Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm25749-201ENSMUST00000175485 111 ntBASIC1.16□□□□□ -2.22
Trim40Q3UWA4 Gm25935-201ENSMUST00000178746 107 ntBASIC1.16□□□□□ -2.22
Trim40Q3UWA4 Mir7026-201ENSMUST00000184384 67 ntBASIC1.16□□□□□ -2.22
Trim40Q3UWA4 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC1.16□□□□□ -2.22
Trim40Q3UWA4 Gm23423-201ENSMUST00000082782 106 ntBASIC1.16□□□□□ -2.22
Trim40Q3UWA4 Mir146-201ENSMUST00000083667 65 ntBASIC1.16□□□□□ -2.22
Trim40Q3UWA4 Gm25409-201ENSMUST00000083764 131 ntBASIC1.16□□□□□ -2.22
Trim40Q3UWA4 AC160984.1-201ENSMUST00000225855 3154 ntBASIC1.16□□□□□ -2.22
Trim40Q3UWA4 Gm25538-201ENSMUST00000101943 107 ntBASIC1.15□□□□□ -2.23
Trim40Q3UWA4 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
Trim40Q3UWA4 Mir466b-8-201ENSMUST00000103883 86 ntBASIC1.15□□□□□ -2.23
Trim40Q3UWA4 Gm24835-201ENSMUST00000116777 111 ntBASIC1.15□□□□□ -2.23
Trim40Q3UWA4 Gm22051-201ENSMUST00000117002 127 ntBASIC1.15□□□□□ -2.23
Trim40Q3UWA4 Gm12449-201ENSMUST00000117572 234 ntBASIC1.15□□□□□ -2.23
Trim40Q3UWA4 Gm11856-201ENSMUST00000118712 276 ntBASIC1.15□□□□□ -2.23
Trim40Q3UWA4 Gm13588-201ENSMUST00000120026 135 ntBASIC1.15□□□□□ -2.23
Trim40Q3UWA4 Gm22477-201ENSMUST00000122569 316 ntBASIC1.15□□□□□ -2.23
Trim40Q3UWA4 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.15□□□□□ -2.23
Trim40Q3UWA4 Gm26049-201ENSMUST00000157313 108 ntBASIC1.15□□□□□ -2.23
Trim40Q3UWA4 Gm25015-201ENSMUST00000158400 128 ntBASIC1.15□□□□□ -2.23
Trim40Q3UWA4 Gm20630-201ENSMUST00000177387 551 ntBASIC1.15□□□□□ -2.23
Trim40Q3UWA4 Mir669k-201ENSMUST00000177742 127 ntBASIC1.15□□□□□ -2.23
Trim40Q3UWA4 Gm22129-201ENSMUST00000179034 107 ntBASIC1.15□□□□□ -2.23
Trim40Q3UWA4 Gm25673-201ENSMUST00000179957 127 ntBASIC1.15□□□□□ -2.23
Trim40Q3UWA4 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
Trim40Q3UWA4 Mir466e-201ENSMUST00000198862 84 ntBASIC1.15□□□□□ -2.23
Trim40Q3UWA4 Mir466c-1-201ENSMUST00000200654 84 ntBASIC1.15□□□□□ -2.23
Trim40Q3UWA4 Gm36189-201ENSMUST00000204113 523 ntBASIC1.15□□□□□ -2.23
Trim40Q3UWA4 Mir384-201ENSMUST00000083565 88 ntBASIC1.15□□□□□ -2.23
Trim40Q3UWA4 Mir211-201ENSMUST00000083651 106 ntBASIC1.15□□□□□ -2.23
Trim40Q3UWA4 Gm8935-202ENSMUST00000105727 1959 ntBASIC1.15□□□□□ -2.23
Trim40Q3UWA4 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
Trim40Q3UWA4 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.15□□□□□ -2.23
