1I9 Gm11407-201ENSMUST00000120362 1058 ntBASIC-0.09□□□□□ -2.42
Trav2Q5R1I9 Gm11522-201ENSMUST00000120533 176 ntBASIC-0.09□□□□□ -2.42
Trav2Q5R1I9 Gm22520-201ENSMUST00000158269 129 ntBASIC-0.09□□□□□ -2.42
Trav2Q5R1I9 Gm24547-201ENSMUST00000158649 149 ntBASIC-0.09□□□□□ -2.42
Trav2Q5R1I9 Gm24345-201ENSMUST00000158706 124 ntBASIC-0.09□□□□□ -2.42
Trav2Q5R1I9 Gm22466-201ENSMUST00000175278 69 ntBASIC-0.09□□□□□ -2.42
Trav2Q5R1I9 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC-0.09□□□□□ -2.42
Trav2Q5R1I9 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC-0.09□□□□□ -2.42
Trav2Q5R1I9 AC098718.2-201ENSMUST00000226822 285 ntBASIC-0.09□□□□□ -2.42
Trav2Q5R1I9 Gm23989-201ENSMUST00000117030 66 ntBASIC-0.1□□□□□ -2.43
Trav2Q5R1I9 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC-0.1□□□□□ -2.43
Trav2Q5R1I9 Gm11904-201ENSMUST00000120562 248 ntBASIC-0.1□□□□□ -2.43
Trav2Q5R1I9 Gm23759-201ENSMUST00000158351 268 ntBASIC-0.1□□□□□ -2.43
Trav2Q5R1I9 Gm23821-201ENSMUST00000158738 106 ntBASIC-0.1□□□□□ -2.43
Trav2Q5R1I9 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC-0.1□□□□□ -2.43
Trav2Q5R1I9 Gm23660-201ENSMUST00000178362 79 ntBASIC-0.1□□□□□ -2.43
Trav2Q5R1I9 Gm24088-201ENSMUST00000179100 79 ntBASIC-0.1□□□□□ -2.43
Trav2Q5R1I9 Gm23191-201ENSMUST00000179147 107 ntBASIC-0.1□□□□□ -2.43
Trav2Q5R1I9 Gm26180-201ENSMUST00000179942 107 ntBASIC-0.1□□□□□ -2.43
Trav2Q5R1I9 Mir7010-201ENSMUST00000183464 63 ntBASIC-0.1□□□□□ -2.43
Trav2Q5R1I9 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC-0.1□□□□□ -2.43
Trav2Q5R1I9 Mir382-201ENSMUST00000083494 76 ntBASIC-0.1□□□□□ -2.43
Trav2Q5R1I9 Mir451a-201ENSMUST00000093557 72 ntBASIC-0.1□□□□□ -2.43
Trav2Q5R1I9 Gm23665-201ENSMUST00000158054 62 ntBASIC-0.11□□□□□ -2.43
Trav2Q5R1I9 Gm23921-201ENSMUST00000175258 107 ntBASIC-0.11□□□□□ -2.43
Trav2Q5R1I9 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC-0.11□□□□□ -2.43
Trav2Q5R1I9 Mir7j-201ENSMUST00000184427 122 ntBASIC-0.11□□□□□ -2.43
Trav2Q5R1I9 AC166358.10-201ENSMUST00000220556 144 ntBASIC-0.11□□□□□ -2.43
Trav2Q5R1I9 CT030645.1-201ENSMUST00000224020 231 ntBASIC-0.11□□□□□ -2.43
Trav2Q5R1I9 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC-0.11□□□□□ -2.43
Trav2Q5R1I9 Gm23097-201ENSMUST00000083448 105 ntBASIC-0.11□□□□□ -2.43
Trav2Q5R1I9 n-R5s183-201ENSMUST00000083939 115 ntBASIC-0.11□□□□□ -2.43
Trav2Q5R1I9 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC-0.12□□□□□ -2.43
Trav2Q5R1I9 Gm23492-201ENSMUST00000116837 115 ntBASIC-0.12□□□□□ -2.43
Trav2Q5R1I9 Gm15899-201ENSMUST00000128586 238 ntBASIC-0.12□□□□□ -2.43
Trav2Q5R1I9 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC-0.12□□□□□ -2.43
Trav2Q5R1I9 Gm24467-201ENSMUST00000157887 126 ntBASIC-0.12□□□□□ -2.43
Trav2Q5R1I9 Gm26073-201ENSMUST00000179906 127 ntBASIC-0.12□□□□□ -2.43
Trav2Q5R1I9 Gm28001-201ENSMUST00000183561 117 ntBASIC-0.12□□□□□ -2.43
