Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm26400-201ENSMUST00000175012 85 ntBASIC0.29□□□□□ -2.36
Upf3bQ3ULL6 Gm45508-201ENSMUST00000209298 299 ntBASIC0.29□□□□□ -2.36
Upf3bQ3ULL6 AC109212.1-201ENSMUST00000215561 427 ntBASIC0.29□□□□□ -2.36
Upf3bQ3ULL6 Mir196a-2-201ENSMUST00000083554 85 ntBASIC0.29□□□□□ -2.36
Upf3bQ3ULL6 Mir30c-2-201ENSMUST00000083633 84 ntBASIC0.29□□□□□ -2.36
Upf3bQ3ULL6 Gm26107-201ENSMUST00000083972 107 ntBASIC0.29□□□□□ -2.36
Upf3bQ3ULL6 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.28□□□□□ -2.36
Upf3bQ3ULL6 Mir1197-201ENSMUST00000117037 120 ntBASIC0.28□□□□□ -2.36
Upf3bQ3ULL6 Gm6985-201ENSMUST00000121255 271 ntBASIC0.28□□□□□ -2.36
Upf3bQ3ULL6 Gm24504-201ENSMUST00000157679 100 ntBASIC0.28□□□□□ -2.36
Upf3bQ3ULL6 Gm25450-201ENSMUST00000179144 107 ntBASIC0.28□□□□□ -2.36
Upf3bQ3ULL6 Gm28330-201ENSMUST00000190353 171 ntBASIC0.28□□□□□ -2.36
Upf3bQ3ULL6 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC0.28□□□□□ -2.36
Upf3bQ3ULL6 Gm45616-201ENSMUST00000211711 319 ntBASIC0.28□□□□□ -2.36
Upf3bQ3ULL6 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.28□□□□□ -2.36
Upf3bQ3ULL6 Mir224-201ENSMUST00000083608 82 ntBASIC0.28□□□□□ -2.36
Upf3bQ3ULL6 n-R5s183-201ENSMUST00000083939 115 ntBASIC0.28□□□□□ -2.36
Upf3bQ3ULL6 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.28□□□□□ -2.37
Upf3bQ3ULL6 Mir709-201ENSMUST00000102190 88 ntBASIC0.27□□□□□ -2.37
Upf3bQ3ULL6 Gm23531-201ENSMUST00000104567 68 ntBASIC0.27□□□□□ -2.37
Upf3bQ3ULL6 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC0.27□□□□□ -2.37
Upf3bQ3ULL6 Gm26274-201ENSMUST00000157103 321 ntBASIC0.27□□□□□ -2.37
Upf3bQ3ULL6 Gm24909-201ENSMUST00000157290 280 ntBASIC0.27□□□□□ -2.37
Upf3bQ3ULL6 Gm24000-201ENSMUST00000158063 89 ntBASIC0.27□□□□□ -2.37
Upf3bQ3ULL6 Gm24345-201ENSMUST00000158706 124 ntBASIC0.27□□□□□ -2.37
Upf3bQ3ULL6 Gm27607-201ENSMUST00000185162 122 ntBASIC0.27□□□□□ -2.37
Upf3bQ3ULL6 Gm43367-201ENSMUST00000199986 625 ntBASIC0.27□□□□□ -2.37
Upf3bQ3ULL6 Gm43472-201ENSMUST00000200175 154 ntBASIC0.27□□□□□ -2.37
Upf3bQ3ULL6 AC116589.4-201ENSMUST00000222390 216 ntBASIC0.27□□□□□ -2.37
Upf3bQ3ULL6 AC162857.1-201ENSMUST00000226614 400 ntBASIC0.27□□□□□ -2.37
Upf3bQ3ULL6 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
Upf3bQ3ULL6 Gm22983-201ENSMUST00000158308 104 ntBASIC0.26□□□□□ -2.37
Upf3bQ3ULL6 Gm23853-201ENSMUST00000158375 104 ntBASIC0.26□□□□□ -2.37