Trim40Q3UWA4 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
Trim40Q3UWA4 Gm23996-201ENSMUST00000158062 131 ntBASIC1.14□□□□□ -2.23
Trim40Q3UWA4 Gm26363-201ENSMUST00000158866 83 ntBASIC1.14□□□□□ -2.23
Trim40Q3UWA4 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC1.14□□□□□ -2.23
Trim40Q3UWA4 Gm23419-201ENSMUST00000175523 84 ntBASIC1.14□□□□□ -2.23
Trim40Q3UWA4 Mir6350-201ENSMUST00000183639 105 ntBASIC1.14□□□□□ -2.23
Trim40Q3UWA4 Gm28344-201ENSMUST00000185704 279 ntBASIC1.14□□□□□ -2.23
Trim40Q3UWA4 Gm43199-201ENSMUST00000200019 307 ntBASIC1.14□□□□□ -2.23
Trim40Q3UWA4 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC1.14□□□□□ -2.23
Trim40Q3UWA4 Gm24494-201ENSMUST00000083804 81 ntBASIC1.14□□□□□ -2.23
Trim40Q3UWA4 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
Trim40Q3UWA4 Snord89-201ENSMUST00000104516 110 ntBASIC1.13□□□□□ -2.23
Trim40Q3UWA4 Snord19-201ENSMUST00000104609 76 ntBASIC1.13□□□□□ -2.23
Trim40Q3UWA4 Gm14923-201ENSMUST00000118270 155 ntBASIC1.13□□□□□ -2.23
Trim40Q3UWA4 Gm22888-201ENSMUST00000158640 77 ntBASIC1.13□□□□□ -2.23
Trim40Q3UWA4 Gm24634-201ENSMUST00000158672 107 ntBASIC1.13□□□□□ -2.23
Trim40Q3UWA4 Gm22929-201ENSMUST00000175517 107 ntBASIC1.13□□□□□ -2.23
Trim40Q3UWA4 Gm27476-201ENSMUST00000183366 104 ntBASIC1.13□□□□□ -2.23
Trim40Q3UWA4 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.13□□□□□ -2.23
Trim40Q3UWA4 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC1.13□□□□□ -2.23
Trim40Q3UWA4 Gm45508-201ENSMUST00000209298 299 ntBASIC1.13□□□□□ -2.23
Trim40Q3UWA4 AC154390.1-201ENSMUST00000225629 277 ntBASIC1.13□□□□□ -2.23
Trim40Q3UWA4 Gm24762-201ENSMUST00000083689 104 ntBASIC1.13□□□□□ -2.23
Trim40Q3UWA4 Gm24523-201ENSMUST00000083965 132 ntBASIC1.13□□□□□ -2.23
Trim40Q3UWA4 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
Trim40Q3UWA4 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
Trim40Q3UWA4 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
Trim40Q3UWA4 Gm23655-201ENSMUST00000122627 105 ntBASIC1.12□□□□□ -2.23
Trim40Q3UWA4 Gm23106-201ENSMUST00000157554 101 ntBASIC1.12□□□□□ -2.23
Trim40Q3UWA4 Gm25558-201ENSMUST00000158083 106 ntBASIC1.12□□□□□ -2.23
Trim40Q3UWA4 Gm26213-201ENSMUST00000158582 110 ntBASIC1.12□□□□□ -2.23
Trim40Q3UWA4 Gm25831-201ENSMUST00000158924 163 ntBASIC1.12□□□□□ -2.23
Trim40Q3UWA4 Gm23141-201ENSMUST00000178682 94 ntBASIC1.12□□□□□ -2.23
Trim40Q3UWA4 Gm28669-201ENSMUST00000188400 100 ntBASIC1.12□□□□□ -2.23