Trav2Q5R1I9 Mir6350-201ENSMUST00000183639 105 ntBASIC-0.12□□□□□ -2.43
Trav2Q5R1I9 Gm27410-201ENSMUST00000183851 115 ntBASIC-0.12□□□□□ -2.43
Trav2Q5R1I9 Gm28669-201ENSMUST00000188400 100 ntBASIC-0.12□□□□□ -2.43
Trav2Q5R1I9 AC102369.1-201ENSMUST00000218415 373 ntBASIC-0.12□□□□□ -2.43
Trav2Q5R1I9 Gm22048-201ENSMUST00000104721 89 ntBASIC-0.13□□□□□ -2.43
Trav2Q5R1I9 Gm22883-201ENSMUST00000157376 106 ntBASIC-0.13□□□□□ -2.43
Trav2Q5R1I9 Gm24847-201ENSMUST00000158032 108 ntBASIC-0.13□□□□□ -2.43
Trav2Q5R1I9 Gm23379-201ENSMUST00000180026 107 ntBASIC-0.13□□□□□ -2.43
Trav2Q5R1I9 Gm6003-201ENSMUST00000187903 463 ntBASIC-0.13□□□□□ -2.43
Trav2Q5R1I9 Snora20-201ENSMUST00000082703 128 ntBASIC-0.13□□□□□ -2.43
Trav2Q5R1I9 Gm25781-201ENSMUST00000122527 84 ntBASIC-0.14□□□□□ -2.43
Trav2Q5R1I9 Gm25885-201ENSMUST00000157779 109 ntBASIC-0.14□□□□□ -2.43
Trav2Q5R1I9 Gm23036-201ENSMUST00000157885 99 ntBASIC-0.14□□□□□ -2.43
Trav2Q5R1I9 Gm24500-201ENSMUST00000158447 124 ntBASIC-0.14□□□□□ -2.43
Trav2Q5R1I9 Gm24575-201ENSMUST00000175502 77 ntBASIC-0.14□□□□□ -2.43
Trav2Q5R1I9 Gm23148-201ENSMUST00000180367 107 ntBASIC-0.14□□□□□ -2.43
Trav2Q5R1I9 Mir7229-201ENSMUST00000197062 53 ntBASIC-0.14□□□□□ -2.43
Trav2Q5R1I9 Gm45544-201ENSMUST00000211130 88 ntBASIC-0.14□□□□□ -2.43
Trav2Q5R1I9 Gm25258-201ENSMUST00000083049 107 ntBASIC-0.14□□□□□ -2.43
Trav2Q5R1I9 Gm13518-201ENSMUST00000120018 233 ntBASIC-0.15□□□□□ -2.43
Trav2Q5R1I9 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC-0.16□□□□□ -2.44
Trav2Q5R1I9 Gm25497-201ENSMUST00000104425 132 ntBASIC-0.16□□□□□ -2.44
Trav2Q5R1I9 Gm26090-201ENSMUST00000157897 128 ntBASIC-0.16□□□□□ -2.44
Trav2Q5R1I9 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC-0.16□□□□□ -2.44
Trav2Q5R1I9 Mir7661-201ENSMUST00000197023 61 ntBASIC-0.16□□□□□ -2.44
Trav2Q5R1I9 Gm44811-201ENSMUST00000209120 228 ntBASIC-0.16□□□□□ -2.44
Trav2Q5R1I9 Gm23625-201ENSMUST00000082457 100 ntBASIC-0.16□□□□□ -2.44
Trav2Q5R1I9 Gm24037-201ENSMUST00000082871 180 ntBASIC-0.16□□□□□ -2.44
Trav2Q5R1I9 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC-0.17□□□□□ -2.44
Trav2Q5R1I9 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC-0.17□□□□□ -2.44
Trav2Q5R1I9 Gm44057-201ENSMUST00000204547 96 ntBASIC-0.17□□□□□ -2.44
Trav2Q5R1I9 Gm45374-201ENSMUST00000211388 136 ntBASIC-0.17□□□□□ -2.44
Trav2Q5R1I9 Gm22576-201ENSMUST00000083733 104 ntBASIC-0.17□□□□□ -2.44
Trav2Q5R1I9 Gm3867-201ENSMUST00000086108 279 ntBASIC-0.17□□□□□ -2.44
Trav2Q5R1I9 Gm26329-201ENSMUST00000093723 110 ntBASIC-0.17□□□□□ -2.44
Trav2Q5R1I9 Gm23749-201ENSMUST00000104223 131 ntBASIC-0.18□□□□□ -2.44
Trav2Q5R1I9 Gm22021-201ENSMUST00000104353 107 ntBASIC-0.18□□□□□ -2.44
Trav2Q5R1I9 Gm23101-201ENSMUST00000157550 137 ntBASIC-0.18□□□□□ -2.44
Retrieved 100 of 76,532 protein–RNA pairs in 130.9 ms