Upf3bQ3ULL6 Gm26073-201ENSMUST00000179906 127 ntBASIC0.26□□□□□ -2.37
Upf3bQ3ULL6 Gm24208-201ENSMUST00000082783 135 ntBASIC0.26□□□□□ -2.37
Upf3bQ3ULL6 Mir710-201ENSMUST00000102088 110 ntBASIC0.25□□□□□ -2.37
Upf3bQ3ULL6 Gm13518-201ENSMUST00000120018 233 ntBASIC0.25□□□□□ -2.37
Upf3bQ3ULL6 Gm14574-201ENSMUST00000120644 279 ntBASIC0.25□□□□□ -2.37
Upf3bQ3ULL6 Gm24847-201ENSMUST00000158032 108 ntBASIC0.25□□□□□ -2.37
Upf3bQ3ULL6 Gm23194-201ENSMUST00000158813 105 ntBASIC0.25□□□□□ -2.37
Upf3bQ3ULL6 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
Upf3bQ3ULL6 Gm44211-201ENSMUST00000204867 145 ntBASIC0.25□□□□□ -2.37
Upf3bQ3ULL6 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC0.24□□□□□ -2.37
Upf3bQ3ULL6 Gm12837-201ENSMUST00000120131 373 ntBASIC0.24□□□□□ -2.37
Upf3bQ3ULL6 Gm25718-201ENSMUST00000158632 118 ntBASIC0.24□□□□□ -2.37
Upf3bQ3ULL6 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC0.24□□□□□ -2.37
Upf3bQ3ULL6 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC0.24□□□□□ -2.37
Upf3bQ3ULL6 AC154747.1-201ENSMUST00000225265 239 ntBASIC0.24□□□□□ -2.37
Upf3bQ3ULL6 Mir451a-201ENSMUST00000093557 72 ntBASIC0.24□□□□□ -2.37
Upf3bQ3ULL6 Gm44560-201ENSMUST00000207816 3115 ntBASIC0.24□□□□□ -2.37
Upf3bQ3ULL6 Gm12785-201ENSMUST00000122052 172 ntBASIC0.23□□□□□ -2.37
Upf3bQ3ULL6 Gm25318-201ENSMUST00000122554 314 ntBASIC0.23□□□□□ -2.37
Upf3bQ3ULL6 Gm23101-201ENSMUST00000157550 137 ntBASIC0.23□□□□□ -2.37
Upf3bQ3ULL6 Gm25558-201ENSMUST00000158083 106 ntBASIC0.23□□□□□ -2.37
Upf3bQ3ULL6 Gm27475-201ENSMUST00000183420 61 ntBASIC0.23□□□□□ -2.37
Upf3bQ3ULL6 Gm27717-201ENSMUST00000183933 151 ntBASIC0.23□□□□□ -2.37
Upf3bQ3ULL6 Mir7065-201ENSMUST00000185110 61 ntBASIC0.23□□□□□ -2.37
Upf3bQ3ULL6 Mir465d-201ENSMUST00000196314 58 ntBASIC0.23□□□□□ -2.37
Upf3bQ3ULL6 AC145736.2-201ENSMUST00000216305 365 ntBASIC0.23□□□□□ -2.37
Upf3bQ3ULL6 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC0.22□□□□□ -2.37
Upf3bQ3ULL6 Gm23180-201ENSMUST00000158686 125 ntBASIC0.22□□□□□ -2.37
Upf3bQ3ULL6 Gm23474-201ENSMUST00000158884 75 ntBASIC0.22□□□□□ -2.37
Upf3bQ3ULL6 Mir1933-201ENSMUST00000158930 88 ntBASIC0.22□□□□□ -2.37
Upf3bQ3ULL6 Gm7654-201ENSMUST00000186738 683 ntBASIC0.22□□□□□ -2.37
Upf3bQ3ULL6 Gm28669-201ENSMUST00000188400 100 ntBASIC0.22□□□□□ -2.37
Upf3bQ3ULL6 Gm43238-201ENSMUST00000196463 359 ntBASIC0.22□□□□□ -2.37
Upf3bQ3ULL6 Gm45541-201ENSMUST00000210443 54 ntBASIC0.22□□□□□ -2.37
Upf3bQ3ULL6 AL935138.1-201ENSMUST00000215309 196 ntBASIC0.22□□□□□ -2.37