Trim40Q3UWA4 CT033781.2-201ENSMUST00000221113 153 ntBASIC1.12□□□□□ -2.23
Trim40Q3UWA4 AC154328.1-201ENSMUST00000225875 307 ntBASIC1.12□□□□□ -2.23
Trim40Q3UWA4 Gm22980-201ENSMUST00000082608 70 ntBASIC1.12□□□□□ -2.23
Trim40Q3UWA4 Gm23299-201ENSMUST00000082708 79 ntBASIC1.12□□□□□ -2.23
Trim40Q3UWA4 BC022960-201ENSMUST00000119987 1815 ntBASIC1.11□□□□□ -2.23
Trim40Q3UWA4 Gm25783-201ENSMUST00000122525 190 ntBASIC1.11□□□□□ -2.23
Trim40Q3UWA4 Mir1904-201ENSMUST00000122702 80 ntBASIC1.11□□□□□ -2.23
Trim40Q3UWA4 Gm26089-201ENSMUST00000157898 107 ntBASIC1.11□□□□□ -2.23
Trim40Q3UWA4 Gm25654-201ENSMUST00000158467 88 ntBASIC1.11□□□□□ -2.23
Trim40Q3UWA4 Gm20391-201ENSMUST00000174722 106 ntBASIC1.11□□□□□ -2.23
Trim40Q3UWA4 Gm44921-201ENSMUST00000205290 301 ntBASIC1.11□□□□□ -2.23
Trim40Q3UWA4 AC129085.1-201ENSMUST00000225263 165 ntBASIC1.11□□□□□ -2.23
Trim40Q3UWA4 Gm25855-201ENSMUST00000082787 72 ntBASIC1.11□□□□□ -2.23
Trim40Q3UWA4 Gm24522-201ENSMUST00000083964 108 ntBASIC1.11□□□□□ -2.23
Trim40Q3UWA4 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC1.1□□□□□ -2.23
Trim40Q3UWA4 Gm22785-201ENSMUST00000104087 132 ntBASIC1.1□□□□□ -2.23
Trim40Q3UWA4 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC1.1□□□□□ -2.23
Trim40Q3UWA4 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC1.1□□□□□ -2.23
Trim40Q3UWA4 Gm23584-201ENSMUST00000157655 129 ntBASIC1.1□□□□□ -2.23
Trim40Q3UWA4 Trav5d-3-201ENSMUST00000170041 270 ntBASIC1.1□□□□□ -2.23
Trim40Q3UWA4 Gm25485-201ENSMUST00000104120 132 ntBASIC1.09□□□□□ -2.23
Trim40Q3UWA4 Gm26293-201ENSMUST00000104170 84 ntBASIC1.09□□□□□ -2.23
Trim40Q3UWA4 Mir880-201ENSMUST00000104809 78 ntBASIC1.09□□□□□ -2.23
Trim40Q3UWA4 n-R5s73-201ENSMUST00000122508 107 ntBASIC1.09□□□□□ -2.23
Trim40Q3UWA4 Gm24902-201ENSMUST00000158126 123 ntBASIC1.09□□□□□ -2.23
Trim40Q3UWA4 Gm6003-201ENSMUST00000187903 463 ntBASIC1.09□□□□□ -2.23
Trim40Q3UWA4 Gm22744-201ENSMUST00000083444 65 ntBASIC1.09□□□□□ -2.23
Trim40Q3UWA4 Mir301b-201ENSMUST00000102333 97 ntBASIC1.08□□□□□ -2.24
Trim40Q3UWA4 Gm24867-201ENSMUST00000104161 107 ntBASIC1.08□□□□□ -2.24
Trim40Q3UWA4 Gm24588-201ENSMUST00000116696 83 ntBASIC1.08□□□□□ -2.24
Trim40Q3UWA4 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC1.08□□□□□ -2.24
Trim40Q3UWA4 Gm25663-201ENSMUST00000157698 135 ntBASIC1.08□□□□□ -2.24
Trim40Q3UWA4 Gm22163-201ENSMUST00000158408 135 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 76,532 protein–RNA pairs in 132.3 ms