Upf3bQ3ULL6 AC136457.1-201ENSMUST00000224195 156 ntBASIC0.22□□□□□ -2.37
Upf3bQ3ULL6 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.21□□□□□ -2.38
Upf3bQ3ULL6 Gm23994-201ENSMUST00000158059 88 ntBASIC0.21□□□□□ -2.38
Upf3bQ3ULL6 Gm23022-201ENSMUST00000158768 180 ntBASIC0.21□□□□□ -2.38
Upf3bQ3ULL6 Scarna3a-201ENSMUST00000158911 140 ntBASIC0.21□□□□□ -2.38
Upf3bQ3ULL6 Gm23059-201ENSMUST00000158978 107 ntBASIC0.21□□□□□ -2.38
Upf3bQ3ULL6 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC0.21□□□□□ -2.38
Upf3bQ3ULL6 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC0.21□□□□□ -2.38
Upf3bQ3ULL6 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC0.2□□□□□ -2.38
Upf3bQ3ULL6 Gm22088-201ENSMUST00000158341 117 ntBASIC0.2□□□□□ -2.38
Upf3bQ3ULL6 Gm23416-201ENSMUST00000175520 95 ntBASIC0.2□□□□□ -2.38
Upf3bQ3ULL6 Gm22801-201ENSMUST00000175624 84 ntBASIC0.2□□□□□ -2.38
Upf3bQ3ULL6 Gm38050-201ENSMUST00000191904 238 ntBASIC0.2□□□□□ -2.38
Upf3bQ3ULL6 Mir6896-201ENSMUST00000198033 73 ntBASIC0.2□□□□□ -2.38
Upf3bQ3ULL6 AC132437.1-201ENSMUST00000218308 320 ntBASIC0.2□□□□□ -2.38
Upf3bQ3ULL6 AC159625.1-201ENSMUST00000220994 2625 ntBASIC0.2□□□□□ -2.38
Upf3bQ3ULL6 Gm25878-201ENSMUST00000104327 93 ntBASIC0.19□□□□□ -2.38
Upf3bQ3ULL6 Gm23838-201ENSMUST00000158067 162 ntBASIC0.19□□□□□ -2.38
Upf3bQ3ULL6 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC0.19□□□□□ -2.38
Upf3bQ3ULL6 AC132615.1-201ENSMUST00000213873 255 ntBASIC0.19□□□□□ -2.38
Upf3bQ3ULL6 Mir669f-201ENSMUST00000103850 121 ntBASIC0.18□□□□□ -2.38
Upf3bQ3ULL6 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC0.18□□□□□ -2.38
Upf3bQ3ULL6 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC0.18□□□□□ -2.38
Upf3bQ3ULL6 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC0.18□□□□□ -2.38
Upf3bQ3ULL6 Gm23536-201ENSMUST00000157541 134 ntBASIC0.18□□□□□ -2.38
Upf3bQ3ULL6 Gm24015-201ENSMUST00000157725 232 ntBASIC0.18□□□□□ -2.38
Upf3bQ3ULL6 Gm22555-201ENSMUST00000157801 62 ntBASIC0.18□□□□□ -2.38
Upf3bQ3ULL6 Mir6365-201ENSMUST00000183990 101 ntBASIC0.18□□□□□ -2.38
Upf3bQ3ULL6 Gm45544-201ENSMUST00000211130 88 ntBASIC0.18□□□□□ -2.38
Upf3bQ3ULL6 Gm45471-201ENSMUST00000211270 281 ntBASIC0.18□□□□□ -2.38
Upf3bQ3ULL6 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.18□□□□□ -2.38
Upf3bQ3ULL6 Gm24527-201ENSMUST00000082920 107 ntBASIC0.18□□□□□ -2.38
Retrieved 100 of 76,532 protein–RNA pairs in 128.4 ms